RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 PSMD14O00487 310 aa27.71■■■□□ 2.03
SMARCD2-206ENST00000577990 PLIN1O60240 522 aa27.71■■■□□ 2.03
SMARCD2-206ENST00000577990 KLRK1P26718 216 aa27.71■■■□□ 2.03
SMARCD2-206ENST00000577990 GMPSP49915 693 aaPredicted RBP27.71■■■□□ 2.03
SMARCD2-206ENST00000577990 LRRC24Q50LG9 513 aa27.71■■■□□ 2.03
SMARCD2-206ENST00000577990 TXNRD3Q86VQ6 643 aa27.71■■■□□ 2.03
SMARCD2-206ENST00000577990 KCNQ5Q9NR82 932 aa27.71■■■□□ 2.03
SMARCD2-206ENST00000577990 SNAP23O00161 211 aa27.7■■■□□ 2.02
SMARCD2-206ENST00000577990 ITGBL1O95965 494 aaPredicted RBP27.7■■■□□ 2.02
SMARCD2-206ENST00000577990 GNAI2P04899 355 aa27.7■■■□□ 2.02
SMARCD2-206ENST00000577990 MS4A1P11836 297 aa27.7■■■□□ 2.02
SMARCD2-206ENST00000577990 PODNQ7Z5L7 613 aa27.7■■■□□ 2.02
SMARCD2-206ENST00000577990 CREBZFQ9NS37 354 aa27.7■■■□□ 2.02
SMARCD2-206ENST00000577990 PTPN12Q05209 780 aaKnown RBP27.69■■■□□ 2.02
SMARCD2-206ENST00000577990 C15orf52Q6ZUT6 534 aaKnown RBP27.69■■■□□ 2.02
SMARCD2-206ENST00000577990 COA1Q9GZY4 146 aa27.69■■■□□ 2.02
SMARCD2-206ENST00000577990 PSME4Q14997 1843 aa27.69■■■□□ 2.02
SMARCD2-206ENST00000577990 METTL24Q5JXM2 366 aa27.68■■■□□ 2.02
SMARCD2-206ENST00000577990 PANK1Q8TE04 598 aa27.68■■■□□ 2.02
SMARCD2-206ENST00000577990 GPRC5DQ9NZD1 345 aa27.68■■■□□ 2.02
SMARCD2-206ENST00000577990 MKRN1Q9UHC7 482 aaKnown RBP27.68■■■□□ 2.02
SMARCD2-206ENST00000577990 IRS2Q9Y4H2 1338 aa27.67■■■□□ 2.02
SMARCD2-206ENST00000577990 EYA2O00167 538 aa27.67■■■□□ 2.02
SMARCD2-206ENST00000577990 MTX1Q13505 466 aa27.67■■■□□ 2.02
SMARCD2-206ENST00000577990 CNTROBQ8N137 903 aa27.67■■■□□ 2.02
SMARCD2-206ENST00000577990 UBE4AQ14139 1066 aa27.66■■■□□ 2.02
SMARCD2-206ENST00000577990 ZBTB12Q9Y330 459 aaPredicted RBP27.66■■■□□ 2.02
SMARCD2-206ENST00000577990 VIL1P09327 827 aaKnown RBP27.65■■■□□ 2.02
SMARCD2-206ENST00000577990 RPS12P25398 132 aaKnown RBP27.65■■■□□ 2.02
SMARCD2-206ENST00000577990 FBXO3Q9UK99 471 aa27.65■■■□□ 2.02
SMARCD2-206ENST00000577990 SRGAP3O43295 1099 aa27.64■■■□□ 2.02
SMARCD2-206ENST00000577990 VGLL2Q8N8G2 317 aa27.64■■■□□ 2.02
SMARCD2-206ENST00000577990 DPF2Q92785 391 aa27.64■■■□□ 2.02
SMARCD2-206ENST00000577990 SIL1Q9H173 461 aa27.64■■■□□ 2.02
SMARCD2-206ENST00000577990 USP17L3A6NCW0 530 aa27.63■■■□□ 2.01
SMARCD2-206ENST00000577990 USP17L4A6NCW7 530 aa27.63■■■□□ 2.01
SMARCD2-206ENST00000577990 ZBTB7BO15156 539 aaPredicted RBP27.63■■■□□ 2.01
SMARCD2-206ENST00000577990 CIAO1O76071 339 aa27.63■■■□□ 2.01
SMARCD2-206ENST00000577990 USP17L1Q7RTZ2 530 aa27.63■■■□□ 2.01
SMARCD2-206ENST00000577990 ZNF804AQ7Z570 1209 aa27.63■■■□□ 2.01
SMARCD2-206ENST00000577990 COPRSQ9NQ92 184 aa27.63■■■□□ 2.01
SMARCD2-206ENST00000577990 ADARB2Q9NS39 739 aaKnown RBP27.63■■■□□ 2.01
SMARCD2-206ENST00000577990 PA2G4Q9UQ80 394 aaKnown RBP27.63■■■□□ 2.01
SMARCD2-206ENST00000577990 TRPM7Q96QT4 1865 aa27.63■■■□□ 2.01
SMARCD2-206ENST00000577990 ZNF609O15014 1411 aa27.62■■■□□ 2.01
SMARCD2-206ENST00000577990 TMEM88BA6NKF7 163 aa27.62■■■□□ 2.01
SMARCD2-206ENST00000577990 PDE8BO95263 885 aa27.62■■■□□ 2.01
SMARCD2-206ENST00000577990 RSBN1LQ6PCB5 846 aaPredicted RBP27.62■■■□□ 2.01
SMARCD2-206ENST00000577990 USP50Q70EL3 339 aaPredicted RBP27.62■■■□□ 2.01
SMARCD2-206ENST00000577990 ATG9AQ7Z3C6 839 aa27.62■■■□□ 2.01
SMARCD2-206ENST00000577990 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.62■■■□□ 2.01
SMARCD2-206ENST00000577990 CD209Q9NNX6 404 aa27.62■■■□□ 2.01
SMARCD2-206ENST00000577990 CNOT7Q9UIV1 285 aaKnown RBP27.62■■■□□ 2.01
SMARCD2-206ENST00000577990 FMR1Q06787 632 aaKnown RBP eCLIP27.61■■■□□ 2.01
SMARCD2-206ENST00000577990 MICALL2Q8IY33 904 aa27.61■■■□□ 2.01
SMARCD2-206ENST00000577990 ZNF646O15015 1829 aaPredicted RBP27.6■■■□□ 2.01
SMARCD2-206ENST00000577990 SHTN1A0MZ66 631 aa27.6■■■□□ 2.01
SMARCD2-206ENST00000577990 H7C1D1 291 aa27.6■■■□□ 2.01
SMARCD2-206ENST00000577990 C1orf115Q9H7X2 142 aa27.6■■■□□ 2.01
SMARCD2-206ENST00000577990 CNTNAP1P78357 1384 aa27.6■■■□□ 2.01
SMARCD2-206ENST00000577990 IL15P40933 162 aaPredicted RBP27.59■■■□□ 2.01
SMARCD2-206ENST00000577990 MVPQ14764 893 aaKnown RBP27.59■■■□□ 2.01
SMARCD2-206ENST00000577990 PUM3Q15397 648 aaKnown RBP27.59■■■□□ 2.01
SMARCD2-206ENST00000577990 STRIP1Q5VSL9 837 aa27.59■■■□□ 2.01
SMARCD2-206ENST00000577990 AGBL3Q8NEM8 1001 aa27.59■■■□□ 2.01
SMARCD2-206ENST00000577990 FBXW7Q969H0 707 aa27.59■■■□□ 2.01
SMARCD2-206ENST00000577990 PNMA6EA0A0J9YXQ4 647 aa27.58■■■□□ 2.01
SMARCD2-206ENST00000577990 IL1R1P14778 569 aa27.58■■■□□ 2.01
SMARCD2-206ENST00000577990 DACT2Q5SW24 774 aa27.58■■■□□ 2.01
SMARCD2-206ENST00000577990 TRAF5O00463 557 aa27.57■■■□□ 2
SMARCD2-206ENST00000577990 HSPA1AP0DMV8 641 aaKnown RBP27.57■■■□□ 2
SMARCD2-206ENST00000577990 HSPA1BP0DMV9 641 aaKnown RBP27.57■■■□□ 2
SMARCD2-206ENST00000577990 TTLL5Q6EMB2 1281 aa27.57■■■□□ 2
SMARCD2-206ENST00000577990 COG6Q9Y2V7 657 aa27.57■■■□□ 2
SMARCD2-206ENST00000577990 FGFR2P21802 821 aa27.56■■■□□ 2
SMARCD2-206ENST00000577990 HIBADHP31937 336 aaKnown RBP27.56■■■□□ 2
SMARCD2-206ENST00000577990 GYG1P46976 350 aa27.56■■■□□ 2
SMARCD2-206ENST00000577990 TRPM4Q8TD43 1214 aa27.56■■■□□ 2
SMARCD2-206ENST00000577990 FAM84BQ96KN1 310 aaPredicted RBP27.56■■■□□ 2
SMARCD2-206ENST00000577990 GMLQ99445 158 aa27.56■■■□□ 2
SMARCD2-206ENST00000577990 CEP126Q9P2H0 1117 aa27.56■■■□□ 2
SMARCD2-206ENST00000577990 DDX19BQ9UMR2 479 aa27.56■■■□□ 2
SMARCD2-206ENST00000577990 IFIT1P09914 478 aaKnown RBP27.55■■■□□ 2
SMARCD2-206ENST00000577990 GTF2IP78347 998 aa27.55■■■□□ 2
SMARCD2-206ENST00000577990 PDE3AQ14432 1141 aa27.55■■■□□ 2
SMARCD2-206ENST00000577990 IFFO2Q5TF58 517 aa27.55■■■□□ 2
SMARCD2-206ENST00000577990 MYO3BQ8WXR4 1341 aa27.55■■■□□ 2
SMARCD2-206ENST00000577990 ATP8B2P98198 1209 aa27.54■■■□□ 2
SMARCD2-206ENST00000577990 LPIN2Q92539 896 aa27.54■■■□□ 2
SMARCD2-206ENST00000577990 MXD3Q9BW11 206 aa27.54■■■□□ 2
SMARCD2-206ENST00000577990 POLR2AP24928 1970 aaKnown RBP27.53■■■□□ 2
SMARCD2-206ENST00000577990 SLC5A1P13866 664 aa27.53■■■□□ 2
SMARCD2-206ENST00000577990 HIRAP54198 1017 aaPredicted RBP27.53■■■□□ 2
SMARCD2-206ENST00000577990 POLA2Q14181 598 aa27.53■■■□□ 2
SMARCD2-206ENST00000577990 CAVIN4Q5BKX8 364 aa27.53■■■□□ 2
SMARCD2-206ENST00000577990 C20orf194Q5TEA3 1177 aa27.53■■■□□ 2
SMARCD2-206ENST00000577990 SAMD7Q7Z3H4 446 aa27.53■■■□□ 2
SMARCD2-206ENST00000577990 FBXO33Q7Z6M2 555 aa27.53■■■□□ 2
SMARCD2-206ENST00000577990 VPS37DQ86XT2 251 aa27.53■■■□□ 2
SMARCD2-206ENST00000577990 USP17L8P0C7I0 530 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms