RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 SH3TC1Q8TE82 1336 aa9.49□□□□□ -0.89
CDK5RAP3-209ENST00000578663 IGF2BP3O00425 579 aaKnown RBP eCLIP9.48□□□□□ -0.89
CDK5RAP3-209ENST00000578663 MTFR1Q15390 333 aa9.48□□□□□ -0.89
CDK5RAP3-209ENST00000578663 FAM109BQ6ICB4 259 aaPredicted RBP9.48□□□□□ -0.89
CDK5RAP3-209ENST00000578663 NLRP10Q86W26 655 aa9.48□□□□□ -0.89
CDK5RAP3-209ENST00000578663 AGBL3Q8NEM8 1001 aa9.48□□□□□ -0.89
CDK5RAP3-209ENST00000578663 FAM161BQ96MY7 647 aa9.48□□□□□ -0.89
CDK5RAP3-209ENST00000578663 U2AF1L5P0DN76 240 aaPredicted RBP9.47□□□□□ -0.89
CDK5RAP3-209ENST00000578663 HCLS1P14317 486 aaPredicted RBP9.47□□□□□ -0.89
CDK5RAP3-209ENST00000578663 U2AF1Q01081 240 aaKnown RBP eCLIP9.47□□□□□ -0.89
CDK5RAP3-209ENST00000578663 TJAP1Q5JTD0 557 aa9.47□□□□□ -0.89
CDK5RAP3-209ENST00000578663 RBM26Q5T8P6 1007 aaKnown RBP9.47□□□□□ -0.89
CDK5RAP3-209ENST00000578663 ANGEL2Q5VTE6 544 aaKnown RBP9.47□□□□□ -0.89
CDK5RAP3-209ENST00000578663 IFNL1Q8IU54 200 aa9.47□□□□□ -0.89
CDK5RAP3-209ENST00000578663 TDHQ8IZJ6 230 aa9.47□□□□□ -0.89
CDK5RAP3-209ENST00000578663 DLG5Q8TDM6 1919 aa9.46□□□□□ -0.89
CDK5RAP3-209ENST00000578663 EVI5O60447 810 aa9.46□□□□□ -0.9
CDK5RAP3-209ENST00000578663 SP3Q02447 781 aa9.46□□□□□ -0.9
CDK5RAP3-209ENST00000578663 CRHR2Q13324 411 aa9.46□□□□□ -0.9
CDK5RAP3-209ENST00000578663 PDIA6Q15084 440 aa9.46□□□□□ -0.9
CDK5RAP3-209ENST00000578663 SF3B3Q15393 1217 aaKnown RBP9.46□□□□□ -0.9
CDK5RAP3-209ENST00000578663 MIS18AQ9NYP9 233 aa9.46□□□□□ -0.9
CDK5RAP3-209ENST00000578663 POLLQ9UGP5 575 aa9.46□□□□□ -0.9
CDK5RAP3-209ENST00000578663 TRMT112Q9UI30 125 aaKnown RBP9.46□□□□□ -0.9
CDK5RAP3-209ENST00000578663 NSFL1CQ9UNZ2 370 aaKnown RBP9.46□□□□□ -0.9
CDK5RAP3-209ENST00000578663 C6orf229H3BNL8 230 aa9.45□□□□□ -0.9
CDK5RAP3-209ENST00000578663 GJA8P48165 433 aa9.45□□□□□ -0.9
CDK5RAP3-209ENST00000578663 SCARF1Q14162 830 aa9.45□□□□□ -0.9
CDK5RAP3-209ENST00000578663 SPRYD7Q5W111 196 aa9.45□□□□□ -0.9
CDK5RAP3-209ENST00000578663 RSBN1LQ6PCB5 846 aaPredicted RBP9.45□□□□□ -0.9
CDK5RAP3-209ENST00000578663 GMLQ99445 158 aa9.45□□□□□ -0.9
CDK5RAP3-209ENST00000578663 CDX2Q99626 313 aaPredicted RBP9.45□□□□□ -0.9
CDK5RAP3-209ENST00000578663 PODXL2Q9NZ53 605 aa9.45□□□□□ -0.9
CDK5RAP3-209ENST00000578663 TCF20Q9UGU0 1960 aaKnown RBP9.44□□□□□ -0.9
CDK5RAP3-209ENST00000578663 CACNA1GO43497 2377 aa9.44□□□□□ -0.9
CDK5RAP3-209ENST00000578663 RIMBP2O15034 1052 aa9.44□□□□□ -0.9
CDK5RAP3-209ENST00000578663 NF2P35240 595 aa9.44□□□□□ -0.9
CDK5RAP3-209ENST00000578663 INHBEP58166 350 aa9.44□□□□□ -0.9
CDK5RAP3-209ENST00000578663 GPSM2P81274 684 aa9.44□□□□□ -0.9
CDK5RAP3-209ENST00000578663 TCIRG1Q13488 830 aa9.44□□□□□ -0.9
CDK5RAP3-209ENST00000578663 DOK7Q18PE1 504 aa9.44□□□□□ -0.9
CDK5RAP3-209ENST00000578663 TBC1D16Q8TBP0 767 aa9.44□□□□□ -0.9
CDK5RAP3-209ENST00000578663 P2RX7Q99572 595 aaKnown RBP9.44□□□□□ -0.9
CDK5RAP3-209ENST00000578663 ZC3H12CQ9C0D7 883 aaKnown RBP9.44□□□□□ -0.9
CDK5RAP3-209ENST00000578663 MYOZ2Q9NPC6 264 aa9.44□□□□□ -0.9
CDK5RAP3-209ENST00000578663 KCNQ5Q9NR82 932 aa9.44□□□□□ -0.9
CDK5RAP3-209ENST00000578663 COL1A1P02452 1464 aaPredicted RBP9.43□□□□□ -0.9
CDK5RAP3-209ENST00000578663 NEFMP07197 916 aa9.43□□□□□ -0.9
CDK5RAP3-209ENST00000578663 USP17L8P0C7I0 530 aa9.43□□□□□ -0.9
CDK5RAP3-209ENST00000578663 MMP14P50281 582 aa9.43□□□□□ -0.9
CDK5RAP3-209ENST00000578663 PTPN12Q05209 780 aaKnown RBP9.43□□□□□ -0.9
CDK5RAP3-209ENST00000578663 PRAMEF18Q5VWM3 479 aa9.43□□□□□ -0.9
CDK5RAP3-209ENST00000578663 CNKSR2Q8WXI2 1034 aa9.43□□□□□ -0.9
CDK5RAP3-209ENST00000578663 CELF1Q92879 486 aaKnown RBP9.43□□□□□ -0.9
CDK5RAP3-209ENST00000578663 SCAF8Q9UPN6 1271 aaKnown RBP9.43□□□□□ -0.9
CDK5RAP3-209ENST00000578663 COL4A1P02462 1669 aa9.42□□□□□ -0.9
CDK5RAP3-209ENST00000578663 MANSC4A6NHS7 340 aaPredicted RBP9.42□□□□□ -0.9
CDK5RAP3-209ENST00000578663 FARP2O94887 1054 aaPredicted RBP9.42□□□□□ -0.9
CDK5RAP3-209ENST00000578663 PROSER3Q2NL68 480 aa9.42□□□□□ -0.9
CDK5RAP3-209ENST00000578663 LDLRAD1Q5T700 205 aa9.42□□□□□ -0.9
CDK5RAP3-209ENST00000578663 ARMC9Q7Z3E5 817 aa9.42□□□□□ -0.9
CDK5RAP3-209ENST00000578663 THUMPD2Q9BTF0 503 aaKnown RBP9.42□□□□□ -0.9
CDK5RAP3-209ENST00000578663 BABAM1Q9NWV8 329 aa9.42□□□□□ -0.9
CDK5RAP3-209ENST00000578663 HCN4Q9Y3Q4 1203 aa9.42□□□□□ -0.9
CDK5RAP3-209ENST00000578663 BAHCC1Q9P281 2608 aa9.42□□□□□ -0.9
CDK5RAP3-209ENST00000578663 PKD1L2Q7Z442 2459 aa9.42□□□□□ -0.9
CDK5RAP3-209ENST00000578663 UNCXA6NJT0 531 aa9.41□□□□□ -0.9
CDK5RAP3-209ENST00000578663 G3V3G9 751 aa9.41□□□□□ -0.9
CDK5RAP3-209ENST00000578663 ECM2O94769 699 aaPredicted RBP9.41□□□□□ -0.9
CDK5RAP3-209ENST00000578663 UFL1O94874 794 aa9.41□□□□□ -0.9
CDK5RAP3-209ENST00000578663 GJB1P08034 283 aa9.41□□□□□ -0.9
CDK5RAP3-209ENST00000578663 ZBTB48P10074 688 aaPredicted RBP9.41□□□□□ -0.9
CDK5RAP3-209ENST00000578663 MAGEA10P43363 369 aaPredicted RBP9.41□□□□□ -0.9
CDK5RAP3-209ENST00000578663 RPS8P62241 208 aaKnown RBP9.41□□□□□ -0.9
CDK5RAP3-209ENST00000578663 TTLL12Q14166 644 aaPredicted RBP9.41□□□□□ -0.9
CDK5RAP3-209ENST00000578663 NFE2L2Q16236 605 aa9.41□□□□□ -0.9
CDK5RAP3-209ENST00000578663 DCAF8Q5TAQ9 597 aa9.41□□□□□ -0.9
CDK5RAP3-209ENST00000578663 COPS6Q7L5N1 327 aa9.41□□□□□ -0.9
CDK5RAP3-209ENST00000578663 PODNQ7Z5L7 613 aa9.41□□□□□ -0.9
CDK5RAP3-209ENST00000578663 NKX2-3Q8TAU0 364 aa9.41□□□□□ -0.9
CDK5RAP3-209ENST00000578663 XAGE3Q8WTP9 111 aa9.41□□□□□ -0.9
CDK5RAP3-209ENST00000578663 GGA1Q9UJY5 639 aa9.41□□□□□ -0.9
CDK5RAP3-209ENST00000578663 ZMYND8Q9ULU4 1186 aaPredicted RBP9.41□□□□□ -0.9
CDK5RAP3-209ENST00000578663 MYO3BQ8WXR4 1341 aa9.4□□□□□ -0.9
CDK5RAP3-209ENST00000578663 USP17L3A6NCW0 530 aa9.4□□□□□ -0.9
CDK5RAP3-209ENST00000578663 USP17L4A6NCW7 530 aa9.4□□□□□ -0.9
CDK5RAP3-209ENST00000578663 HSP90B1P14625 803 aaKnown RBP9.4□□□□□ -0.9
CDK5RAP3-209ENST00000578663 MRE11P49959 708 aa9.4□□□□□ -0.9
CDK5RAP3-209ENST00000578663 USP17L1Q7RTZ2 530 aa9.4□□□□□ -0.9
CDK5RAP3-209ENST00000578663 APOBEC3FQ8IUX4 373 aaKnown RBP9.4□□□□□ -0.9
CDK5RAP3-209ENST00000578663 USP38Q8NB14 1042 aa9.4□□□□□ -0.9
CDK5RAP3-209ENST00000578663 MYLIPQ8WY64 445 aa9.4□□□□□ -0.9
CDK5RAP3-209ENST00000578663 LRFN3Q9BTN0 628 aa9.4□□□□□ -0.9
CDK5RAP3-209ENST00000578663 ISCA1Q9BUE6 129 aa9.4□□□□□ -0.9
CDK5RAP3-209ENST00000578663 TSPYL4Q9UJ04 414 aa9.4□□□□□ -0.9
CDK5RAP3-209ENST00000578663 ZDBF2Q9HCK1 2354 aa9.39□□□□□ -0.91
CDK5RAP3-209ENST00000578663 OTOFQ9HC10 1997 aa9.39□□□□□ -0.91
CDK5RAP3-209ENST00000578663 XDHP47989 1333 aa9.39□□□□□ -0.91
CDK5RAP3-209ENST00000578663 WNT10BO00744 389 aa9.39□□□□□ -0.91
CDK5RAP3-209ENST00000578663 ANXA1P04083 346 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms