RNA–Protein interactions for RNA: ENST00000576112.2

TSR1-204, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 5 BASIC

Gene TSR1, Length 1,290 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-204ENST00000576112 USP17L8P0C7I0 530 aa18.88■□□□□ 0.61
TSR1-204ENST00000576112 MLLT1Q03111 559 aaPredicted RBP18.88■□□□□ 0.61
TSR1-204ENST00000576112 TXNRD3Q86VQ6 643 aa18.88■□□□□ 0.61
TSR1-204ENST00000576112 RNF186Q9NXI6 227 aa18.88■□□□□ 0.61
TSR1-204ENST00000576112 SAGE1Q9NXZ1 904 aa18.88■□□□□ 0.61
TSR1-204ENST00000576112 CACNA1FO60840 1977 aa18.88■□□□□ 0.61
TSR1-204ENST00000576112 TRPA1O75762 1119 aa18.87■□□□□ 0.61
TSR1-204ENST00000576112 KLRK1P26718 216 aa18.87■□□□□ 0.61
TSR1-204ENST00000576112 UBE3BQ7Z3V4 1068 aa18.87■□□□□ 0.61
TSR1-204ENST00000576112 CSRNP1Q96S65 589 aa18.87■□□□□ 0.61
TSR1-204ENST00000576112 PITPNM2Q9BZ72 1349 aa18.87■□□□□ 0.61
TSR1-204ENST00000576112 BSDC1Q9NW68 430 aaPredicted RBP18.87■□□□□ 0.61
TSR1-204ENST00000576112 ECM29Q5VYK3 1845 aa18.86■□□□□ 0.61
TSR1-204ENST00000576112 CCT4P50991 539 aaKnown RBP18.86■□□□□ 0.61
TSR1-204ENST00000576112 TWISTNBQ3B726 338 aaPredicted RBP18.86■□□□□ 0.61
TSR1-204ENST00000576112 NBPF9Q3BBW0 867 aa18.86■□□□□ 0.61
TSR1-204ENST00000576112 DACT2Q5SW24 774 aa18.86■□□□□ 0.61
TSR1-204ENST00000576112 PRAMEF18Q5VWM3 479 aa18.86■□□□□ 0.61
TSR1-204ENST00000576112 PODNQ7Z5L7 613 aa18.86■□□□□ 0.61
TSR1-204ENST00000576112 WWC1Q8IX03 1113 aa18.85■□□□□ 0.61
TSR1-204ENST00000576112 FBXW7Q969H0 707 aa18.85■□□□□ 0.61
TSR1-204ENST00000576112 STK31Q9BXU1 1019 aa18.85■□□□□ 0.61
TSR1-204ENST00000576112 H7C1W4 665 aa18.84■□□□□ 0.61
TSR1-204ENST00000576112 NEXNQ0ZGT2 675 aa18.84■□□□□ 0.61
TSR1-204ENST00000576112 SASH1O94885 1247 aa18.83■□□□□ 0.6
TSR1-204ENST00000576112 CASP7P55210 303 aa18.83■□□□□ 0.6
TSR1-204ENST00000576112 PDE4DIPQ5VU43 2346 aa18.83■□□□□ 0.6
TSR1-204ENST00000576112 UBE2Q2LH0YL09 131 aa18.82■□□□□ 0.6
TSR1-204ENST00000576112 SLC4A2P04920 1241 aa18.82■□□□□ 0.6
TSR1-204ENST00000576112 ITGA6P23229 1130 aa18.82■□□□□ 0.6
TSR1-204ENST00000576112 FKBP1BP68106 108 aa18.82■□□□□ 0.6
TSR1-204ENST00000576112 GCKRQ14397 625 aa18.82■□□□□ 0.6
TSR1-204ENST00000576112 CCDC27Q2M243 656 aa18.82■□□□□ 0.6
TSR1-204ENST00000576112 CHMP4AQ9BY43 222 aa18.82■□□□□ 0.6
TSR1-204ENST00000576112 LAMB1P07942 1786 aa18.81■□□□□ 0.6
TSR1-204ENST00000576112 FANCIQ9NVI1 1328 aa18.81■□□□□ 0.6
TSR1-204ENST00000576112 WNT10BO00744 389 aa18.81■□□□□ 0.6
TSR1-204ENST00000576112 FLIIQ13045 1269 aa18.81■□□□□ 0.6
TSR1-204ENST00000576112 STRIP1Q5VSL9 837 aa18.81■□□□□ 0.6
TSR1-204ENST00000576112 COA1Q9GZY4 146 aa18.81■□□□□ 0.6
TSR1-204ENST00000576112 ZNF804BA4D1E1 1349 aa18.8■□□□□ 0.6
TSR1-204ENST00000576112 SNAP23O00161 211 aa18.8■□□□□ 0.6
TSR1-204ENST00000576112 IGHMBP2P38935 993 aaKnown RBP18.8■□□□□ 0.6
TSR1-204ENST00000576112 PLA2G12BQ9BX93 195 aa18.8■□□□□ 0.6
TSR1-204ENST00000576112 MYO3BQ8WXR4 1341 aa18.79■□□□□ 0.6
TSR1-204ENST00000576112 IRS2Q9Y4H2 1338 aa18.79■□□□□ 0.6
TSR1-204ENST00000576112 SOX10P56693 466 aa18.79■□□□□ 0.6
TSR1-204ENST00000576112 KIAA0825Q8IV33 1275 aa18.79■□□□□ 0.6
TSR1-204ENST00000576112 LEMD3Q9Y2U8 911 aa18.79■□□□□ 0.6
TSR1-204ENST00000576112 IL16Q14005 1332 aa18.78■□□□□ 0.6
TSR1-204ENST00000576112 SSC5DA1L4H1 1573 aa18.78■□□□□ 0.6
TSR1-204ENST00000576112 SLC34A2O95436 690 aa18.78■□□□□ 0.6
TSR1-204ENST00000576112 CSF1RP07333 972 aa18.78■□□□□ 0.6
TSR1-204ENST00000576112 FKBP5Q13451 457 aaPredicted RBP18.78■□□□□ 0.6
TSR1-204ENST00000576112 OGFOD1Q8N543 542 aa18.78■□□□□ 0.6
TSR1-204ENST00000576112 DNAAF4Q8WXU2 420 aa18.78■□□□□ 0.6
TSR1-204ENST00000576112 ARAP2Q8WZ64 1704 aa18.77■□□□□ 0.6
TSR1-204ENST00000576112 CHRNDQ07001 517 aa18.77■□□□□ 0.6
TSR1-204ENST00000576112 MKRN3Q13064 507 aaKnown RBP18.77■□□□□ 0.6
TSR1-204ENST00000576112 OTOFQ9HC10 1997 aa18.77■□□□□ 0.59
TSR1-204ENST00000576112 TBC1D8O95759 1140 aa18.76■□□□□ 0.59
TSR1-204ENST00000576112 GTF2IP78347 998 aa18.76■□□□□ 0.59
TSR1-204ENST00000576112 PRKG1Q13976 671 aa18.76■□□□□ 0.59
TSR1-204ENST00000576112 TTLL12Q14166 644 aaPredicted RBP18.76■□□□□ 0.59
TSR1-204ENST00000576112 TTLL5Q6EMB2 1281 aa18.76■□□□□ 0.59
TSR1-204ENST00000576112 CTU1Q7Z7A3 348 aaKnown RBP18.76■□□□□ 0.59
TSR1-204ENST00000576112 CERS5Q8N5B7 392 aa18.76■□□□□ 0.59
TSR1-204ENST00000576112 LINS1Q8NG48 757 aa18.76■□□□□ 0.59
TSR1-204ENST00000576112 ZBED3Q96IU2 234 aaPredicted RBP18.76■□□□□ 0.59
TSR1-204ENST00000576112 MPHOSPH8Q99549 860 aa18.76■□□□□ 0.59
TSR1-204ENST00000576112 ANKRD2Q9GZV1 360 aa18.76■□□□□ 0.59
TSR1-204ENST00000576112 FZD1Q9UP38 647 aa18.76■□□□□ 0.59
TSR1-204ENST00000576112 PCDHAC2Q9Y5I4 1007 aa18.76■□□□□ 0.59
TSR1-204ENST00000576112 F6X3S4 739 aa18.75■□□□□ 0.59
TSR1-204ENST00000576112 HELBQ8NG08 1087 aaPredicted RBP18.75■□□□□ 0.59
TSR1-204ENST00000576112 MYH16Q9H6N6 1097 aa18.75■□□□□ 0.59
TSR1-204ENST00000576112 VAMP4O75379 141 aa18.74■□□□□ 0.59
TSR1-204ENST00000576112 TAF5LO75529 589 aa18.74■□□□□ 0.59
TSR1-204ENST00000576112 FOXO4P98177 505 aa18.74■□□□□ 0.59
TSR1-204ENST00000576112 PTPN12Q05209 780 aaKnown RBP18.74■□□□□ 0.59
TSR1-204ENST00000576112 REM2Q8IYK8 340 aaPredicted RBP18.74■□□□□ 0.59
TSR1-204ENST00000576112 ZNF296Q8WUU4 475 aaPredicted RBP18.74■□□□□ 0.59
TSR1-204ENST00000576112 CD209Q9NNX6 404 aa18.74■□□□□ 0.59
TSR1-204ENST00000576112 SALL2Q9Y467 1007 aaPredicted RBP18.74■□□□□ 0.59
TSR1-204ENST00000576112 HTTP42858 3142 aa18.74■□□□□ 0.59
TSR1-204ENST00000576112 AOX1Q06278 1338 aa18.74■□□□□ 0.59
TSR1-204ENST00000576112 COL1A1P02452 1464 aaPredicted RBP18.73■□□□□ 0.59
TSR1-204ENST00000576112 KCNJ4P48050 445 aa18.73■□□□□ 0.59
TSR1-204ENST00000576112 EXOSC9Q06265 439 aaKnown RBP18.73■□□□□ 0.59
TSR1-204ENST00000576112 APOBEC3FQ8IUX4 373 aaKnown RBP18.73■□□□□ 0.59
TSR1-204ENST00000576112 ANKRD18BA2A2Z9 1011 aa18.72■□□□□ 0.59
TSR1-204ENST00000576112 NF2P35240 595 aa18.72■□□□□ 0.59
TSR1-204ENST00000576112 EPHA10Q5JZY3 1008 aa18.72■□□□□ 0.59
TSR1-204ENST00000576112 SPINK5Q9NQ38 1064 aaPredicted RBP18.72■□□□□ 0.59
TSR1-204ENST00000576112 HPS5Q9UPZ3 1129 aa18.72■□□□□ 0.59
TSR1-204ENST00000576112 TM4SF4P48230 202 aa18.71■□□□□ 0.59
TSR1-204ENST00000576112 BEND3Q5T5X7 828 aa18.71■□□□□ 0.59
TSR1-204ENST00000576112 R3HDMLQ9H3Y0 253 aa18.71■□□□□ 0.59
TSR1-204ENST00000576112 HDAC9Q9UKV0 1011 aa18.71■□□□□ 0.59
TSR1-204ENST00000576112 JAG2Q9Y219 1238 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms