RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 VIL1P09327 827 aaKnown RBP24.14■■□□□ 1.45
SS18-208ENST00000577751 UBE4AQ14139 1066 aa24.14■■□□□ 1.45
SS18-208ENST00000577751 VGLL2Q8N8G2 317 aa24.14■■□□□ 1.45
SS18-208ENST00000577751 DPF2Q92785 391 aa24.14■■□□□ 1.45
SS18-208ENST00000577751 FBXO3Q9UK99 471 aa24.14■■□□□ 1.45
SS18-208ENST00000577751 ZNF646O15015 1829 aaPredicted RBP24.14■■□□□ 1.45
SS18-208ENST00000577751 POTEIP0CG38 1075 aa24.13■■□□□ 1.45
SS18-208ENST00000577751 POTEJP0CG39 1038 aa24.13■■□□□ 1.45
SS18-208ENST00000577751 MS4A1P11836 297 aa24.13■■□□□ 1.45
SS18-208ENST00000577751 PNMA8AQ86V59 439 aaPredicted RBP24.13■■□□□ 1.45
SS18-208ENST00000577751 PANK1Q8TE04 598 aa24.13■■□□□ 1.45
SS18-208ENST00000577751 YTHDC1Q96MU7 727 aaKnown RBP24.13■■□□□ 1.45
SS18-208ENST00000577751 ZBTB12Q9Y330 459 aaPredicted RBP24.13■■□□□ 1.45
SS18-208ENST00000577751 ZNF609O15014 1411 aa24.12■■□□□ 1.45
SS18-208ENST00000577751 ITPRIPQ8IWB1 547 aa24.12■■□□□ 1.45
SS18-208ENST00000577751 COPRSQ9NQ92 184 aa24.12■■□□□ 1.45
SS18-208ENST00000577751 PDE8BO95263 885 aa24.11■■□□□ 1.45
SS18-208ENST00000577751 RPS12P25398 132 aaKnown RBP24.11■■□□□ 1.45
SS18-208ENST00000577751 METTL24Q5JXM2 366 aa24.11■■□□□ 1.45
SS18-208ENST00000577751 ATG9AQ7Z3C6 839 aa24.11■■□□□ 1.45
SS18-208ENST00000577751 LDHDQ86WU2 507 aa24.11■■□□□ 1.45
SS18-208ENST00000577751 CD209Q9NNX6 404 aa24.11■■□□□ 1.45
SS18-208ENST00000577751 USP17L3A6NCW0 530 aa24.1■■□□□ 1.45
SS18-208ENST00000577751 USP17L4A6NCW7 530 aa24.1■■□□□ 1.45
SS18-208ENST00000577751 CIAO1O76071 339 aa24.1■■□□□ 1.45
SS18-208ENST00000577751 USP17L1Q7RTZ2 530 aa24.1■■□□□ 1.45
SS18-208ENST00000577751 ADARB2Q9NS39 739 aaKnown RBP24.1■■□□□ 1.45
SS18-208ENST00000577751 CNOT7Q9UIV1 285 aaKnown RBP24.1■■□□□ 1.45
SS18-208ENST00000577751 SRGAP3O43295 1099 aa24.09■■□□□ 1.45
SS18-208ENST00000577751 EAPPQ56P03 285 aaPredicted RBP24.09■■□□□ 1.45
SS18-208ENST00000577751 CHADLQ6NUI6 762 aa24.09■■□□□ 1.45
SS18-208ENST00000577751 RSBN1LQ6PCB5 846 aaPredicted RBP24.09■■□□□ 1.45
SS18-208ENST00000577751 USP50Q70EL3 339 aaPredicted RBP24.09■■□□□ 1.45
SS18-208ENST00000577751 HSPA6P17066 643 aa24.08■■□□□ 1.45
SS18-208ENST00000577751 STRIP1Q5VSL9 837 aa24.08■■□□□ 1.45
SS18-208ENST00000577751 AGBL3Q8NEM8 1001 aa24.08■■□□□ 1.45
SS18-208ENST00000577751 GMLQ99445 158 aa24.08■■□□□ 1.45
SS18-208ENST00000577751 PA2G4Q9UQ80 394 aaKnown RBP24.08■■□□□ 1.45
SS18-208ENST00000577751 SHTN1A0MZ66 631 aa24.07■■□□□ 1.44
SS18-208ENST00000577751 IL1R1P14778 569 aa24.07■■□□□ 1.44
SS18-208ENST00000577751 FGFR2P21802 821 aa24.07■■□□□ 1.44
SS18-208ENST00000577751 DACT2Q5SW24 774 aa24.07■■□□□ 1.44
SS18-208ENST00000577751 ZNF804AQ7Z570 1209 aa24.07■■□□□ 1.44
SS18-208ENST00000577751 SIL1Q9H173 461 aa24.07■■□□□ 1.44
SS18-208ENST00000577751 PNMA6EA0A0J9YXQ4 647 aa24.06■■□□□ 1.44
SS18-208ENST00000577751 H7C1D1 291 aa24.06■■□□□ 1.44
SS18-208ENST00000577751 MVPQ14764 893 aaKnown RBP24.06■■□□□ 1.44
SS18-208ENST00000577751 MICALL2Q8IY33 904 aa24.06■■□□□ 1.44
SS18-208ENST00000577751 FAM84BQ96KN1 310 aaPredicted RBP24.06■■□□□ 1.44
SS18-208ENST00000577751 IL15P40933 162 aaPredicted RBP24.05■■□□□ 1.44
SS18-208ENST00000577751 TTLL5Q6EMB2 1281 aa24.05■■□□□ 1.44
SS18-208ENST00000577751 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.05■■□□□ 1.44
SS18-208ENST00000577751 HIBADHP31937 336 aaKnown RBP24.04■■□□□ 1.44
SS18-208ENST00000577751 ATP8B2P98198 1209 aa24.04■■□□□ 1.44
SS18-208ENST00000577751 PDE3AQ14432 1141 aa24.04■■□□□ 1.44
SS18-208ENST00000577751 PUM3Q15397 648 aaKnown RBP24.04■■□□□ 1.44
SS18-208ENST00000577751 CLEC11AQ9Y240 323 aa24.04■■□□□ 1.44
SS18-208ENST00000577751 GYG1P46976 350 aa24.03■■□□□ 1.44
SS18-208ENST00000577751 HIRAP54198 1017 aaPredicted RBP24.03■■□□□ 1.44
SS18-208ENST00000577751 GTF2IP78347 998 aa24.03■■□□□ 1.44
SS18-208ENST00000577751 POLA2Q14181 598 aa24.03■■□□□ 1.44
SS18-208ENST00000577751 FBXO33Q7Z6M2 555 aa24.03■■□□□ 1.44
SS18-208ENST00000577751 TDRD7Q8NHU6 1098 aaKnown RBP24.03■■□□□ 1.44
SS18-208ENST00000577751 TRPM4Q8TD43 1214 aa24.03■■□□□ 1.44
SS18-208ENST00000577751 C1orf115Q9H7X2 142 aa24.03■■□□□ 1.44
SS18-208ENST00000577751 CEP126Q9P2H0 1117 aa24.03■■□□□ 1.44
SS18-208ENST00000577751 PGAP2Q9UHJ9 254 aa24.03■■□□□ 1.44
SS18-208ENST00000577751 DDX19BQ9UMR2 479 aa24.03■■□□□ 1.44
SS18-208ENST00000577751 COG6Q9Y2V7 657 aa24.03■■□□□ 1.44
SS18-208ENST00000577751 MYO3BQ8WXR4 1341 aa24.03■■□□□ 1.44
SS18-208ENST00000577751 SASH1O94885 1247 aa24.02■■□□□ 1.44
SS18-208ENST00000577751 ITGBL1O95965 494 aaPredicted RBP24.02■■□□□ 1.44
SS18-208ENST00000577751 ZNF280AP59817 542 aaPredicted RBP24.02■■□□□ 1.44
SS18-208ENST00000577751 SAMD7Q7Z3H4 446 aa24.02■■□□□ 1.44
SS18-208ENST00000577751 SSH3Q8TE77 659 aa24.02■■□□□ 1.44
SS18-208ENST00000577751 LPIN2Q92539 896 aa24.02■■□□□ 1.44
SS18-208ENST00000577751 MXD3Q9BW11 206 aa24.02■■□□□ 1.44
SS18-208ENST00000577751 C20orf194Q5TEA3 1177 aa24.01■■□□□ 1.43
SS18-208ENST00000577751 ZC3H15Q8WU90 426 aaKnown RBP24.01■■□□□ 1.43
SS18-208ENST00000577751 EGFRP00533 1210 aa24■■□□□ 1.43
SS18-208ENST00000577751 IFIT1P09914 478 aaKnown RBP24■■□□□ 1.43
SS18-208ENST00000577751 USP17L8P0C7I0 530 aa24■■□□□ 1.43
SS18-208ENST00000577751 MAP1SQ66K74 1059 aaPredicted RBP24■■□□□ 1.43
SS18-208ENST00000577751 CNTROBQ8N137 903 aa24■■□□□ 1.43
SS18-208ENST00000577751 FBXW7Q969H0 707 aa24■■□□□ 1.43
SS18-208ENST00000577751 PASKQ96RG2 1323 aa24■■□□□ 1.43
SS18-208ENST00000577751 CAVIN4Q5BKX8 364 aa23.99■■□□□ 1.43
SS18-208ENST00000577751 ZBTB40Q9NUA8 1239 aa23.99■■□□□ 1.43
SS18-208ENST00000577751 FAM205AQ6ZU69 1335 aa23.99■■□□□ 1.43
SS18-208ENST00000577751 SLC5A1P13866 664 aa23.98■■□□□ 1.43
SS18-208ENST00000577751 MMP14P50281 582 aa23.98■■□□□ 1.43
SS18-208ENST00000577751 APLP1P51693 650 aa23.98■■□□□ 1.43
SS18-208ENST00000577751 FKBP1AP62942 108 aaKnown RBP23.98■■□□□ 1.43
SS18-208ENST00000577751 TBC1D10BQ4KMP7 808 aaPredicted RBP23.98■■□□□ 1.43
SS18-208ENST00000577751 CEP85Q6P2H3 762 aa23.98■■□□□ 1.43
SS18-208ENST00000577751 BCAMP50895 628 aa23.97■■□□□ 1.43
SS18-208ENST00000577751 ATP2B3Q16720 1220 aa23.97■■□□□ 1.43
SS18-208ENST00000577751 CERS5Q8N5B7 392 aa23.97■■□□□ 1.43
SS18-208ENST00000577751 CHMP4BQ9H444 224 aaKnown RBP23.97■■□□□ 1.43
SS18-208ENST00000577751 KIF4BQ2VIQ3 1234 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms