RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 NEURL1BA8MQ27 555 aa15.15■□□□□ 0.02
CDH8-202ENST00000577228 CCT4P50991 539 aaKnown RBP15.15■□□□□ 0.02
CDH8-202ENST00000577228 CWF19L2Q2TBE0 894 aaKnown RBP15.15■□□□□ 0.02
CDH8-202ENST00000577228 UBE3BQ7Z3V4 1068 aa15.15■□□□□ 0.02
CDH8-202ENST00000577228 REM2Q8IYK8 340 aaPredicted RBP15.15■□□□□ 0.02
CDH8-202ENST00000577228 FBXW7Q969H0 707 aa15.15■□□□□ 0.02
CDH8-202ENST00000577228 MYH3P11055 1940 aa15.14■□□□□ 0.01
CDH8-202ENST00000577228 IGHMBP2P38935 993 aaKnown RBP15.14■□□□□ 0.01
CDH8-202ENST00000577228 DACT2Q5SW24 774 aa15.14■□□□□ 0.01
CDH8-202ENST00000577228 OGFOD1Q8N543 542 aa15.14■□□□□ 0.01
CDH8-202ENST00000577228 MXD3Q9BW11 206 aa15.14■□□□□ 0.01
CDH8-202ENST00000577228 COA1Q9GZY4 146 aa15.14■□□□□ 0.01
CDH8-202ENST00000577228 SCAF8Q9UPN6 1271 aaKnown RBP15.14■□□□□ 0.01
CDH8-202ENST00000577228 SPEF2Q9C093 1822 aa15.14■□□□□ 0.01
CDH8-202ENST00000577228 MYO3BQ8WXR4 1341 aa15.14■□□□□ 0.01
CDH8-202ENST00000577228 AKAP11Q9UKA4 1901 aa15.13■□□□□ 0.01
CDH8-202ENST00000577228 H7C1W4 665 aa15.13■□□□□ 0.01
CDH8-202ENST00000577228 TWISTNBQ3B726 338 aaPredicted RBP15.13■□□□□ 0.01
CDH8-202ENST00000577228 NBPF9Q3BBW0 867 aa15.13■□□□□ 0.01
CDH8-202ENST00000577228 STRIP1Q5VSL9 837 aa15.13■□□□□ 0.01
CDH8-202ENST00000577228 MOB2Q70IA6 237 aa15.13■□□□□ 0.01
CDH8-202ENST00000577228 G2E3Q7L622 706 aa15.13■□□□□ 0.01
CDH8-202ENST00000577228 UBE2Q2LH0YL09 131 aa15.12■□□□□ 0.01
CDH8-202ENST00000577228 SLC4A2P04920 1241 aa15.12■□□□□ 0.01
CDH8-202ENST00000577228 TTLL12Q14166 644 aaPredicted RBP15.12■□□□□ 0.01
CDH8-202ENST00000577228 CCDC27Q2M243 656 aa15.12■□□□□ 0.01
CDH8-202ENST00000577228 PRAMEF18Q5VWM3 479 aa15.12■□□□□ 0.01
CDH8-202ENST00000577228 LEMD3Q9Y2U8 911 aa15.12■□□□□ 0.01
CDH8-202ENST00000577228 WNT10BO00744 389 aa15.11■□□□□ 0.01
CDH8-202ENST00000577228 SLC34A2O95436 690 aa15.11■□□□□ 0.01
CDH8-202ENST00000577228 ITGA6P23229 1130 aa15.11■□□□□ 0.01
CDH8-202ENST00000577228 NF2P35240 595 aa15.11■□□□□ 0.01
CDH8-202ENST00000577228 GCKRQ14397 625 aa15.11■□□□□ 0.01
CDH8-202ENST00000577228 CTU1Q7Z7A3 348 aaKnown RBP15.11■□□□□ 0.01
CDH8-202ENST00000577228 TXNRD3Q86VQ6 643 aa15.11■□□□□ 0.01
CDH8-202ENST00000577228 WWC1Q8IX03 1113 aa15.11■□□□□ 0.01
CDH8-202ENST00000577228 PLA2G12BQ9BX93 195 aa15.11■□□□□ 0.01
CDH8-202ENST00000577228 ANKRD2Q9GZV1 360 aa15.11■□□□□ 0.01
CDH8-202ENST00000577228 ZNF804BA4D1E1 1349 aa15.11■□□□□ 0.01
CDH8-202ENST00000577228 SASH1O94885 1247 aa15.1■□□□□ 0.01
CDH8-202ENST00000577228 MMP14P50281 582 aa15.1■□□□□ 0.01
CDH8-202ENST00000577228 FLIIQ13045 1269 aa15.1■□□□□ 0.01
CDH8-202ENST00000577228 MPHOSPH8Q99549 860 aa15.1■□□□□ 0.01
CDH8-202ENST00000577228 MYH16Q9H6N6 1097 aa15.1■□□□□ 0.01
CDH8-202ENST00000577228 ZNF646O15015 1829 aaPredicted RBP15.1■□□□□ 0.01
CDH8-202ENST00000577228 KLRK1P26718 216 aa15.09■□□□□ 0.01
CDH8-202ENST00000577228 KCNJ4P48050 445 aa15.09■□□□□ 0.01
CDH8-202ENST00000577228 SOX10P56693 466 aa15.09■□□□□ 0.01
CDH8-202ENST00000577228 FKBP5Q13451 457 aaPredicted RBP15.09■□□□□ 0.01
CDH8-202ENST00000577228 CCDC184Q52MB2 194 aa15.09■□□□□ 0.01
CDH8-202ENST00000577228 TTLL5Q6EMB2 1281 aa15.09■□□□□ 0.01
CDH8-202ENST00000577228 HDAC9Q9UKV0 1011 aa15.09■□□□□ 0.01
CDH8-202ENST00000577228 IL16Q14005 1332 aa15.09■□□□□ 0.01
CDH8-202ENST00000577228 CASP7P55210 303 aa15.08■□□□□ 0
CDH8-202ENST00000577228 APOBEC3FQ8IUX4 373 aaKnown RBP15.08■□□□□ 0
CDH8-202ENST00000577228 KIAA0825Q8IV33 1275 aa15.08■□□□□ 0
CDH8-202ENST00000577228 DNAAF4Q8WXU2 420 aa15.08■□□□□ 0
CDH8-202ENST00000577228 CSF1RP07333 972 aa15.07■□□□□ 0
CDH8-202ENST00000577228 GTF2IP78347 998 aa15.07■□□□□ 0
CDH8-202ENST00000577228 CHRNDQ07001 517 aa15.07■□□□□ 0
CDH8-202ENST00000577228 ARMC9Q7Z3E5 817 aa15.07■□□□□ 0
CDH8-202ENST00000577228 LINS1Q8NG48 757 aa15.07■□□□□ 0
CDH8-202ENST00000577228 ANKRD18BA2A2Z9 1011 aa15.06■□□□□ 0
CDH8-202ENST00000577228 TBC1D8O95759 1140 aa15.06■□□□□ 0
CDH8-202ENST00000577228 MKRN3Q13064 507 aaKnown RBP15.06■□□□□ 0
CDH8-202ENST00000577228 PRKG1Q13976 671 aa15.06■□□□□ 0
CDH8-202ENST00000577228 FANCIQ9NVI1 1328 aa15.06■□□□□ 0
CDH8-202ENST00000577228 TM4SF4P48230 202 aa15.05■□□□□ -0
CDH8-202ENST00000577228 PTPN12Q05209 780 aaKnown RBP15.05■□□□□ -0
CDH8-202ENST00000577228 SREBF2Q12772 1141 aa15.05■□□□□ -0
CDH8-202ENST00000577228 ZNF296Q8WUU4 475 aaPredicted RBP15.05■□□□□ -0
CDH8-202ENST00000577228 ZBED3Q96IU2 234 aaPredicted RBP15.05■□□□□ -0
CDH8-202ENST00000577228 CD209Q9NNX6 404 aa15.05■□□□□ -0
CDH8-202ENST00000577228 COL1A1P02452 1464 aaPredicted RBP15.04■□□□□ -0
CDH8-202ENST00000577228 DLGAP5Q15398 846 aa15.04■□□□□ -0
CDH8-202ENST00000577228 PKN2Q16513 984 aaKnown RBP15.04■□□□□ -0
CDH8-202ENST00000577228 NCBP3Q53F19 620 aaKnown RBP15.04■□□□□ -0
CDH8-202ENST00000577228 HPS5Q9UPZ3 1129 aa15.04■□□□□ -0
CDH8-202ENST00000577228 CHMP3Q9Y3E7 222 aa15.04■□□□□ -0
CDH8-202ENST00000577228 PDE4DIPQ5VU43 2346 aa15.03■□□□□ -0
CDH8-202ENST00000577228 GPR25O00155 361 aa15.03■□□□□ -0
CDH8-202ENST00000577228 SNAP23O00161 211 aa15.03■□□□□ -0
CDH8-202ENST00000577228 TAF5LO75529 589 aa15.03■□□□□ -0
CDH8-202ENST00000577228 IFIT5Q13325 482 aaKnown RBP15.03■□□□□ -0
CDH8-202ENST00000577228 NOM1Q5C9Z4 860 aaKnown RBP15.03■□□□□ -0
CDH8-202ENST00000577228 C15orf52Q6ZUT6 534 aaKnown RBP15.03■□□□□ -0
CDH8-202ENST00000577228 CERS5Q8N5B7 392 aa15.03■□□□□ -0
CDH8-202ENST00000577228 HELBQ8NG08 1087 aaPredicted RBP15.03■□□□□ -0
CDH8-202ENST00000577228 ANGEL1Q9UNK9 670 aaKnown RBP15.03■□□□□ -0
CDH8-202ENST00000577228 IRS2Q9Y4H2 1338 aa15.02■□□□□ -0
CDH8-202ENST00000577228 VAMP4O75379 141 aa15.02■□□□□ -0
CDH8-202ENST00000577228 FOXO4P98177 505 aa15.02■□□□□ -0
CDH8-202ENST00000577228 LDLRAD1Q5T700 205 aa15.02■□□□□ -0
CDH8-202ENST00000577228 SPRYD7Q5W111 196 aa15.02■□□□□ -0
CDH8-202ENST00000577228 ZNF804AQ7Z570 1209 aa15.02■□□□□ -0
CDH8-202ENST00000577228 DEFB129Q9H1M3 183 aa15.02■□□□□ -0
CDH8-202ENST00000577228 F6X3S4 739 aa15.01□□□□□ -0.01
CDH8-202ENST00000577228 EXOSC9Q06265 439 aaKnown RBP15.01□□□□□ -0.01
CDH8-202ENST00000577228 WDR63Q8IWG1 891 aa15.01□□□□□ -0.01
CDH8-202ENST00000577228 MTMR14Q8NCE2 650 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms