RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 TBC1D9Q6ZT07 1266 aa9.19□□□□□ -0.94
TOM1L1-220ENST00000575333 HNRNPLLQ8WVV9 542 aaKnown RBP9.19□□□□□ -0.94
TOM1L1-220ENST00000575333 ZKSCAN4Q969J2 545 aaPredicted RBP9.19□□□□□ -0.94
TOM1L1-220ENST00000575333 FUT8Q9BYC5 575 aa9.19□□□□□ -0.94
TOM1L1-220ENST00000575333 DDX19BQ9UMR2 479 aa9.19□□□□□ -0.94
TOM1L1-220ENST00000575333 ATP6V1DQ9Y5K8 247 aa9.19□□□□□ -0.94
TOM1L1-220ENST00000575333 SYCP2Q9BX26 1530 aa9.18□□□□□ -0.94
TOM1L1-220ENST00000575333 AHCYL1O43865 530 aa9.18□□□□□ -0.94
TOM1L1-220ENST00000575333 AP1G2O75843 785 aa9.18□□□□□ -0.94
TOM1L1-220ENST00000575333 SASH3O75995 380 aa9.18□□□□□ -0.94
TOM1L1-220ENST00000575333 RTN3O95197 1032 aaPredicted RBP9.18□□□□□ -0.94
TOM1L1-220ENST00000575333 RARSP54136 660 aaKnown RBP9.18□□□□□ -0.94
TOM1L1-220ENST00000575333 LRMPQ12912 555 aa9.18□□□□□ -0.94
TOM1L1-220ENST00000575333 SLMAPQ14BN4 828 aa9.18□□□□□ -0.94
TOM1L1-220ENST00000575333 LRRFIP1Q32MZ4 808 aaKnown RBP9.18□□□□□ -0.94
TOM1L1-220ENST00000575333 CDCA2Q69YH5 1023 aaPredicted RBP9.18□□□□□ -0.94
TOM1L1-220ENST00000575333 SPATA21Q7Z572 469 aa9.18□□□□□ -0.94
TOM1L1-220ENST00000575333 MFN1Q8IWA4 741 aa9.18□□□□□ -0.94
TOM1L1-220ENST00000575333 LRRC8AQ8IWT6 810 aa9.18□□□□□ -0.94
TOM1L1-220ENST00000575333 CARD11Q9BXL7 1154 aa9.18□□□□□ -0.94
TOM1L1-220ENST00000575333 USP26Q9BXU7 913 aa9.18□□□□□ -0.94
TOM1L1-220ENST00000575333 ATP6V0A4Q9HBG4 840 aa9.18□□□□□ -0.94
TOM1L1-220ENST00000575333 VPS18Q9P253 973 aa9.18□□□□□ -0.94
TOM1L1-220ENST00000575333 SUN2Q9UH99 717 aa9.18□□□□□ -0.94
TOM1L1-220ENST00000575333 RICTORQ6R327 1708 aa9.18□□□□□ -0.94
TOM1L1-220ENST00000575333 RTL1A6NKG5 1358 aa9.17□□□□□ -0.94
TOM1L1-220ENST00000575333 NUTM2FA1L443 756 aa9.17□□□□□ -0.94
TOM1L1-220ENST00000575333 EBAG9O00559 213 aa9.17□□□□□ -0.94
TOM1L1-220ENST00000575333 AP5Z1O43299 807 aa9.17□□□□□ -0.94
TOM1L1-220ENST00000575333 FSBPO95073 299 aa9.17□□□□□ -0.94
TOM1L1-220ENST00000575333 TUBBP07437 444 aa9.17□□□□□ -0.94
TOM1L1-220ENST00000575333 APOBRQ0VD83 1088 aa9.17□□□□□ -0.94
TOM1L1-220ENST00000575333 SARM1Q6SZW1 724 aa9.17□□□□□ -0.94
TOM1L1-220ENST00000575333 CWC27Q6UX04 472 aaKnown RBP9.17□□□□□ -0.94
TOM1L1-220ENST00000575333 HDXQ7Z353 690 aa9.17□□□□□ -0.94
TOM1L1-220ENST00000575333 TDRD7Q8NHU6 1098 aaKnown RBP9.17□□□□□ -0.94
TOM1L1-220ENST00000575333 SNRNP27Q8WVK2 155 aaKnown RBP9.17□□□□□ -0.94
TOM1L1-220ENST00000575333 CCDC34Q96HJ3 373 aa9.17□□□□□ -0.94
TOM1L1-220ENST00000575333 MRFAP1L1Q96HT8 127 aa9.17□□□□□ -0.94
TOM1L1-220ENST00000575333 OSBPL9Q96SU4 736 aa9.17□□□□□ -0.94
TOM1L1-220ENST00000575333 RMI1Q9H9A7 625 aa9.17□□□□□ -0.94
TOM1L1-220ENST00000575333 ZCCHC17Q9NP64 241 aaKnown RBP9.17□□□□□ -0.94
TOM1L1-220ENST00000575333 AKAP2Q9Y2D5 859 aa9.17□□□□□ -0.94
TOM1L1-220ENST00000575333 FRMPD1Q5SYB0 1578 aa9.17□□□□□ -0.94
TOM1L1-220ENST00000575333 MAP3K5Q99683 1374 aa9.17□□□□□ -0.94
TOM1L1-220ENST00000575333 PDLIM1O00151 329 aa9.17□□□□□ -0.94
TOM1L1-220ENST00000575333 ERLIN1O75477 346 aa9.17□□□□□ -0.94
TOM1L1-220ENST00000575333 FOSBP53539 338 aa9.17□□□□□ -0.94
TOM1L1-220ENST00000575333 CUL4AQ13619 759 aa9.17□□□□□ -0.94
TOM1L1-220ENST00000575333 USP48Q86UV5 1035 aa9.17□□□□□ -0.94
TOM1L1-220ENST00000575333 AFAP1Q8N556 730 aa9.17□□□□□ -0.94
TOM1L1-220ENST00000575333 CACTINQ8WUQ7 758 aaKnown RBP9.17□□□□□ -0.94
TOM1L1-220ENST00000575333 C17orf50Q8WW18 174 aa9.17□□□□□ -0.94
TOM1L1-220ENST00000575333 RABGGTAQ92696 567 aa9.17□□□□□ -0.94
TOM1L1-220ENST00000575333 RBM33Q96EV2 1170 aaKnown RBP9.17□□□□□ -0.94
TOM1L1-220ENST00000575333 DTNBP1Q96EV8 351 aa9.17□□□□□ -0.94
TOM1L1-220ENST00000575333 RMDN2Q96LZ7 410 aa9.17□□□□□ -0.94
TOM1L1-220ENST00000575333 TRIM5Q9C035 493 aa9.17□□□□□ -0.94
TOM1L1-220ENST00000575333 LHX6Q9UPM6 363 aa9.17□□□□□ -0.94
TOM1L1-220ENST00000575333 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.17□□□□□ -0.94
TOM1L1-220ENST00000575333 POGZQ7Z3K3 1410 aa9.16□□□□□ -0.94
TOM1L1-220ENST00000575333 A6NNZ2 444 aa9.16□□□□□ -0.94
TOM1L1-220ENST00000575333 ZSCAN9O15535 394 aaPredicted RBP9.16□□□□□ -0.94
TOM1L1-220ENST00000575333 FESP07332 822 aa9.16□□□□□ -0.94
TOM1L1-220ENST00000575333 NBPF7P0C2Y1 421 aaPredicted RBP9.16□□□□□ -0.94
TOM1L1-220ENST00000575333 HOXB1P14653 301 aaPredicted RBP9.16□□□□□ -0.94
TOM1L1-220ENST00000575333 ARHGAP25P42331 645 aa9.16□□□□□ -0.94
TOM1L1-220ENST00000575333 LIG3P49916 1009 aa9.16□□□□□ -0.94
TOM1L1-220ENST00000575333 NAP1L1P55209 391 aaKnown RBP9.16□□□□□ -0.94
TOM1L1-220ENST00000575333 G3BP1Q13283 466 aaKnown RBP eCLIP9.16□□□□□ -0.94
TOM1L1-220ENST00000575333 IQCB1Q15051 598 aa9.16□□□□□ -0.94
TOM1L1-220ENST00000575333 TUBB8Q3ZCM7 444 aa9.16□□□□□ -0.94
TOM1L1-220ENST00000575333 PLEKHO1Q53GL0 409 aaPredicted RBP9.16□□□□□ -0.94
TOM1L1-220ENST00000575333 CHD1LQ86WJ1 897 aa9.16□□□□□ -0.94
TOM1L1-220ENST00000575333 ZNF454Q8N9F8 522 aa9.16□□□□□ -0.94
TOM1L1-220ENST00000575333 RSRC1Q96IZ7 334 aaKnown RBP9.16□□□□□ -0.94
TOM1L1-220ENST00000575333 AGAP3Q96P47 875 aa9.16□□□□□ -0.94
TOM1L1-220ENST00000575333 SLX1AQ9BQ83 275 aa9.16□□□□□ -0.94
TOM1L1-220ENST00000575333 TRAPPC8Q9Y2L5 1435 aa9.16□□□□□ -0.94
TOM1L1-220ENST00000575333 ZNF518AQ6AHZ1 1483 aa9.16□□□□□ -0.94
TOM1L1-220ENST00000575333 GOLGA6L10A6NI86 522 aa9.15□□□□□ -0.94
TOM1L1-220ENST00000575333 GPR37O15354 613 aa9.15□□□□□ -0.94
TOM1L1-220ENST00000575333 ALDH1B1P30837 517 aa9.15□□□□□ -0.94
TOM1L1-220ENST00000575333 SLC8A1P32418 973 aa9.15□□□□□ -0.94
TOM1L1-220ENST00000575333 CCDC178Q5BJE1 867 aa9.15□□□□□ -0.94
TOM1L1-220ENST00000575333 ZKSCAN2Q63HK3 967 aa9.15□□□□□ -0.94
TOM1L1-220ENST00000575333 SPTY2D1Q68D10 685 aaPredicted RBP9.15□□□□□ -0.94
TOM1L1-220ENST00000575333 APLFQ8IW19 511 aaPredicted RBP9.15□□□□□ -0.94
TOM1L1-220ENST00000575333 ZGPATQ8N5A5 531 aaKnown RBP9.15□□□□□ -0.94
TOM1L1-220ENST00000575333 PROCA1Q8NCQ7 364 aaPredicted RBP9.15□□□□□ -0.94
TOM1L1-220ENST00000575333 OR8K1Q8NGG5 319 aa9.15□□□□□ -0.94
TOM1L1-220ENST00000575333 GCC1Q96CN9 775 aa9.15□□□□□ -0.94
TOM1L1-220ENST00000575333 XAGE2Q96GT9 111 aa9.15□□□□□ -0.94
TOM1L1-220ENST00000575333 GBP3Q9H0R5 595 aa9.15□□□□□ -0.94
TOM1L1-220ENST00000575333 RGL1Q9NZL6 768 aa9.15□□□□□ -0.94
TOM1L1-220ENST00000575333 SHANK2Q9UPX8 1470 aa9.15□□□□□ -0.94
TOM1L1-220ENST00000575333 RPAP1Q9BWH6 1393 aaPredicted RBP9.15□□□□□ -0.95
TOM1L1-220ENST00000575333 H3BQF6 201 aa9.15□□□□□ -0.95
TOM1L1-220ENST00000575333 EXOC5O00471 708 aa9.15□□□□□ -0.95
TOM1L1-220ENST00000575333 LIN7AO14910 233 aaPredicted RBP9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms