RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 ZBTB12Q9Y330 459 aaPredicted RBP9.85□□□□□ -0.83
CCDC40-215ENST00000576033 APBB1O00213 710 aa9.84□□□□□ -0.83
CCDC40-215ENST00000576033 PSMD14O00487 310 aa9.84□□□□□ -0.83
CCDC40-215ENST00000576033 ATP8B2P98198 1209 aa9.84□□□□□ -0.83
CCDC40-215ENST00000576033 CXCL9Q07325 125 aa9.84□□□□□ -0.83
CCDC40-215ENST00000576033 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.84□□□□□ -0.83
CCDC40-215ENST00000576033 SUPT20HQ8NEM7 779 aa9.84□□□□□ -0.83
CCDC40-215ENST00000576033 SSH3Q8TE77 659 aa9.84□□□□□ -0.83
CCDC40-215ENST00000576033 FBXW7Q969H0 707 aa9.84□□□□□ -0.83
CCDC40-215ENST00000576033 BCL11AQ9H165 835 aa9.84□□□□□ -0.83
CCDC40-215ENST00000576033 RRAGCQ9HB90 399 aa9.84□□□□□ -0.83
CCDC40-215ENST00000576033 COPRSQ9NQ92 184 aa9.84□□□□□ -0.83
CCDC40-215ENST00000576033 PPP4R2Q9NY27 417 aa9.84□□□□□ -0.83
CCDC40-215ENST00000576033 TLR7Q9NYK1 1049 aaKnown RBP9.84□□□□□ -0.83
CCDC40-215ENST00000576033 PCDHB15Q9Y5E8 787 aa9.84□□□□□ -0.83
CCDC40-215ENST00000576033 MYO5AQ9Y4I1 1855 aaKnown RBP9.84□□□□□ -0.83
CCDC40-215ENST00000576033 SCN4AP35499 1836 aa9.84□□□□□ -0.83
CCDC40-215ENST00000576033 MROH5Q6ZUA9 1318 aa9.83□□□□□ -0.84
CCDC40-215ENST00000576033 GLTPD2A6NH11 291 aa9.83□□□□□ -0.84
CCDC40-215ENST00000576033 KIF3CO14782 793 aa9.83□□□□□ -0.84
CCDC40-215ENST00000576033 SASH1O94885 1247 aa9.83□□□□□ -0.84
CCDC40-215ENST00000576033 EGFRP00533 1210 aa9.83□□□□□ -0.84
CCDC40-215ENST00000576033 FGFR2P21802 821 aa9.83□□□□□ -0.84
CCDC40-215ENST00000576033 GMPSP49915 693 aaPredicted RBP9.83□□□□□ -0.84
CCDC40-215ENST00000576033 SCNN1DP51172 638 aa9.83□□□□□ -0.84
CCDC40-215ENST00000576033 GRIK5Q16478 980 aa9.83□□□□□ -0.84
CCDC40-215ENST00000576033 JDP2Q8WYK2 163 aa9.83□□□□□ -0.84
CCDC40-215ENST00000576033 ANKRD2Q9GZV1 360 aa9.83□□□□□ -0.84
CCDC40-215ENST00000576033 GPBP1L1Q9HC44 474 aaPredicted RBP9.83□□□□□ -0.84
CCDC40-215ENST00000576033 ZNRF3Q9ULT6 936 aa9.83□□□□□ -0.84
CCDC40-215ENST00000576033 CIAO1O76071 339 aa9.82□□□□□ -0.84
CCDC40-215ENST00000576033 PDE8BO95263 885 aa9.82□□□□□ -0.84
CCDC40-215ENST00000576033 MS4A1P11836 297 aa9.82□□□□□ -0.84
CCDC40-215ENST00000576033 EPS15P42566 896 aa9.82□□□□□ -0.84
CCDC40-215ENST00000576033 BCAMP50895 628 aa9.82□□□□□ -0.84
CCDC40-215ENST00000576033 EYA3Q99504 573 aa9.82□□□□□ -0.84
CCDC40-215ENST00000576033 ZC3H12CQ9C0D7 883 aaKnown RBP9.82□□□□□ -0.84
CCDC40-215ENST00000576033 LEMD3Q9Y2U8 911 aa9.82□□□□□ -0.84
CCDC40-215ENST00000576033 PCDHAC2Q9Y5I4 1007 aa9.82□□□□□ -0.84
CCDC40-215ENST00000576033 ZC3H4Q9UPT8 1303 aaKnown RBP9.82□□□□□ -0.84
CCDC40-215ENST00000576033 SMARCA5O60264 1052 aaPredicted RBP9.81□□□□□ -0.84
CCDC40-215ENST00000576033 SURF6O75683 361 aaKnown RBP9.81□□□□□ -0.84
CCDC40-215ENST00000576033 PHKA1P46020 1223 aa9.81□□□□□ -0.84
CCDC40-215ENST00000576033 EIF6P56537 245 aaKnown RBP9.81□□□□□ -0.84
CCDC40-215ENST00000576033 TIMM10P62072 90 aa9.81□□□□□ -0.84
CCDC40-215ENST00000576033 PUM3Q15397 648 aaKnown RBP9.81□□□□□ -0.84
CCDC40-215ENST00000576033 ATP2B3Q16720 1220 aa9.81□□□□□ -0.84
CCDC40-215ENST00000576033 GRIPAP1Q4V328 841 aa9.81□□□□□ -0.84
CCDC40-215ENST00000576033 CERS5Q8N5B7 392 aa9.81□□□□□ -0.84
CCDC40-215ENST00000576033 TRPM4Q8TD43 1214 aa9.81□□□□□ -0.84
CCDC40-215ENST00000576033 FAM84BQ96KN1 310 aaPredicted RBP9.81□□□□□ -0.84
CCDC40-215ENST00000576033 CD209Q9NNX6 404 aa9.81□□□□□ -0.84
CCDC40-215ENST00000576033 IL1RAPL2Q9NP60 686 aa9.81□□□□□ -0.84
CCDC40-215ENST00000576033 AKAP11Q9UKA4 1901 aa9.81□□□□□ -0.84
CCDC40-215ENST00000576033 ASTN2O75129 1339 aaPredicted RBP9.81□□□□□ -0.84
CCDC40-215ENST00000576033 AOX1Q06278 1338 aa9.81□□□□□ -0.84
CCDC40-215ENST00000576033 A0A1B0GUL7 405 aa9.8□□□□□ -0.84
CCDC40-215ENST00000576033 IL15P40933 162 aaPredicted RBP9.8□□□□□ -0.84
CCDC40-215ENST00000576033 GTF2IP78347 998 aa9.8□□□□□ -0.84
CCDC40-215ENST00000576033 OS9Q13438 667 aaPredicted RBP9.8□□□□□ -0.84
CCDC40-215ENST00000576033 SCARF1Q14162 830 aa9.8□□□□□ -0.84
CCDC40-215ENST00000576033 CIAPIN1Q6FI81 312 aa9.8□□□□□ -0.84
CCDC40-215ENST00000576033 PI16Q6UXB8 463 aa9.8□□□□□ -0.84
CCDC40-215ENST00000576033 DLK2Q6UY11 383 aa9.8□□□□□ -0.84
CCDC40-215ENST00000576033 SCAF8Q9UPN6 1271 aaKnown RBP9.8□□□□□ -0.84
CCDC40-215ENST00000576033 KDM2BQ8NHM5 1336 aa9.8□□□□□ -0.84
CCDC40-215ENST00000576033 MAST2Q6P0Q8 1798 aa9.79□□□□□ -0.84
CCDC40-215ENST00000576033 F8W031 263 aaPredicted RBP9.79□□□□□ -0.84
CCDC40-215ENST00000576033 G3V3G9 751 aa9.79□□□□□ -0.84
CCDC40-215ENST00000576033 FMR1Q06787 632 aaKnown RBP eCLIP9.79□□□□□ -0.84
CCDC40-215ENST00000576033 CHAF1AQ13111 956 aaPredicted RBP9.79□□□□□ -0.84
CCDC40-215ENST00000576033 UBE4AQ14139 1066 aa9.79□□□□□ -0.84
CCDC40-215ENST00000576033 DACT2Q5SW24 774 aa9.79□□□□□ -0.84
CCDC40-215ENST00000576033 DCAF8Q5TAQ9 597 aa9.79□□□□□ -0.84
CCDC40-215ENST00000576033 GPC2Q8N158 579 aa9.79□□□□□ -0.84
CCDC40-215ENST00000576033 L3MBTL3Q96JM7 780 aaPredicted RBP9.79□□□□□ -0.84
CCDC40-215ENST00000576033 DBNDD2Q9BQY9 259 aa9.79□□□□□ -0.84
CCDC40-215ENST00000576033 COA1Q9GZY4 146 aa9.79□□□□□ -0.84
CCDC40-215ENST00000576033 CEP126Q9P2H0 1117 aa9.79□□□□□ -0.84
CCDC40-215ENST00000576033 NDUFB9Q9Y6M9 179 aa9.79□□□□□ -0.84
CCDC40-215ENST00000576033 CEP350Q5VT06 3117 aa9.79□□□□□ -0.84
CCDC40-215ENST00000576033 ECM29Q5VYK3 1845 aa9.79□□□□□ -0.84
CCDC40-215ENST00000576033 SLC5A1P13866 664 aa9.78□□□□□ -0.84
CCDC40-215ENST00000576033 IL1R1P14778 569 aa9.78□□□□□ -0.84
CCDC40-215ENST00000576033 EPHX2P34913 555 aa9.78□□□□□ -0.84
CCDC40-215ENST00000576033 G3BP1Q13283 466 aaKnown RBP eCLIP9.78□□□□□ -0.84
CCDC40-215ENST00000576033 TBC1D10BQ4KMP7 808 aaPredicted RBP9.78□□□□□ -0.84
CCDC40-215ENST00000576033 EAPPQ56P03 285 aaPredicted RBP9.78□□□□□ -0.84
CCDC40-215ENST00000576033 TNNI3KQ59H18 835 aa9.78□□□□□ -0.84
CCDC40-215ENST00000576033 RSBN1LQ6PCB5 846 aaPredicted RBP9.78□□□□□ -0.84
CCDC40-215ENST00000576033 C15orf52Q6ZUT6 534 aaKnown RBP9.78□□□□□ -0.84
CCDC40-215ENST00000576033 SAMD7Q7Z3H4 446 aa9.78□□□□□ -0.84
CCDC40-215ENST00000576033 ZNF804AQ7Z570 1209 aa9.78□□□□□ -0.84
CCDC40-215ENST00000576033 FBXO33Q7Z6M2 555 aa9.78□□□□□ -0.84
CCDC40-215ENST00000576033 KIAA0825Q8IV33 1275 aa9.78□□□□□ -0.84
CCDC40-215ENST00000576033 MICALL2Q8IY33 904 aa9.78□□□□□ -0.84
CCDC40-215ENST00000576033 LPIN2Q92539 896 aa9.78□□□□□ -0.84
CCDC40-215ENST00000576033 EAF2Q96CJ1 260 aaPredicted RBP9.78□□□□□ -0.84
CCDC40-215ENST00000576033 XAGE2Q96GT9 111 aa9.78□□□□□ -0.84
CCDC40-215ENST00000576033 CCDC8Q9H0W5 538 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms