RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 CCDC191Q8NCU4 936 aa13.11□□□□□ -0.31
NPLOC4-220ENST00000576940 CWC25Q9NXE8 425 aaPredicted RBP13.11□□□□□ -0.31
NPLOC4-220ENST00000576940 MINPP1Q9UNW1 487 aa13.11□□□□□ -0.31
NPLOC4-220ENST00000576940 ZNF609O15014 1411 aa13.11□□□□□ -0.31
NPLOC4-220ENST00000576940 NF2P35240 595 aa13.1□□□□□ -0.31
NPLOC4-220ENST00000576940 RALBP1Q15311 655 aa13.1□□□□□ -0.31
NPLOC4-220ENST00000576940 NOM1Q5C9Z4 860 aaKnown RBP13.1□□□□□ -0.31
NPLOC4-220ENST00000576940 OGFOD1Q8N543 542 aa13.1□□□□□ -0.31
NPLOC4-220ENST00000576940 MKI67P46013 3256 aaKnown RBP13.09□□□□□ -0.31
NPLOC4-220ENST00000576940 CCT4P50991 539 aaKnown RBP13.09□□□□□ -0.31
NPLOC4-220ENST00000576940 SREBF2Q12772 1141 aa13.09□□□□□ -0.31
NPLOC4-220ENST00000576940 STRIP1Q5VSL9 837 aa13.09□□□□□ -0.31
NPLOC4-220ENST00000576940 ARMC9Q7Z3E5 817 aa13.09□□□□□ -0.31
NPLOC4-220ENST00000576940 METTL22Q9BUU2 404 aaPredicted RBP13.09□□□□□ -0.31
NPLOC4-220ENST00000576940 ANGEL1Q9UNK9 670 aaKnown RBP13.09□□□□□ -0.31
NPLOC4-220ENST00000576940 ADAMTS8Q9UP79 889 aa13.09□□□□□ -0.31
NPLOC4-220ENST00000576940 PSME4Q14997 1843 aa13.09□□□□□ -0.31
NPLOC4-220ENST00000576940 POTEFA5A3E0 1075 aa13.08□□□□□ -0.32
NPLOC4-220ENST00000576940 LDLRAD1Q5T700 205 aa13.08□□□□□ -0.32
NPLOC4-220ENST00000576940 SPRYD7Q5W111 196 aa13.08□□□□□ -0.32
NPLOC4-220ENST00000576940 TTLL5Q6EMB2 1281 aa13.08□□□□□ -0.32
NPLOC4-220ENST00000576940 KIAA0825Q8IV33 1275 aa13.08□□□□□ -0.32
NPLOC4-220ENST00000576940 TTLL11Q8NHH1 800 aa13.08□□□□□ -0.32
NPLOC4-220ENST00000576940 CDC5LQ99459 802 aaKnown RBP13.08□□□□□ -0.32
NPLOC4-220ENST00000576940 CFHR5Q9BXR6 569 aa13.08□□□□□ -0.32
NPLOC4-220ENST00000576940 GREM2Q9H772 168 aa13.08□□□□□ -0.32
NPLOC4-220ENST00000576940 BSDC1Q9NW68 430 aaPredicted RBP13.08□□□□□ -0.32
NPLOC4-220ENST00000576940 TRIM17Q9Y577 477 aa13.08□□□□□ -0.32
NPLOC4-220ENST00000576940 MED23Q9ULK4 1368 aa13.07□□□□□ -0.32
NPLOC4-220ENST00000576940 CENPFP49454 3210 aa13.07□□□□□ -0.32
NPLOC4-220ENST00000576940 ZNF853P0CG23 659 aa13.07□□□□□ -0.32
NPLOC4-220ENST00000576940 CTSWP56202 376 aa13.07□□□□□ -0.32
NPLOC4-220ENST00000576940 HABP4Q5JVS0 413 aaKnown RBP13.07□□□□□ -0.32
NPLOC4-220ENST00000576940 C8orf58Q8NAV2 365 aa13.07□□□□□ -0.32
NPLOC4-220ENST00000576940 SLC10A4Q96EP9 437 aa13.07□□□□□ -0.32
NPLOC4-220ENST00000576940 COA1Q9GZY4 146 aa13.07□□□□□ -0.32
NPLOC4-220ENST00000576940 MAP3K2Q9Y2U5 619 aa13.07□□□□□ -0.32
NPLOC4-220ENST00000576940 IGKV5-2P06315 115 aa13.06□□□□□ -0.32
NPLOC4-220ENST00000576940 KLRK1P26718 216 aa13.06□□□□□ -0.32
NPLOC4-220ENST00000576940 GTF2IP78347 998 aa13.06□□□□□ -0.32
NPLOC4-220ENST00000576940 WDR43Q15061 677 aaKnown RBP eCLIP13.06□□□□□ -0.32
NPLOC4-220ENST00000576940 IFNL1Q8IU54 200 aa13.06□□□□□ -0.32
NPLOC4-220ENST00000576940 GCC1Q96CN9 775 aa13.06□□□□□ -0.32
NPLOC4-220ENST00000576940 ZBED3Q96IU2 234 aaPredicted RBP13.06□□□□□ -0.32
NPLOC4-220ENST00000576940 MYO3BQ8WXR4 1341 aa13.06□□□□□ -0.32
NPLOC4-220ENST00000576940 BRCA2P51587 3418 aa13.05□□□□□ -0.32
NPLOC4-220ENST00000576940 ALDH1A1P00352 501 aa13.05□□□□□ -0.32
NPLOC4-220ENST00000576940 OTOP1Q7RTM1 612 aa13.05□□□□□ -0.32
NPLOC4-220ENST00000576940 CLMNQ96JQ2 1002 aa13.05□□□□□ -0.32
NPLOC4-220ENST00000576940 DEFB129Q9H1M3 183 aa13.05□□□□□ -0.32
NPLOC4-220ENST00000576940 LEMD3Q9Y2U8 911 aa13.05□□□□□ -0.32
NPLOC4-220ENST00000576940 PCDHAC2Q9Y5I4 1007 aa13.05□□□□□ -0.32
NPLOC4-220ENST00000576940 PI4KAP2A4QPH2 592 aa13.04□□□□□ -0.32
NPLOC4-220ENST00000576940 MANSC4A6NHS7 340 aaPredicted RBP13.04□□□□□ -0.32
NPLOC4-220ENST00000576940 IGF2BP3O00425 579 aaKnown RBP eCLIP13.04□□□□□ -0.32
NPLOC4-220ENST00000576940 DDX58O95786 925 aaKnown RBP13.04□□□□□ -0.32
NPLOC4-220ENST00000576940 INHBEP58166 350 aa13.04□□□□□ -0.32
NPLOC4-220ENST00000576940 CWF19L2Q2TBE0 894 aaKnown RBP13.04□□□□□ -0.32
NPLOC4-220ENST00000576940 KSR2Q6VAB6 950 aa13.04□□□□□ -0.32
NPLOC4-220ENST00000576940 APOBEC3FQ8IUX4 373 aaKnown RBP13.04□□□□□ -0.32
NPLOC4-220ENST00000576940 PI4KAP1Q8N8J0 262 aa13.04□□□□□ -0.32
NPLOC4-220ENST00000576940 ZNF804BA4D1E1 1349 aa13.04□□□□□ -0.32
NPLOC4-220ENST00000576940 SNAP23O00161 211 aa13.03□□□□□ -0.32
NPLOC4-220ENST00000576940 EN2P19622 333 aaPredicted RBP13.03□□□□□ -0.32
NPLOC4-220ENST00000576940 IGHMBP2P38935 993 aaKnown RBP13.03□□□□□ -0.32
NPLOC4-220ENST00000576940 GNAI1P63096 354 aa13.03□□□□□ -0.32
NPLOC4-220ENST00000576940 INTS3Q68E01 1043 aaKnown RBP13.03□□□□□ -0.32
NPLOC4-220ENST00000576940 TSPYL6Q8N831 410 aa13.03□□□□□ -0.32
NPLOC4-220ENST00000576940 WNK4Q96J92 1243 aa13.03□□□□□ -0.32
NPLOC4-220ENST00000576940 IFT57Q9NWB7 429 aa13.03□□□□□ -0.32
NPLOC4-220ENST00000576940 PTPN22Q9Y2R2 807 aa13.03□□□□□ -0.32
NPLOC4-220ENST00000576940 MYBBP1AQ9BQG0 1328 aaKnown RBP13.03□□□□□ -0.32
NPLOC4-220ENST00000576940 HTTP42858 3142 aa13.02□□□□□ -0.32
NPLOC4-220ENST00000576940 F8W031 263 aaPredicted RBP13.02□□□□□ -0.33
NPLOC4-220ENST00000576940 H7C1W4 665 aa13.02□□□□□ -0.33
NPLOC4-220ENST00000576940 APAF1O14727 1248 aa13.02□□□□□ -0.33
NPLOC4-220ENST00000576940 MMP14P50281 582 aa13.02□□□□□ -0.33
NPLOC4-220ENST00000576940 CAP1Q01518 475 aa13.02□□□□□ -0.33
NPLOC4-220ENST00000576940 DLGAP5Q15398 846 aa13.02□□□□□ -0.33
NPLOC4-220ENST00000576940 MAP3K11Q16584 847 aa13.02□□□□□ -0.33
NPLOC4-220ENST00000576940 CCDC30Q5VVM6 783 aa13.02□□□□□ -0.33
NPLOC4-220ENST00000576940 CERS5Q8N5B7 392 aa13.02□□□□□ -0.33
NPLOC4-220ENST00000576940 CD99L2Q8TCZ2 262 aa13.02□□□□□ -0.33
NPLOC4-220ENST00000576940 CD209Q9NNX6 404 aa13.02□□□□□ -0.33
NPLOC4-220ENST00000576940 ZNF646O15015 1829 aaPredicted RBP13.02□□□□□ -0.33
NPLOC4-220ENST00000576940 CLRN2A0PK11 232 aa13.01□□□□□ -0.33
NPLOC4-220ENST00000576940 NEURL1BA8MQ27 555 aa13.01□□□□□ -0.33
NPLOC4-220ENST00000576940 PPP1R12BO60237 982 aaPredicted RBP13.01□□□□□ -0.33
NPLOC4-220ENST00000576940 USP2O75604 605 aaPredicted RBP13.01□□□□□ -0.33
NPLOC4-220ENST00000576940 ZBTB48P10074 688 aaPredicted RBP13.01□□□□□ -0.33
NPLOC4-220ENST00000576940 ITGA6P23229 1130 aa13.01□□□□□ -0.33
NPLOC4-220ENST00000576940 GJA5P36382 358 aa13.01□□□□□ -0.33
NPLOC4-220ENST00000576940 DDX10Q13206 875 aaKnown RBP13.01□□□□□ -0.33
NPLOC4-220ENST00000576940 CRHR2Q13324 411 aa13.01□□□□□ -0.33
NPLOC4-220ENST00000576940 NBPF12Q5TAG4 269 aaPredicted RBP13.01□□□□□ -0.33
NPLOC4-220ENST00000576940 UBE3BQ7Z3V4 1068 aa13.01□□□□□ -0.33
NPLOC4-220ENST00000576940 PRMT6Q96LA8 375 aaPredicted RBP13.01□□□□□ -0.33
NPLOC4-220ENST00000576940 PTPN18Q99952 460 aa13.01□□□□□ -0.33
NPLOC4-220ENST00000576940 ANKRD2Q9GZV1 360 aa13.01□□□□□ -0.33
NPLOC4-220ENST00000576940 SPEF2Q9C093 1822 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms