RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 MINPP1Q9UNW1 487 aa13.38□□□□□ -0.27
TVP23B-208ENST00000575261 MYO3BQ8WXR4 1341 aa13.38□□□□□ -0.27
TVP23B-208ENST00000575261 AKAP11Q9UKA4 1901 aa13.37□□□□□ -0.27
TVP23B-208ENST00000575261 IGHMBP2P38935 993 aaKnown RBP13.37□□□□□ -0.27
TVP23B-208ENST00000575261 CCT4P50991 539 aaKnown RBP13.37□□□□□ -0.27
TVP23B-208ENST00000575261 FAM161AQ3B820 660 aa13.37□□□□□ -0.27
TVP23B-208ENST00000575261 MYH16Q9H6N6 1097 aa13.37□□□□□ -0.27
TVP23B-208ENST00000575261 CACNA1FO60840 1977 aa13.37□□□□□ -0.27
TVP23B-208ENST00000575261 H7C1W4 665 aa13.36□□□□□ -0.27
TVP23B-208ENST00000575261 SLC4A2P04920 1241 aa13.36□□□□□ -0.27
TVP23B-208ENST00000575261 FKBP1BP68106 108 aa13.36□□□□□ -0.27
TVP23B-208ENST00000575261 KIF23Q02241 960 aaPredicted RBP13.36□□□□□ -0.27
TVP23B-208ENST00000575261 FLIIQ13045 1269 aa13.36□□□□□ -0.27
TVP23B-208ENST00000575261 CCDC184Q52MB2 194 aa13.36□□□□□ -0.27
TVP23B-208ENST00000575261 NCBP3Q53F19 620 aaKnown RBP13.36□□□□□ -0.27
TVP23B-208ENST00000575261 G2E3Q7L622 706 aa13.36□□□□□ -0.27
TVP23B-208ENST00000575261 OGFOD1Q8N543 542 aa13.36□□□□□ -0.27
TVP23B-208ENST00000575261 FANCIQ9NVI1 1328 aa13.36□□□□□ -0.27
TVP23B-208ENST00000575261 ITGA6P23229 1130 aa13.35□□□□□ -0.27
TVP23B-208ENST00000575261 FKBP5Q13451 457 aaPredicted RBP13.35□□□□□ -0.27
TVP23B-208ENST00000575261 DGKZQ13574 1117 aa13.35□□□□□ -0.27
TVP23B-208ENST00000575261 GCKRQ14397 625 aa13.35□□□□□ -0.27
TVP23B-208ENST00000575261 DACT2Q5SW24 774 aa13.35□□□□□ -0.27
TVP23B-208ENST00000575261 STRIP1Q5VSL9 837 aa13.35□□□□□ -0.27
TVP23B-208ENST00000575261 RASAL3Q86YV0 1011 aa13.35□□□□□ -0.27
TVP23B-208ENST00000575261 FBXW7Q969H0 707 aa13.35□□□□□ -0.27
TVP23B-208ENST00000575261 PLA2G12BQ9BX93 195 aa13.35□□□□□ -0.27
TVP23B-208ENST00000575261 COA1Q9GZY4 146 aa13.35□□□□□ -0.27
TVP23B-208ENST00000575261 LEMD3Q9Y2U8 911 aa13.35□□□□□ -0.27
TVP23B-208ENST00000575261 WTIPA6NIX2 430 aaPredicted RBP13.34□□□□□ -0.27
TVP23B-208ENST00000575261 REM2Q8IYK8 340 aaPredicted RBP13.34□□□□□ -0.27
TVP23B-208ENST00000575261 DNAAF4Q8WXU2 420 aa13.34□□□□□ -0.27
TVP23B-208ENST00000575261 MPHOSPH8Q99549 860 aa13.34□□□□□ -0.27
TVP23B-208ENST00000575261 ANKRD2Q9GZV1 360 aa13.34□□□□□ -0.27
TVP23B-208ENST00000575261 TNRC18O15417 2968 aaPredicted RBP13.34□□□□□ -0.27
TVP23B-208ENST00000575261 ZNF804BA4D1E1 1349 aa13.34□□□□□ -0.27
TVP23B-208ENST00000575261 A0A1B0GUL6 1792 aa13.33□□□□□ -0.28
TVP23B-208ENST00000575261 TRPA1O75762 1119 aa13.33□□□□□ -0.28
TVP23B-208ENST00000575261 RGS19P49795 217 aa13.33□□□□□ -0.28
TVP23B-208ENST00000575261 MMP14P50281 582 aa13.33□□□□□ -0.28
TVP23B-208ENST00000575261 CASP7P55210 303 aa13.33□□□□□ -0.28
TVP23B-208ENST00000575261 MLLT1Q03111 559 aaPredicted RBP13.33□□□□□ -0.28
TVP23B-208ENST00000575261 NBPF9Q3BBW0 867 aa13.33□□□□□ -0.28
TVP23B-208ENST00000575261 LINS1Q8NG48 757 aa13.33□□□□□ -0.28
TVP23B-208ENST00000575261 MRS2Q9HD23 443 aa13.33□□□□□ -0.28
TVP23B-208ENST00000575261 RNF186Q9NXI6 227 aa13.33□□□□□ -0.28
TVP23B-208ENST00000575261 WNT10BO00744 389 aa13.32□□□□□ -0.28
TVP23B-208ENST00000575261 KCNJ4P48050 445 aa13.32□□□□□ -0.28
TVP23B-208ENST00000575261 TXNRD3Q86VQ6 643 aa13.32□□□□□ -0.28
TVP23B-208ENST00000575261 CSRNP1Q96S65 589 aa13.32□□□□□ -0.28
TVP23B-208ENST00000575261 MXD3Q9BW11 206 aa13.32□□□□□ -0.28
TVP23B-208ENST00000575261 HDAC9Q9UKV0 1011 aa13.32□□□□□ -0.28
TVP23B-208ENST00000575261 SASH1O94885 1247 aa13.31□□□□□ -0.28
TVP23B-208ENST00000575261 CSF1RP07333 972 aa13.31□□□□□ -0.28
TVP23B-208ENST00000575261 KLRK1P26718 216 aa13.31□□□□□ -0.28
TVP23B-208ENST00000575261 NF2P35240 595 aa13.31□□□□□ -0.28
TVP23B-208ENST00000575261 TTLL5Q6EMB2 1281 aa13.31□□□□□ -0.28
TVP23B-208ENST00000575261 APOBEC3FQ8IUX4 373 aaKnown RBP13.31□□□□□ -0.28
TVP23B-208ENST00000575261 SCAF8Q9UPN6 1271 aaKnown RBP13.31□□□□□ -0.28
TVP23B-208ENST00000575261 COL1A1P02452 1464 aaPredicted RBP13.3□□□□□ -0.28
TVP23B-208ENST00000575261 ANKRD18BA2A2Z9 1011 aa13.3□□□□□ -0.28
TVP23B-208ENST00000575261 CHRNDQ07001 517 aa13.3□□□□□ -0.28
TVP23B-208ENST00000575261 TTLL12Q14166 644 aaPredicted RBP13.3□□□□□ -0.28
TVP23B-208ENST00000575261 KIAA0825Q8IV33 1275 aa13.3□□□□□ -0.28
TVP23B-208ENST00000575261 WDR63Q8IWG1 891 aa13.3□□□□□ -0.28
TVP23B-208ENST00000575261 VAMP4O75379 141 aa13.29□□□□□ -0.28
TVP23B-208ENST00000575261 GTF2IP78347 998 aa13.29□□□□□ -0.28
TVP23B-208ENST00000575261 IFIT5Q13325 482 aaKnown RBP13.29□□□□□ -0.28
TVP23B-208ENST00000575261 PRAMEF18Q5VWM3 479 aa13.29□□□□□ -0.28
TVP23B-208ENST00000575261 MOB2Q70IA6 237 aa13.29□□□□□ -0.28
TVP23B-208ENST00000575261 ECM29Q5VYK3 1845 aa13.29□□□□□ -0.28
TVP23B-208ENST00000575261 UBE2Q2LH0YL09 131 aa13.28□□□□□ -0.28
TVP23B-208ENST00000575261 ANP32CO43423 234 aa13.28□□□□□ -0.28
TVP23B-208ENST00000575261 EXOSC9Q06265 439 aaKnown RBP13.28□□□□□ -0.28
TVP23B-208ENST00000575261 CD209Q9NNX6 404 aa13.28□□□□□ -0.28
TVP23B-208ENST00000575261 CHMP3Q9Y3E7 222 aa13.28□□□□□ -0.28
TVP23B-208ENST00000575261 SALL2Q9Y467 1007 aaPredicted RBP13.28□□□□□ -0.28
TVP23B-208ENST00000575261 F6X3S4 739 aa13.27□□□□□ -0.29
TVP23B-208ENST00000575261 C15orf52Q6ZUT6 534 aaKnown RBP13.27□□□□□ -0.29
TVP23B-208ENST00000575261 CTU1Q7Z7A3 348 aaKnown RBP13.27□□□□□ -0.29
TVP23B-208ENST00000575261 TAF5LO75529 589 aa13.26□□□□□ -0.29
TVP23B-208ENST00000575261 FOXO4P98177 505 aa13.26□□□□□ -0.29
TVP23B-208ENST00000575261 SREBF2Q12772 1141 aa13.26□□□□□ -0.29
TVP23B-208ENST00000575261 TAF7LQ5H9L4 462 aa13.26□□□□□ -0.29
TVP23B-208ENST00000575261 BEND3Q5T5X7 828 aa13.26□□□□□ -0.29
TVP23B-208ENST00000575261 ARMC9Q7Z3E5 817 aa13.26□□□□□ -0.29
TVP23B-208ENST00000575261 ZNF804AQ7Z570 1209 aa13.26□□□□□ -0.29
TVP23B-208ENST00000575261 ZBED3Q96IU2 234 aaPredicted RBP13.26□□□□□ -0.29
TVP23B-208ENST00000575261 IRS2Q9Y4H2 1338 aa13.26□□□□□ -0.29
TVP23B-208ENST00000575261 HTTP42858 3142 aa13.26□□□□□ -0.29
TVP23B-208ENST00000575261 SNAP23O00161 211 aa13.25□□□□□ -0.29
TVP23B-208ENST00000575261 GRM8O00222 908 aa13.25□□□□□ -0.29
TVP23B-208ENST00000575261 DLGAP5Q15398 846 aa13.25□□□□□ -0.29
TVP23B-208ENST00000575261 CCDC57Q2TAC2 916 aa13.25□□□□□ -0.29
TVP23B-208ENST00000575261 MTMR14Q8NCE2 650 aa13.25□□□□□ -0.29
TVP23B-208ENST00000575261 ARAP2Q8WZ64 1704 aa13.25□□□□□ -0.29
TVP23B-208ENST00000575261 MYO1BO43795 1136 aa13.24□□□□□ -0.29
TVP23B-208ENST00000575261 IL1R1P14778 569 aa13.24□□□□□ -0.29
TVP23B-208ENST00000575261 TM4SF4P48230 202 aa13.24□□□□□ -0.29
TVP23B-208ENST00000575261 FKBP1AP62942 108 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms