RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 TBC1D10BQ4KMP7 808 aaPredicted RBP16.13■□□□□ 0.17
CCDC57-211ENST00000578187 TTLL11Q8NHH1 800 aa16.13■□□□□ 0.17
CCDC57-211ENST00000578187 HHIPL1Q96JK4 782 aa16.13■□□□□ 0.17
CCDC57-211ENST00000578187 GPR101Q96P66 508 aaPredicted RBP16.13■□□□□ 0.17
CCDC57-211ENST00000578187 NOB1Q9ULX3 412 aaKnown RBP16.13■□□□□ 0.17
CCDC57-211ENST00000578187 UTYO14607 1347 aa16.13■□□□□ 0.17
CCDC57-211ENST00000578187 THSD7BQ9C0I4 1608 aa16.12■□□□□ 0.17
CCDC57-211ENST00000578187 CYP4F22Q6NT55 531 aa16.12■□□□□ 0.17
CCDC57-211ENST00000578187 SAMD7Q7Z3H4 446 aa16.12■□□□□ 0.17
CCDC57-211ENST00000578187 SAPCD2Q86UD0 394 aa16.12■□□□□ 0.17
CCDC57-211ENST00000578187 ARHGAP45Q92619 1136 aa16.12■□□□□ 0.17
CCDC57-211ENST00000578187 API5Q9BZZ5 524 aaKnown RBP16.12■□□□□ 0.17
CCDC57-211ENST00000578187 BSDC1Q9NW68 430 aaPredicted RBP16.12■□□□□ 0.17
CCDC57-211ENST00000578187 VIL1P09327 827 aaKnown RBP16.11■□□□□ 0.17
CCDC57-211ENST00000578187 MAP2K2P36507 400 aa16.11■□□□□ 0.17
CCDC57-211ENST00000578187 KIF4BQ2VIQ3 1234 aa16.11■□□□□ 0.17
CCDC57-211ENST00000578187 RBM26Q5T8P6 1007 aaKnown RBP16.11■□□□□ 0.17
CCDC57-211ENST00000578187 KRT26Q7Z3Y9 468 aa16.11■□□□□ 0.17
CCDC57-211ENST00000578187 PODNQ7Z5L7 613 aa16.11■□□□□ 0.17
CCDC57-211ENST00000578187 USP48Q86UV5 1035 aa16.11■□□□□ 0.17
CCDC57-211ENST00000578187 AGBL3Q8NEM8 1001 aa16.11■□□□□ 0.17
CCDC57-211ENST00000578187 GREM2Q9H772 168 aa16.11■□□□□ 0.17
CCDC57-211ENST00000578187 SHTN1A0MZ66 631 aa16.1■□□□□ 0.17
CCDC57-211ENST00000578187 BCAR3O75815 825 aa16.1■□□□□ 0.17
CCDC57-211ENST00000578187 CSF1RP07333 972 aa16.1■□□□□ 0.17
CCDC57-211ENST00000578187 LBX1P52954 281 aa16.1■□□□□ 0.17
CCDC57-211ENST00000578187 RSBN1LQ6PCB5 846 aaPredicted RBP16.1■□□□□ 0.17
CCDC57-211ENST00000578187 SULF1Q8IWU6 871 aa16.1■□□□□ 0.17
CCDC57-211ENST00000578187 MPHOSPH8Q99549 860 aa16.1■□□□□ 0.17
CCDC57-211ENST00000578187 KCNQ5Q9NR82 932 aa16.1■□□□□ 0.17
CCDC57-211ENST00000578187 C9orf78Q9NZ63 289 aaPredicted RBP16.1■□□□□ 0.17
CCDC57-211ENST00000578187 MED23Q9ULK4 1368 aa16.1■□□□□ 0.17
CCDC57-211ENST00000578187 USP17L3A6NCW0 530 aa16.09■□□□□ 0.17
CCDC57-211ENST00000578187 USP17L4A6NCW7 530 aa16.09■□□□□ 0.17
CCDC57-211ENST00000578187 NBPF7P0C2Y1 421 aaPredicted RBP16.09■□□□□ 0.17
CCDC57-211ENST00000578187 CCT4P50991 539 aaKnown RBP16.09■□□□□ 0.17
CCDC57-211ENST00000578187 FOXO4P98177 505 aa16.09■□□□□ 0.17
CCDC57-211ENST00000578187 FAM161AQ3B820 660 aa16.09■□□□□ 0.17
CCDC57-211ENST00000578187 USP17L1Q7RTZ2 530 aa16.09■□□□□ 0.17
CCDC57-211ENST00000578187 MINPP1Q9UNW1 487 aa16.09■□□□□ 0.17
CCDC57-211ENST00000578187 ZNF609O15014 1411 aa16.09■□□□□ 0.17
CCDC57-211ENST00000578187 CA12O43570 354 aa16.08■□□□□ 0.16
CCDC57-211ENST00000578187 C2orf69Q8N8R5 385 aa16.08■□□□□ 0.16
CCDC57-211ENST00000578187 ANKRD2Q9GZV1 360 aa16.08■□□□□ 0.16
CCDC57-211ENST00000578187 LEMD3Q9Y2U8 911 aa16.08■□□□□ 0.16
CCDC57-211ENST00000578187 PSME4Q14997 1843 aa16.08■□□□□ 0.16
CCDC57-211ENST00000578187 IPO8O15397 1037 aaKnown RBP16.07■□□□□ 0.16
CCDC57-211ENST00000578187 USP17L8P0C7I0 530 aa16.07■□□□□ 0.16
CCDC57-211ENST00000578187 HSPA8P11142 646 aaKnown RBP16.07■□□□□ 0.16
CCDC57-211ENST00000578187 TRIM27P14373 513 aa16.07■□□□□ 0.16
CCDC57-211ENST00000578187 ITGA6P23229 1130 aa16.07■□□□□ 0.16
CCDC57-211ENST00000578187 KCNJ4P48050 445 aa16.07■□□□□ 0.16
CCDC57-211ENST00000578187 HUNKP57058 714 aa16.07■□□□□ 0.16
CCDC57-211ENST00000578187 EPHA10Q5JZY3 1008 aa16.07■□□□□ 0.16
CCDC57-211ENST00000578187 ATF7IPQ6VMQ6 1270 aa16.07■□□□□ 0.16
CCDC57-211ENST00000578187 OGFOD1Q8N543 542 aa16.07■□□□□ 0.16
CCDC57-211ENST00000578187 FBXW7Q969H0 707 aa16.07■□□□□ 0.16
CCDC57-211ENST00000578187 KAZALD1Q96I82 304 aa16.07■□□□□ 0.16
CCDC57-211ENST00000578187 SUCLG2Q96I99 432 aa16.07■□□□□ 0.16
CCDC57-211ENST00000578187 USP44Q9H0E7 712 aa16.07■□□□□ 0.16
CCDC57-211ENST00000578187 GGA3Q9NZ52 723 aa16.07■□□□□ 0.16
CCDC57-211ENST00000578187 MYO3BQ8WXR4 1341 aa16.07■□□□□ 0.16
CCDC57-211ENST00000578187 SCN9AQ15858 1988 aa16.06■□□□□ 0.16
CCDC57-211ENST00000578187 ANKRD18BA2A2Z9 1011 aa16.06■□□□□ 0.16
CCDC57-211ENST00000578187 EGFRP00533 1210 aa16.06■□□□□ 0.16
CCDC57-211ENST00000578187 NOGQ13253 232 aa16.06■□□□□ 0.16
CCDC57-211ENST00000578187 COA1Q9GZY4 146 aa16.06■□□□□ 0.16
CCDC57-211ENST00000578187 GBA2Q9HCG7 927 aaPredicted RBP16.06■□□□□ 0.16
CCDC57-211ENST00000578187 ADM5C9JUS6 153 aa16.05■□□□□ 0.16
CCDC57-211ENST00000578187 AOC2O75106 756 aa16.05■□□□□ 0.16
CCDC57-211ENST00000578187 ZNF280AP59817 542 aaPredicted RBP16.05■□□□□ 0.16
CCDC57-211ENST00000578187 RABL6Q3YEC7 729 aaPredicted RBP16.05■□□□□ 0.16
CCDC57-211ENST00000578187 INTS3Q68E01 1043 aaKnown RBP16.05■□□□□ 0.16
CCDC57-211ENST00000578187 LMBR1LQ6UX01 489 aa16.05■□□□□ 0.16
CCDC57-211ENST00000578187 MYOZ2Q9NPC6 264 aa16.05■□□□□ 0.16
CCDC57-211ENST00000578187 CHMP3Q9Y3E7 222 aa16.05■□□□□ 0.16
CCDC57-211ENST00000578187 ZNF804BA4D1E1 1349 aa16.04■□□□□ 0.16
CCDC57-211ENST00000578187 MMP14P50281 582 aa16.04■□□□□ 0.16
CCDC57-211ENST00000578187 IFIT5Q13325 482 aaKnown RBP16.04■□□□□ 0.16
CCDC57-211ENST00000578187 SCARF1Q14162 830 aa16.04■□□□□ 0.16
CCDC57-211ENST00000578187 ZKSCAN2Q63HK3 967 aa16.04■□□□□ 0.16
CCDC57-211ENST00000578187 FRAT1Q92837 279 aaPredicted RBP16.04■□□□□ 0.16
CCDC57-211ENST00000578187 CCDC102AQ96A19 550 aa16.04■□□□□ 0.16
CCDC57-211ENST00000578187 TNNQ9UQP3 1299 aa16.04■□□□□ 0.16
CCDC57-211ENST00000578187 PITPNM2Q9BZ72 1349 aa16.03■□□□□ 0.16
CCDC57-211ENST00000578187 STRIP1Q5VSL9 837 aa16.03■□□□□ 0.16
CCDC57-211ENST00000578187 ANGEL2Q5VTE6 544 aaKnown RBP16.03■□□□□ 0.16
CCDC57-211ENST00000578187 RGMBQ6NW40 437 aa16.03■□□□□ 0.16
CCDC57-211ENST00000578187 ANKRD44Q8N8A2 993 aa16.03■□□□□ 0.16
CCDC57-211ENST00000578187 TAF7LQ5H9L4 462 aa16.02■□□□□ 0.16
CCDC57-211ENST00000578187 BICC1Q9H694 974 aaKnown RBP16.02■□□□□ 0.16
CCDC57-211ENST00000578187 HDAC9Q9UKV0 1011 aa16.02■□□□□ 0.16
CCDC57-211ENST00000578187 ZNF646O15015 1829 aaPredicted RBP16.02■□□□□ 0.16
CCDC57-211ENST00000578187 ZNF157P51786 506 aaPredicted RBP16.01■□□□□ 0.15
CCDC57-211ENST00000578187 CHRNDQ07001 517 aa16.01■□□□□ 0.15
CCDC57-211ENST00000578187 C1QBPQ07021 282 aaKnown RBP16.01■□□□□ 0.15
CCDC57-211ENST00000578187 CCDC57Q2TAC2 916 aa16.01■□□□□ 0.15
CCDC57-211ENST00000578187 CDCA5Q96FF9 252 aa16.01■□□□□ 0.15
CCDC57-211ENST00000578187 GMLQ99445 158 aa16.01■□□□□ 0.15
CCDC57-211ENST00000578187 UBTFL1P0CB47 393 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms