RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 RASSF10A6NK89 507 aa28.95■■■□□ 2.22
VAPA-205ENST00000578314 EGFRP00533 1210 aa28.95■■■□□ 2.22
VAPA-205ENST00000578314 TBC1D10BQ4KMP7 808 aaPredicted RBP28.95■■■□□ 2.22
VAPA-205ENST00000578314 TAF7LQ5H9L4 462 aa28.95■■■□□ 2.22
VAPA-205ENST00000578314 C15orf52Q6ZUT6 534 aaKnown RBP28.95■■■□□ 2.22
VAPA-205ENST00000578314 TAF5LO75529 589 aa28.94■■■□□ 2.22
VAPA-205ENST00000578314 KLRK1P26718 216 aa28.94■■■□□ 2.22
VAPA-205ENST00000578314 KCNJ4P48050 445 aa28.94■■■□□ 2.22
VAPA-205ENST00000578314 ZNF280AP59817 542 aaPredicted RBP28.94■■■□□ 2.22
VAPA-205ENST00000578314 CST9Q5W186 159 aa28.94■■■□□ 2.22
VAPA-205ENST00000578314 CDC37L1Q7L3B6 337 aa28.94■■■□□ 2.22
VAPA-205ENST00000578314 HELBQ8NG08 1087 aaPredicted RBP28.94■■■□□ 2.22
VAPA-205ENST00000578314 GLIS2Q9BZE0 524 aaPredicted RBP28.94■■■□□ 2.22
VAPA-205ENST00000578314 NOB1Q9ULX3 412 aaKnown RBP28.94■■■□□ 2.22
VAPA-205ENST00000578314 IRS2Q9Y4H2 1338 aa28.94■■■□□ 2.22
VAPA-205ENST00000578314 RARSP54136 660 aaKnown RBP28.93■■■□□ 2.22
VAPA-205ENST00000578314 DEFB115Q30KQ5 88 aa28.93■■■□□ 2.22
VAPA-205ENST00000578314 BICC1Q9H694 974 aaKnown RBP28.93■■■□□ 2.22
VAPA-205ENST00000578314 ABT1Q9ULW3 272 aaKnown RBP28.93■■■□□ 2.22
VAPA-205ENST00000578314 TRPM7Q96QT4 1865 aa28.93■■■□□ 2.22
VAPA-205ENST00000578314 SPEF2Q9C093 1822 aa28.92■■■□□ 2.22
VAPA-205ENST00000578314 SNAP23O00161 211 aa28.92■■■□□ 2.22
VAPA-205ENST00000578314 DACT2Q5SW24 774 aa28.92■■■□□ 2.22
VAPA-205ENST00000578314 RBM26Q5T8P6 1007 aaKnown RBP28.92■■■□□ 2.22
VAPA-205ENST00000578314 STRIP1Q5VSL9 837 aa28.92■■■□□ 2.22
VAPA-205ENST00000578314 ANKRD44Q8N8A2 993 aa28.92■■■□□ 2.22
VAPA-205ENST00000578314 CNNM1Q9NRU3 951 aa28.92■■■□□ 2.22
VAPA-205ENST00000578314 USP17L8P0C7I0 530 aa28.9■■■□□ 2.22
VAPA-205ENST00000578314 KIF4BQ2VIQ3 1234 aa28.9■■■□□ 2.22
VAPA-205ENST00000578314 API5Q9BZZ5 524 aaKnown RBP28.9■■■□□ 2.22
VAPA-205ENST00000578314 CD209Q9NNX6 404 aa28.89■■■□□ 2.22
VAPA-205ENST00000578314 USP48Q86UV5 1035 aa28.88■■■□□ 2.21
VAPA-205ENST00000578314 TTLL5Q6EMB2 1281 aa28.87■■■□□ 2.21
VAPA-205ENST00000578314 ARHGAP45Q92619 1136 aa28.87■■■□□ 2.21
VAPA-205ENST00000578314 PUS3Q9BZE2 481 aaKnown RBP28.87■■■□□ 2.21
VAPA-205ENST00000578314 RIPOR2Q9Y4F9 1068 aa28.87■■■□□ 2.21
VAPA-205ENST00000578314 MYO3BQ8WXR4 1341 aa28.87■■■□□ 2.21
VAPA-205ENST00000578314 PLIN1O60240 522 aa28.86■■■□□ 2.21
VAPA-205ENST00000578314 CELF2O95319 508 aaKnown RBP28.86■■■□□ 2.21
VAPA-205ENST00000578314 HNRNPUQ00839 825 aaKnown RBP eCLIP28.86■■■□□ 2.21
VAPA-205ENST00000578314 TNS4Q8IZW8 715 aa28.86■■■□□ 2.21
VAPA-205ENST00000578314 DCPSQ96C86 337 aaKnown RBP28.86■■■□□ 2.21
VAPA-205ENST00000578314 MXD3Q9BW11 206 aa28.86■■■□□ 2.21
VAPA-205ENST00000578314 MYOZ2Q9NPC6 264 aa28.86■■■□□ 2.21
VAPA-205ENST00000578314 TLL2Q9Y6L7 1015 aa28.86■■■□□ 2.21
VAPA-205ENST00000578314 WDR33Q9C0J8 1336 aaKnown RBP28.86■■■□□ 2.21
VAPA-205ENST00000578314 FOXN1O15353 648 aa28.85■■■□□ 2.21
VAPA-205ENST00000578314 MMP14P50281 582 aa28.85■■■□□ 2.21
VAPA-205ENST00000578314 KRT26Q7Z3Y9 468 aa28.85■■■□□ 2.21
VAPA-205ENST00000578314 IL1R1P14778 569 aa28.84■■■□□ 2.21
VAPA-205ENST00000578314 GTF2IP78347 998 aa28.84■■■□□ 2.21
VAPA-205ENST00000578314 UBE4AQ14139 1066 aa28.84■■■□□ 2.21
VAPA-205ENST00000578314 SCARF1Q14162 830 aa28.84■■■□□ 2.21
VAPA-205ENST00000578314 FBXW7Q969H0 707 aa28.84■■■□□ 2.21
VAPA-205ENST00000578314 PSME4Q14997 1843 aa28.84■■■□□ 2.21
VAPA-205ENST00000578314 ZNF804AQ7Z570 1209 aa28.83■■■□□ 2.21
VAPA-205ENST00000578314 AIDAQ96BJ3 306 aa28.83■■■□□ 2.21
VAPA-205ENST00000578314 MROH5Q6ZUA9 1318 aa28.83■■■□□ 2.21
VAPA-205ENST00000578314 KIF16BQ96L93 1317 aa28.83■■■□□ 2.21
VAPA-205ENST00000578314 SAPCD2Q86UD0 394 aa28.82■■■□□ 2.2
VAPA-205ENST00000578314 OGFOD1Q8N543 542 aa28.82■■■□□ 2.2
VAPA-205ENST00000578314 WBP1LQ9NX94 342 aa28.82■■■□□ 2.2
VAPA-205ENST00000578314 GGA3Q9NZ52 723 aa28.82■■■□□ 2.2
VAPA-205ENST00000578314 ASTN2O75129 1339 aaPredicted RBP28.82■■■□□ 2.2
VAPA-205ENST00000578314 THSD7BQ9C0I4 1608 aa28.81■■■□□ 2.2
VAPA-205ENST00000578314 DLK2Q6UY11 383 aa28.81■■■□□ 2.2
VAPA-205ENST00000578314 LRRC24Q50LG9 513 aa28.8■■■□□ 2.2
VAPA-205ENST00000578314 CAPNS2Q96L46 248 aa28.8■■■□□ 2.2
VAPA-205ENST00000578314 ZNF408Q9H9D4 720 aa28.8■■■□□ 2.2
VAPA-205ENST00000578314 ADM5C9JUS6 153 aa28.79■■■□□ 2.2
VAPA-205ENST00000578314 UBTFL1P0CB47 393 aaPredicted RBP28.79■■■□□ 2.2
VAPA-205ENST00000578314 ECE1P42892 770 aa28.79■■■□□ 2.2
VAPA-205ENST00000578314 ANGEL2Q5VTE6 544 aaKnown RBP28.79■■■□□ 2.2
VAPA-205ENST00000578314 INTS3Q68E01 1043 aaKnown RBP28.79■■■□□ 2.2
VAPA-205ENST00000578314 PAXIP1Q6ZW49 1069 aaPredicted RBP28.79■■■□□ 2.2
VAPA-205ENST00000578314 SULF1Q8IWU6 871 aa28.79■■■□□ 2.2
VAPA-205ENST00000578314 HHIPL1Q96JK4 782 aa28.79■■■□□ 2.2
VAPA-205ENST00000578314 IPO8O15397 1037 aaKnown RBP28.78■■■□□ 2.2
VAPA-205ENST00000578314 RFX5P48382 616 aaPredicted RBP28.78■■■□□ 2.2
VAPA-205ENST00000578314 CTCFP49711 727 aaPredicted RBP28.78■■■□□ 2.2
VAPA-205ENST00000578314 CYP4F22Q6NT55 531 aa28.78■■■□□ 2.2
VAPA-205ENST00000578314 KLHDC4Q8TBB5 520 aa28.78■■■□□ 2.2
VAPA-205ENST00000578314 HDAC5Q9UQL6 1122 aa28.78■■■□□ 2.2
VAPA-205ENST00000578314 PITPNM2Q9BZ72 1349 aa28.77■■■□□ 2.2
VAPA-205ENST00000578314 BCAR3O75815 825 aa28.77■■■□□ 2.2
VAPA-205ENST00000578314 SASH1O94885 1247 aa28.77■■■□□ 2.2
VAPA-205ENST00000578314 FKBP1AP62942 108 aaKnown RBP28.77■■■□□ 2.2
VAPA-205ENST00000578314 MAP2K1Q02750 393 aaPredicted RBP28.77■■■□□ 2.2
VAPA-205ENST00000578314 FAM84BQ96KN1 310 aaPredicted RBP28.77■■■□□ 2.2
VAPA-205ENST00000578314 NBPF9Q3BBW0 867 aa28.76■■■□□ 2.19
VAPA-205ENST00000578314 METTL24Q5JXM2 366 aa28.76■■■□□ 2.19
VAPA-205ENST00000578314 KIAA0825Q8IV33 1275 aa28.76■■■□□ 2.19
VAPA-205ENST00000578314 CERS5Q8N5B7 392 aa28.76■■■□□ 2.19
VAPA-205ENST00000578314 VGLL2Q8N8G2 317 aa28.76■■■□□ 2.19
VAPA-205ENST00000578314 PRDM10Q9NQV6 1147 aa28.76■■■□□ 2.19
VAPA-205ENST00000578314 HDAC9Q9UKV0 1011 aa28.76■■■□□ 2.19
VAPA-205ENST00000578314 A0A1B0GUL6 1792 aa28.75■■■□□ 2.19
VAPA-205ENST00000578314 WNT10BO00744 389 aa28.75■■■□□ 2.19
VAPA-205ENST00000578314 PDE8BO95263 885 aa28.75■■■□□ 2.19
VAPA-205ENST00000578314 HIBADHP31937 336 aaKnown RBP28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms