RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 MOB2Q70IA6 237 aa17.23■□□□□ 0.35
COPS3-214ENST00000577246 GCC1Q96CN9 775 aa17.23■□□□□ 0.35
COPS3-214ENST00000577246 METTL22Q9BUU2 404 aaPredicted RBP17.23■□□□□ 0.35
COPS3-214ENST00000577246 CFHR5Q9BXR6 569 aa17.23■□□□□ 0.35
COPS3-214ENST00000577246 PHAXQ9H814 394 aaKnown RBP17.23■□□□□ 0.35
COPS3-214ENST00000577246 BSDC1Q9NW68 430 aaPredicted RBP17.23■□□□□ 0.35
COPS3-214ENST00000577246 IFT57Q9NWB7 429 aa17.23■□□□□ 0.35
COPS3-214ENST00000577246 FKTNO75072 461 aa17.22■□□□□ 0.35
COPS3-214ENST00000577246 GNAI1P63096 354 aa17.22■□□□□ 0.35
COPS3-214ENST00000577246 NBPF9Q3BBW0 867 aa17.22■□□□□ 0.35
COPS3-214ENST00000577246 APOBEC3FQ8IUX4 373 aaKnown RBP17.22■□□□□ 0.35
COPS3-214ENST00000577246 FBXW7Q969H0 707 aa17.22■□□□□ 0.35
COPS3-214ENST00000577246 COA1Q9GZY4 146 aa17.22■□□□□ 0.35
COPS3-214ENST00000577246 WNT10BO00744 389 aa17.21■□□□□ 0.35
COPS3-214ENST00000577246 DACT2Q5SW24 774 aa17.21■□□□□ 0.35
COPS3-214ENST00000577246 CCDC30Q5VVM6 783 aa17.21■□□□□ 0.35
COPS3-214ENST00000577246 ZNF853P0CG23 659 aa17.2■□□□□ 0.34
COPS3-214ENST00000577246 CCT4P50991 539 aaKnown RBP17.2■□□□□ 0.34
COPS3-214ENST00000577246 NEXNQ0ZGT2 675 aa17.2■□□□□ 0.34
COPS3-214ENST00000577246 PRAMEF18Q5VWM3 479 aa17.2■□□□□ 0.34
COPS3-214ENST00000577246 MINPP1Q9UNW1 487 aa17.2■□□□□ 0.34
COPS3-214ENST00000577246 LEMD3Q9Y2U8 911 aa17.2■□□□□ 0.34
COPS3-214ENST00000577246 PSME4Q14997 1843 aa17.19■□□□□ 0.34
COPS3-214ENST00000577246 INHBEP58166 350 aa17.19■□□□□ 0.34
COPS3-214ENST00000577246 MKRN3Q13064 507 aaKnown RBP17.19■□□□□ 0.34
COPS3-214ENST00000577246 ADAMTS8Q9UP79 889 aa17.19■□□□□ 0.34
COPS3-214ENST00000577246 SCAF8Q9UPN6 1271 aaKnown RBP17.19■□□□□ 0.34
COPS3-214ENST00000577246 ELL2O00472 640 aaPredicted RBP17.18■□□□□ 0.34
COPS3-214ENST00000577246 IGHMBP2P38935 993 aaKnown RBP17.18■□□□□ 0.34
COPS3-214ENST00000577246 TTLL11Q8NHH1 800 aa17.18■□□□□ 0.34
COPS3-214ENST00000577246 JARID2Q92833 1246 aaPredicted RBP17.18■□□□□ 0.34
COPS3-214ENST00000577246 MAP3K2Q9Y2U5 619 aa17.18■□□□□ 0.34
COPS3-214ENST00000577246 COL1A1P02452 1464 aaPredicted RBP17.18■□□□□ 0.34
COPS3-214ENST00000577246 MANSC4A6NHS7 340 aaPredicted RBP17.17■□□□□ 0.34
COPS3-214ENST00000577246 SASH1O94885 1247 aa17.17■□□□□ 0.34
COPS3-214ENST00000577246 PTPN12Q05209 780 aaKnown RBP17.17■□□□□ 0.34
COPS3-214ENST00000577246 INTS3Q68E01 1043 aaKnown RBP17.17■□□□□ 0.34
COPS3-214ENST00000577246 TTLL5Q6EMB2 1281 aa17.17■□□□□ 0.34
COPS3-214ENST00000577246 ANKRD2Q9GZV1 360 aa17.17■□□□□ 0.34
COPS3-214ENST00000577246 LDLRAD1Q5T700 205 aa17.16■□□□□ 0.34
COPS3-214ENST00000577246 SPRYD7Q5W111 196 aa17.16■□□□□ 0.34
COPS3-214ENST00000577246 KSR2Q6VAB6 950 aa17.16■□□□□ 0.34
COPS3-214ENST00000577246 MXD3Q9BW11 206 aa17.16■□□□□ 0.34
COPS3-214ENST00000577246 GREM2Q9H772 168 aa17.16■□□□□ 0.34
COPS3-214ENST00000577246 ANGEL1Q9UNK9 670 aaKnown RBP17.16■□□□□ 0.34
COPS3-214ENST00000577246 UNCXA6NJT0 531 aa17.15■□□□□ 0.34
COPS3-214ENST00000577246 PPP1R12BO60237 982 aaPredicted RBP17.15■□□□□ 0.34
COPS3-214ENST00000577246 ZBTB48P10074 688 aaPredicted RBP17.15■□□□□ 0.34
COPS3-214ENST00000577246 PRKG1Q13976 671 aa17.15■□□□□ 0.34
COPS3-214ENST00000577246 SLC10A4Q96EP9 437 aa17.15■□□□□ 0.34
COPS3-214ENST00000577246 STK31Q9BXU1 1019 aa17.15■□□□□ 0.34
COPS3-214ENST00000577246 PPP2R3BQ9Y5P8 575 aa17.15■□□□□ 0.34
COPS3-214ENST00000577246 ZNF804BA4D1E1 1349 aa17.15■□□□□ 0.34
COPS3-214ENST00000577246 PI4KAP2A4QPH2 592 aa17.14■□□□□ 0.33
COPS3-214ENST00000577246 KCNJ4P48050 445 aa17.14■□□□□ 0.33
COPS3-214ENST00000577246 KIAA0825Q8IV33 1275 aa17.14■□□□□ 0.33
COPS3-214ENST00000577246 PI4KAP1Q8N8J0 262 aa17.14■□□□□ 0.33
COPS3-214ENST00000577246 MPHOSPH8Q99549 860 aa17.14■□□□□ 0.33
COPS3-214ENST00000577246 MYO1BO43795 1136 aa17.13■□□□□ 0.33
COPS3-214ENST00000577246 IGKV5-2P06315 115 aa17.13■□□□□ 0.33
COPS3-214ENST00000577246 DLGAP5Q15398 846 aa17.13■□□□□ 0.33
COPS3-214ENST00000577246 OTUD7BQ6GQQ9 843 aa17.13■□□□□ 0.33
COPS3-214ENST00000577246 IFNL1Q8IU54 200 aa17.13■□□□□ 0.33
COPS3-214ENST00000577246 C8orf58Q8NAV2 365 aa17.13■□□□□ 0.33
COPS3-214ENST00000577246 DEFB129Q9H1M3 183 aa17.13■□□□□ 0.33
COPS3-214ENST00000577246 TRIM17Q9Y577 477 aa17.13■□□□□ 0.33
COPS3-214ENST00000577246 WTIPA6NIX2 430 aaPredicted RBP17.12■□□□□ 0.33
COPS3-214ENST00000577246 GTF2IP78347 998 aa17.12■□□□□ 0.33
COPS3-214ENST00000577246 MAP3K11Q16584 847 aa17.12■□□□□ 0.33
COPS3-214ENST00000577246 ERO1AQ96HE7 468 aa17.12■□□□□ 0.33
COPS3-214ENST00000577246 ZBED3Q96IU2 234 aaPredicted RBP17.12■□□□□ 0.33
COPS3-214ENST00000577246 NEURL1BA8MQ27 555 aa17.11■□□□□ 0.33
COPS3-214ENST00000577246 APAF1O14727 1248 aa17.11■□□□□ 0.33
COPS3-214ENST00000577246 ITGA6P23229 1130 aa17.11■□□□□ 0.33
COPS3-214ENST00000577246 SUPT20HL1Q3ZLR7 823 aa17.11■□□□□ 0.33
COPS3-214ENST00000577246 UBE3BQ7Z3V4 1068 aa17.11■□□□□ 0.33
COPS3-214ENST00000577246 TXNRD3Q86VQ6 643 aa17.11■□□□□ 0.33
COPS3-214ENST00000577246 MTMR14Q8NCE2 650 aa17.11■□□□□ 0.33
COPS3-214ENST00000577246 CWF19L2Q2TBE0 894 aaKnown RBP17.1■□□□□ 0.33
COPS3-214ENST00000577246 OTOP1Q7RTM1 612 aa17.1■□□□□ 0.33
COPS3-214ENST00000577246 PLA2G12BQ9BX93 195 aa17.1■□□□□ 0.33
COPS3-214ENST00000577246 R3HDMLQ9H3Y0 253 aa17.1■□□□□ 0.33
COPS3-214ENST00000577246 H7C1W4 665 aa17.09■□□□□ 0.33
COPS3-214ENST00000577246 IREB2P48200 963 aaKnown RBP17.09■□□□□ 0.33
COPS3-214ENST00000577246 DDX10Q13206 875 aaKnown RBP17.09■□□□□ 0.33
COPS3-214ENST00000577246 WNK4Q96J92 1243 aa17.09■□□□□ 0.33
COPS3-214ENST00000577246 MYH16Q9H6N6 1097 aa17.09■□□□□ 0.33
COPS3-214ENST00000577246 CD209Q9NNX6 404 aa17.09■□□□□ 0.33
COPS3-214ENST00000577246 KLRK1P26718 216 aa17.07■□□□□ 0.32
COPS3-214ENST00000577246 FKBP1AP62942 108 aaKnown RBP17.07■□□□□ 0.32
COPS3-214ENST00000577246 CHRNDQ07001 517 aa17.07■□□□□ 0.32
COPS3-214ENST00000577246 GCKRQ14397 625 aa17.07■□□□□ 0.32
COPS3-214ENST00000577246 ARHGEF6Q15052 776 aa17.07■□□□□ 0.32
COPS3-214ENST00000577246 HABP4Q5JVS0 413 aaKnown RBP17.07■□□□□ 0.32
COPS3-214ENST00000577246 ZNF804AQ7Z570 1209 aa17.07■□□□□ 0.32
COPS3-214ENST00000577246 ANKRD18BA2A2Z9 1011 aa17.06■□□□□ 0.32
COPS3-214ENST00000577246 IGF2BP3O00425 579 aaKnown RBP eCLIP17.06■□□□□ 0.32
COPS3-214ENST00000577246 C15orf52Q6ZUT6 534 aaKnown RBP17.06■□□□□ 0.32
COPS3-214ENST00000577246 ANKRD13AQ8IZ07 590 aa17.06■□□□□ 0.32
COPS3-214ENST00000577246 TSPYL6Q8N831 410 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms