RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 TNNI3KQ59H18 835 aa15.68■□□□□ 0.1
MKS1-206ENST00000577824 FPGT-TNNI3KV9GXZ4 949 aa15.68■□□□□ 0.1
MKS1-206ENST00000577824 KDM2BQ8NHM5 1336 aa15.68■□□□□ 0.1
MKS1-206ENST00000577824 ZC3H4Q9UPT8 1303 aaKnown RBP15.68■□□□□ 0.1
MKS1-206ENST00000577824 PSME4Q14997 1843 aa15.67■□□□□ 0.1
MKS1-206ENST00000577824 SNAP23O00161 211 aa15.67■□□□□ 0.1
MKS1-206ENST00000577824 WASHC4Q2M389 1173 aa15.67■□□□□ 0.1
MKS1-206ENST00000577824 ARHGAP27Q6ZUM4 889 aa15.67■□□□□ 0.1
MKS1-206ENST00000577824 LRRCC1Q9C099 1032 aa15.67■□□□□ 0.1
MKS1-206ENST00000577824 ZNF277Q9NRM2 450 aaPredicted RBP15.67■□□□□ 0.1
MKS1-206ENST00000577824 A0A1B0GUL7 405 aa15.66■□□□□ 0.1
MKS1-206ENST00000577824 C6orf229H3BNL8 230 aa15.66■□□□□ 0.1
MKS1-206ENST00000577824 IFIT1P09914 478 aaKnown RBP15.66■□□□□ 0.1
MKS1-206ENST00000577824 SLC5A1P13866 664 aa15.66■□□□□ 0.1
MKS1-206ENST00000577824 KLRK1P26718 216 aa15.66■□□□□ 0.1
MKS1-206ENST00000577824 KCNJ4P48050 445 aa15.66■□□□□ 0.1
MKS1-206ENST00000577824 AOC3Q16853 763 aa15.66■□□□□ 0.1
MKS1-206ENST00000577824 TXNRD3Q86VQ6 643 aa15.66■□□□□ 0.1
MKS1-206ENST00000577824 PPIP5K2O43314 1243 aa15.65■□□□□ 0.1
MKS1-206ENST00000577824 GPR101Q96P66 508 aaPredicted RBP15.65■□□□□ 0.1
MKS1-206ENST00000577824 ZC3H12CQ9C0D7 883 aaKnown RBP15.65■□□□□ 0.1
MKS1-206ENST00000577824 DCAF8L1A6NGE4 600 aa15.64■□□□□ 0.09
MKS1-206ENST00000577824 CCDC88AQ3V6T2 1871 aa15.64■□□□□ 0.09
MKS1-206ENST00000577824 FBXO33Q7Z6M2 555 aa15.64■□□□□ 0.09
MKS1-206ENST00000577824 CLASRPQ8N2M8 674 aaKnown RBP15.64■□□□□ 0.09
MKS1-206ENST00000577824 EAF2Q96CJ1 260 aaPredicted RBP15.64■□□□□ 0.09
MKS1-206ENST00000577824 FAM84BQ96KN1 310 aaPredicted RBP15.64■□□□□ 0.09
MKS1-206ENST00000577824 COA1Q9GZY4 146 aa15.64■□□□□ 0.09
MKS1-206ENST00000577824 IL1R1P14778 569 aa15.63■□□□□ 0.09
MKS1-206ENST00000577824 CENPQQ7L2Z9 268 aaPredicted RBP15.63■□□□□ 0.09
MKS1-206ENST00000577824 ZNF804AQ7Z570 1209 aa15.63■□□□□ 0.09
MKS1-206ENST00000577824 LARGE2Q8N3Y3 721 aa15.63■□□□□ 0.09
MKS1-206ENST00000577824 IL1RAPL2Q9NP60 686 aa15.63■□□□□ 0.09
MKS1-206ENST00000577824 DBNLQ9UJU6 430 aaKnown RBP15.63■□□□□ 0.09
MKS1-206ENST00000577824 SALL3Q9BXA9 1300 aa15.63■□□□□ 0.09
MKS1-206ENST00000577824 SCN9AQ15858 1988 aa15.62■□□□□ 0.09
MKS1-206ENST00000577824 FZD9O00144 591 aa15.62■□□□□ 0.09
MKS1-206ENST00000577824 TIMM10P62072 90 aa15.62■□□□□ 0.09
MKS1-206ENST00000577824 NUCB1Q02818 461 aa15.62■□□□□ 0.09
MKS1-206ENST00000577824 CAVIN4Q5BKX8 364 aa15.62■□□□□ 0.09
MKS1-206ENST00000577824 PODNQ7Z5L7 613 aa15.62■□□□□ 0.09
MKS1-206ENST00000577824 XAGE2Q96GT9 111 aa15.62■□□□□ 0.09
MKS1-206ENST00000577824 ZNF512BQ96KM6 892 aaPredicted RBP15.62■□□□□ 0.09
MKS1-206ENST00000577824 PPP4R2Q9NY27 417 aa15.62■□□□□ 0.09
MKS1-206ENST00000577824 TLR7Q9NYK1 1049 aaKnown RBP15.62■□□□□ 0.09
MKS1-206ENST00000577824 COL1A1P02452 1464 aaPredicted RBP15.62■□□□□ 0.09
MKS1-206ENST00000577824 CHD4Q14839 1912 aa15.62■□□□□ 0.09
MKS1-206ENST00000577824 PDS5AQ29RF7 1337 aaKnown RBP15.62■□□□□ 0.09
MKS1-206ENST00000577824 ECE2O60344 883 aa15.61■□□□□ 0.09
MKS1-206ENST00000577824 ARID4AP29374 1257 aaPredicted RBP15.61■□□□□ 0.09
MKS1-206ENST00000577824 ADORA1P30542 326 aa15.61■□□□□ 0.09
MKS1-206ENST00000577824 HIBADHP31937 336 aaKnown RBP15.61■□□□□ 0.09
MKS1-206ENST00000577824 GYG1P46976 350 aa15.61■□□□□ 0.09
MKS1-206ENST00000577824 C9orf131Q5VYM1 1079 aa15.61■□□□□ 0.09
MKS1-206ENST00000577824 AACSQ86V21 672 aa15.61■□□□□ 0.09
MKS1-206ENST00000577824 NIM1KQ8IY84 436 aa15.61■□□□□ 0.09
MKS1-206ENST00000577824 TDRD7Q8NHU6 1098 aaKnown RBP15.61■□□□□ 0.09
MKS1-206ENST00000577824 DBNDD2Q9BQY9 259 aa15.61■□□□□ 0.09
MKS1-206ENST00000577824 CD209Q9NNX6 404 aa15.61■□□□□ 0.09
MKS1-206ENST00000577824 RNF181Q9P0P0 153 aa15.61■□□□□ 0.09
MKS1-206ENST00000577824 MYH13Q9UKX3 1938 aa15.6■□□□□ 0.09
MKS1-206ENST00000577824 YDJCA8MPS7 323 aa15.6■□□□□ 0.09
MKS1-206ENST00000577824 APBB1O00213 710 aa15.6■□□□□ 0.09
MKS1-206ENST00000577824 RIMBP2O15034 1052 aa15.6■□□□□ 0.09
MKS1-206ENST00000577824 SEMA3EO15041 775 aa15.6■□□□□ 0.09
MKS1-206ENST00000577824 CCDC102BQ68D86 513 aa15.6■□□□□ 0.09
MKS1-206ENST00000577824 JDP2Q8WYK2 163 aa15.6■□□□□ 0.09
MKS1-206ENST00000577824 DBNDD1Q9H9R9 158 aa15.6■□□□□ 0.09
MKS1-206ENST00000577824 ZNRF3Q9ULT6 936 aa15.6■□□□□ 0.09
MKS1-206ENST00000577824 SMARCA5O60264 1052 aaPredicted RBP15.59■□□□□ 0.09
MKS1-206ENST00000577824 PHKA1P46020 1223 aa15.59■□□□□ 0.09
MKS1-206ENST00000577824 BCAMP50895 628 aa15.59■□□□□ 0.09
MKS1-206ENST00000577824 ANKRD45Q5TZF3 282 aa15.59■□□□□ 0.09
MKS1-206ENST00000577824 CHD1LQ86WJ1 897 aa15.59■□□□□ 0.09
MKS1-206ENST00000577824 CCDC136Q96JN2 1154 aa15.59■□□□□ 0.09
MKS1-206ENST00000577824 CCDC8Q9H0W5 538 aaPredicted RBP15.59■□□□□ 0.09
MKS1-206ENST00000577824 FAM205AQ6ZU69 1335 aa15.59■□□□□ 0.09
MKS1-206ENST00000577824 DOK7Q18PE1 504 aa15.58■□□□□ 0.08
MKS1-206ENST00000577824 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.58■□□□□ 0.08
MKS1-206ENST00000577824 NEUROD6Q96NK8 337 aa15.58■□□□□ 0.08
MKS1-206ENST00000577824 AKAP11Q9UKA4 1901 aa15.58■□□□□ 0.08
MKS1-206ENST00000577824 IFIT2P09913 472 aaKnown RBP15.57■□□□□ 0.08
MKS1-206ENST00000577824 UQCRFS1P1P0C7P4 283 aa15.57■□□□□ 0.08
MKS1-206ENST00000577824 FKBP1AP62942 108 aaKnown RBP15.57■□□□□ 0.08
MKS1-206ENST00000577824 VPS37DQ86XT2 251 aa15.57■□□□□ 0.08
MKS1-206ENST00000577824 ZNF541Q9H0D2 1346 aa15.57■□□□□ 0.08
MKS1-206ENST00000577824 SALL1Q9NSC2 1324 aa15.57■□□□□ 0.08
MKS1-206ENST00000577824 RASGRF1Q13972 1273 aa15.56■□□□□ 0.08
MKS1-206ENST00000577824 CCDC158Q5M9N0 1113 aa15.56■□□□□ 0.08
MKS1-206ENST00000577824 STRIP1Q5VSL9 837 aa15.56■□□□□ 0.08
MKS1-206ENST00000577824 GNL3LQ9NVN8 582 aaKnown RBP15.56■□□□□ 0.08
MKS1-206ENST00000577824 STAP2Q9UGK3 403 aa15.56■□□□□ 0.08
MKS1-206ENST00000577824 TTC41PQ6P2S7 1318 aa15.56■□□□□ 0.08
MKS1-206ENST00000577824 WDR90Q96KV7 1748 aa15.56■□□□□ 0.08
MKS1-206ENST00000577824 DOCK2Q92608 1830 aa15.55■□□□□ 0.08
MKS1-206ENST00000577824 MAST2Q6P0Q8 1798 aa15.55■□□□□ 0.08
MKS1-206ENST00000577824 AOX1Q06278 1338 aa15.55■□□□□ 0.08
MKS1-206ENST00000577824 USP17L3A6NCW0 530 aa15.55■□□□□ 0.08
MKS1-206ENST00000577824 USP17L4A6NCW7 530 aa15.55■□□□□ 0.08
MKS1-206ENST00000577824 MCAMP43121 646 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms