RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 HSPA1AP0DMV8 641 aaKnown RBP19.52■□□□□ 0.72
SF3B3-215ENST00000577085 HSPA1BP0DMV9 641 aaKnown RBP19.52■□□□□ 0.72
SF3B3-215ENST00000577085 VEGFBP49765 207 aa19.52■□□□□ 0.72
SF3B3-215ENST00000577085 TRMT2AQ8IZ69 625 aaKnown RBP19.52■□□□□ 0.72
SF3B3-215ENST00000577085 OGFOD1Q8N543 542 aa19.52■□□□□ 0.72
SF3B3-215ENST00000577085 HELBQ8NG08 1087 aaPredicted RBP19.52■□□□□ 0.72
SF3B3-215ENST00000577085 SUCLG2Q96I99 432 aa19.52■□□□□ 0.72
SF3B3-215ENST00000577085 ZNF594Q96JF6 807 aaPredicted RBP19.52■□□□□ 0.72
SF3B3-215ENST00000577085 RASSF10A6NK89 507 aa19.51■□□□□ 0.71
SF3B3-215ENST00000577085 GRM1Q13255 1194 aa19.51■□□□□ 0.71
SF3B3-215ENST00000577085 KRT26Q7Z3Y9 468 aa19.51■□□□□ 0.71
SF3B3-215ENST00000577085 USP48Q86UV5 1035 aa19.51■□□□□ 0.71
SF3B3-215ENST00000577085 MIER1Q8N108 512 aa19.51■□□□□ 0.71
SF3B3-215ENST00000577085 MYO3BQ8WXR4 1341 aa19.51■□□□□ 0.71
SF3B3-215ENST00000577085 SCN9AQ15858 1988 aa19.5■□□□□ 0.71
SF3B3-215ENST00000577085 EGFRP00533 1210 aa19.5■□□□□ 0.71
SF3B3-215ENST00000577085 ECE1P42892 770 aa19.5■□□□□ 0.71
SF3B3-215ENST00000577085 STRIP1Q5VSL9 837 aa19.5■□□□□ 0.71
SF3B3-215ENST00000577085 CST9Q5W186 159 aa19.5■□□□□ 0.71
SF3B3-215ENST00000577085 TXNRD3Q86VQ6 643 aa19.5■□□□□ 0.71
SF3B3-215ENST00000577085 SULF1Q8IWU6 871 aa19.5■□□□□ 0.71
SF3B3-215ENST00000577085 AIDAQ96BJ3 306 aa19.5■□□□□ 0.71
SF3B3-215ENST00000577085 BICC1Q9H694 974 aaKnown RBP19.5■□□□□ 0.71
SF3B3-215ENST00000577085 UTYO14607 1347 aa19.5■□□□□ 0.71
SF3B3-215ENST00000577085 KLRK1P26718 216 aa19.49■□□□□ 0.71
SF3B3-215ENST00000577085 ZNF280AP59817 542 aaPredicted RBP19.49■□□□□ 0.71
SF3B3-215ENST00000577085 TTLL5Q6EMB2 1281 aa19.49■□□□□ 0.71
SF3B3-215ENST00000577085 ZNF804AQ7Z570 1209 aa19.49■□□□□ 0.71
SF3B3-215ENST00000577085 MYOZ2Q9NPC6 264 aa19.49■□□□□ 0.71
SF3B3-215ENST00000577085 GGA3Q9NZ52 723 aa19.49■□□□□ 0.71
SF3B3-215ENST00000577085 ZNF609O15014 1411 aa19.49■□□□□ 0.71
SF3B3-215ENST00000577085 WDR33Q9C0J8 1336 aaKnown RBP19.49■□□□□ 0.71
SF3B3-215ENST00000577085 DACT2Q5SW24 774 aa19.48■□□□□ 0.71
SF3B3-215ENST00000577085 API5Q9BZZ5 524 aaKnown RBP19.48■□□□□ 0.71
SF3B3-215ENST00000577085 NOB1Q9ULX3 412 aaKnown RBP19.48■□□□□ 0.71
SF3B3-215ENST00000577085 TLL2Q9Y6L7 1015 aa19.48■□□□□ 0.71
SF3B3-215ENST00000577085 PCNTO95613 3336 aa19.48■□□□□ 0.71
SF3B3-215ENST00000577085 GTF2IP78347 998 aa19.47■□□□□ 0.71
SF3B3-215ENST00000577085 SCARF1Q14162 830 aa19.47■□□□□ 0.71
SF3B3-215ENST00000577085 GMLQ99445 158 aa19.47■□□□□ 0.71
SF3B3-215ENST00000577085 CD209Q9NNX6 404 aa19.47■□□□□ 0.71
SF3B3-215ENST00000577085 HDAC9Q9UKV0 1011 aa19.47■□□□□ 0.71
SF3B3-215ENST00000577085 TRPM7Q96QT4 1865 aa19.47■□□□□ 0.71
SF3B3-215ENST00000577085 SNAP23O00161 211 aa19.46■□□□□ 0.71
SF3B3-215ENST00000577085 HNRNPUQ00839 825 aaKnown RBP eCLIP19.46■□□□□ 0.71
SF3B3-215ENST00000577085 ANGEL2Q5VTE6 544 aaKnown RBP19.46■□□□□ 0.71
SF3B3-215ENST00000577085 KAZALD1Q96I82 304 aa19.46■□□□□ 0.71
SF3B3-215ENST00000577085 CAPNS2Q96L46 248 aa19.46■□□□□ 0.71
SF3B3-215ENST00000577085 MXD3Q9BW11 206 aa19.46■□□□□ 0.71
SF3B3-215ENST00000577085 USP44Q9H0E7 712 aa19.46■□□□□ 0.71
SF3B3-215ENST00000577085 MROH5Q6ZUA9 1318 aa19.46■□□□□ 0.71
SF3B3-215ENST00000577085 PSME4Q14997 1843 aa19.46■□□□□ 0.71
SF3B3-215ENST00000577085 ADM5C9JUS6 153 aa19.45■□□□□ 0.7
SF3B3-215ENST00000577085 MMP14P50281 582 aa19.45■□□□□ 0.7
SF3B3-215ENST00000577085 RABL6Q3YEC7 729 aaPredicted RBP19.45■□□□□ 0.7
SF3B3-215ENST00000577085 CYP4F22Q6NT55 531 aa19.45■□□□□ 0.7
SF3B3-215ENST00000577085 C15orf52Q6ZUT6 534 aaKnown RBP19.45■□□□□ 0.7
SF3B3-215ENST00000577085 SAPCD2Q86UD0 394 aa19.45■□□□□ 0.7
SF3B3-215ENST00000577085 HDAC5Q9UQL6 1122 aa19.45■□□□□ 0.7
SF3B3-215ENST00000577085 KIF16BQ96L93 1317 aa19.45■□□□□ 0.7
SF3B3-215ENST00000577085 UBTFL1P0CB47 393 aaPredicted RBP19.44■□□□□ 0.7
SF3B3-215ENST00000577085 RARSP54136 660 aaKnown RBP19.44■□□□□ 0.7
SF3B3-215ENST00000577085 MAP2K1Q02750 393 aaPredicted RBP19.44■□□□□ 0.7
SF3B3-215ENST00000577085 METTL24Q5JXM2 366 aa19.44■□□□□ 0.7
SF3B3-215ENST00000577085 KIAA0825Q8IV33 1275 aa19.44■□□□□ 0.7
SF3B3-215ENST00000577085 C2orf69Q8N8R5 385 aa19.44■□□□□ 0.7
SF3B3-215ENST00000577085 BEGAINQ9BUH8 593 aa19.44■□□□□ 0.7
SF3B3-215ENST00000577085 UBE4AQ14139 1066 aa19.43■□□□□ 0.7
SF3B3-215ENST00000577085 VPS37DQ86XT2 251 aa19.43■□□□□ 0.7
SF3B3-215ENST00000577085 ANKRD44Q8N8A2 993 aa19.43■□□□□ 0.7
SF3B3-215ENST00000577085 PUS3Q9BZE2 481 aaKnown RBP19.43■□□□□ 0.7
SF3B3-215ENST00000577085 ASTN2O75129 1339 aaPredicted RBP19.43■□□□□ 0.7
SF3B3-215ENST00000577085 BRPF1P55201 1214 aaPredicted RBP19.42■□□□□ 0.7
SF3B3-215ENST00000577085 HUNKP57058 714 aa19.42■□□□□ 0.7
SF3B3-215ENST00000577085 DLK2Q6UY11 383 aa19.42■□□□□ 0.7
SF3B3-215ENST00000577085 HHIPL1Q96JK4 782 aa19.42■□□□□ 0.7
SF3B3-215ENST00000577085 GBA2Q9HCG7 927 aaPredicted RBP19.42■□□□□ 0.7
SF3B3-215ENST00000577085 IPO8O15397 1037 aaKnown RBP19.41■□□□□ 0.7
SF3B3-215ENST00000577085 IL1R1P14778 569 aa19.41■□□□□ 0.7
SF3B3-215ENST00000577085 RIPOR2Q9Y4F9 1068 aa19.41■□□□□ 0.7
SF3B3-215ENST00000577085 PITPNM2Q9BZ72 1349 aa19.41■□□□□ 0.7
SF3B3-215ENST00000577085 HIBADHP31937 336 aaKnown RBP19.4■□□□□ 0.7
SF3B3-215ENST00000577085 NBPF9Q3BBW0 867 aa19.4■□□□□ 0.7
SF3B3-215ENST00000577085 CAVIN4Q5BKX8 364 aa19.4■□□□□ 0.7
SF3B3-215ENST00000577085 COL13A1Q5TAT6 717 aaPredicted RBP19.4■□□□□ 0.7
SF3B3-215ENST00000577085 IFFO2Q5TF58 517 aa19.4■□□□□ 0.7
SF3B3-215ENST00000577085 FRAT1Q92837 279 aaPredicted RBP19.4■□□□□ 0.7
SF3B3-215ENST00000577085 CDCA5Q96FF9 252 aa19.4■□□□□ 0.7
SF3B3-215ENST00000577085 A0A1B0GUL6 1792 aa19.39■□□□□ 0.7
SF3B3-215ENST00000577085 F8W031 263 aaPredicted RBP19.39■□□□□ 0.69
SF3B3-215ENST00000577085 FOXN1O15353 648 aa19.39■□□□□ 0.69
SF3B3-215ENST00000577085 FRAT2O75474 233 aaPredicted RBP19.39■□□□□ 0.69
SF3B3-215ENST00000577085 SASH1O94885 1247 aa19.39■□□□□ 0.69
SF3B3-215ENST00000577085 GYG1P46976 350 aa19.39■□□□□ 0.69
SF3B3-215ENST00000577085 CTCFP49711 727 aaPredicted RBP19.39■□□□□ 0.69
SF3B3-215ENST00000577085 LRRC24Q50LG9 513 aa19.39■□□□□ 0.69
SF3B3-215ENST00000577085 KLHDC4Q8TBB5 520 aa19.39■□□□□ 0.69
SF3B3-215ENST00000577085 ARHGAP45Q92619 1136 aa19.39■□□□□ 0.69
SF3B3-215ENST00000577085 JAG2Q9Y219 1238 aa19.39■□□□□ 0.69
SF3B3-215ENST00000577085 IRS2Q9Y4H2 1338 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms