RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.94□□□□□ -0.66
SMG6-216ENST00000575176 DOCK2Q92608 1830 aa10.93□□□□□ -0.66
SMG6-216ENST00000575176 FGFR2P21802 821 aa10.93□□□□□ -0.66
SMG6-216ENST00000575176 HTRA3P83110 453 aa10.93□□□□□ -0.66
SMG6-216ENST00000575176 DACT2Q5SW24 774 aa10.93□□□□□ -0.66
SMG6-216ENST00000575176 CERS5Q8N5B7 392 aa10.93□□□□□ -0.66
SMG6-216ENST00000575176 DNAJC5GQ8N7S2 189 aa10.93□□□□□ -0.66
SMG6-216ENST00000575176 PGAP2Q9UHJ9 254 aa10.93□□□□□ -0.66
SMG6-216ENST00000575176 CDK5RAP2Q96SN8 1893 aa10.93□□□□□ -0.66
SMG6-216ENST00000575176 ZNF280AP59817 542 aaPredicted RBP10.92□□□□□ -0.66
SMG6-216ENST00000575176 CHADLQ6NUI6 762 aa10.92□□□□□ -0.66
SMG6-216ENST00000575176 DPF2Q92785 391 aa10.92□□□□□ -0.66
SMG6-216ENST00000575176 CLUAP1Q96AJ1 413 aa10.92□□□□□ -0.66
SMG6-216ENST00000575176 MPHOSPH8Q99549 860 aa10.92□□□□□ -0.66
SMG6-216ENST00000575176 MXD3Q9BW11 206 aa10.92□□□□□ -0.66
SMG6-216ENST00000575176 ANKRD2Q9GZV1 360 aa10.92□□□□□ -0.66
SMG6-216ENST00000575176 CHMP3Q9Y3E7 222 aa10.92□□□□□ -0.66
SMG6-216ENST00000575176 ASTN2O75129 1339 aaPredicted RBP10.91□□□□□ -0.66
SMG6-216ENST00000575176 UBTFL1P0CB47 393 aaPredicted RBP10.91□□□□□ -0.66
SMG6-216ENST00000575176 IL1R1P14778 569 aa10.91□□□□□ -0.66
SMG6-216ENST00000575176 FMR1Q06787 632 aaKnown RBP eCLIP10.91□□□□□ -0.66
SMG6-216ENST00000575176 CCDC57Q2TAC2 916 aa10.91□□□□□ -0.66
SMG6-216ENST00000575176 ZKSCAN2Q63HK3 967 aa10.91□□□□□ -0.66
SMG6-216ENST00000575176 RSBN1LQ6PCB5 846 aaPredicted RBP10.91□□□□□ -0.66
SMG6-216ENST00000575176 LDHAL6AQ6ZMR3 332 aa10.91□□□□□ -0.66
SMG6-216ENST00000575176 PODNQ7Z5L7 613 aa10.91□□□□□ -0.66
SMG6-216ENST00000575176 MICALL2Q8IY33 904 aa10.91□□□□□ -0.66
SMG6-216ENST00000575176 ZC3H12CQ9C0D7 883 aaKnown RBP10.91□□□□□ -0.66
SMG6-216ENST00000575176 TMX4Q9H1E5 349 aaPredicted RBP10.91□□□□□ -0.66
SMG6-216ENST00000575176 ADARB2Q9NS39 739 aaKnown RBP10.91□□□□□ -0.66
SMG6-216ENST00000575176 SSC5DA1L4H1 1573 aa10.9□□□□□ -0.66
SMG6-216ENST00000575176 AOX1Q06278 1338 aa10.9□□□□□ -0.66
SMG6-216ENST00000575176 MROH5Q6ZUA9 1318 aa10.9□□□□□ -0.66
SMG6-216ENST00000575176 PNMA6EA0A0J9YXQ4 647 aa10.9□□□□□ -0.66
SMG6-216ENST00000575176 RPS12P25398 132 aaKnown RBP10.9□□□□□ -0.66
SMG6-216ENST00000575176 TNIP1Q15025 636 aa10.9□□□□□ -0.66
SMG6-216ENST00000575176 MAP1SQ66K74 1059 aaPredicted RBP10.9□□□□□ -0.66
SMG6-216ENST00000575176 USP50Q70EL3 339 aaPredicted RBP10.9□□□□□ -0.66
SMG6-216ENST00000575176 FRAT1Q92837 279 aaPredicted RBP10.9□□□□□ -0.66
SMG6-216ENST00000575176 ZBED3Q96IU2 234 aaPredicted RBP10.9□□□□□ -0.66
SMG6-216ENST00000575176 COA1Q9GZY4 146 aa10.9□□□□□ -0.66
SMG6-216ENST00000575176 CD209Q9NNX6 404 aa10.9□□□□□ -0.66
SMG6-216ENST00000575176 COPRSQ9NQ92 184 aa10.9□□□□□ -0.66
SMG6-216ENST00000575176 PA2G4Q9UQ80 394 aaKnown RBP10.9□□□□□ -0.66
SMG6-216ENST00000575176 FOCADQ5VW36 1801 aa10.9□□□□□ -0.66
SMG6-216ENST00000575176 EYA2O00167 538 aa10.89□□□□□ -0.67
SMG6-216ENST00000575176 CIAO1O76071 339 aa10.89□□□□□ -0.67
SMG6-216ENST00000575176 APLP1P51693 650 aa10.89□□□□□ -0.67
SMG6-216ENST00000575176 UBE4AQ14139 1066 aa10.89□□□□□ -0.67
SMG6-216ENST00000575176 SAMD7Q7Z3H4 446 aa10.89□□□□□ -0.67
SMG6-216ENST00000575176 PNMA8AQ86V59 439 aaPredicted RBP10.89□□□□□ -0.67
SMG6-216ENST00000575176 PANK1Q8TE04 598 aa10.89□□□□□ -0.67
SMG6-216ENST00000575176 FAM84BQ96KN1 310 aaPredicted RBP10.89□□□□□ -0.67
SMG6-216ENST00000575176 CNOT7Q9UIV1 285 aaKnown RBP10.89□□□□□ -0.67
SMG6-216ENST00000575176 FAM205AQ6ZU69 1335 aa10.88□□□□□ -0.67
SMG6-216ENST00000575176 MYH2Q9UKX2 1941 aa10.88□□□□□ -0.67
SMG6-216ENST00000575176 USP17L3A6NCW0 530 aa10.88□□□□□ -0.67
SMG6-216ENST00000575176 USP17L4A6NCW7 530 aa10.88□□□□□ -0.67
SMG6-216ENST00000575176 ZBTB7BO15156 539 aaPredicted RBP10.88□□□□□ -0.67
SMG6-216ENST00000575176 PDE8BO95263 885 aa10.88□□□□□ -0.67
SMG6-216ENST00000575176 POLA2Q14181 598 aa10.88□□□□□ -0.67
SMG6-216ENST00000575176 EAPPQ56P03 285 aaPredicted RBP10.88□□□□□ -0.67
SMG6-216ENST00000575176 STRIP1Q5VSL9 837 aa10.88□□□□□ -0.67
SMG6-216ENST00000575176 DLK2Q6UY11 383 aa10.88□□□□□ -0.67
SMG6-216ENST00000575176 USP17L1Q7RTZ2 530 aa10.88□□□□□ -0.67
SMG6-216ENST00000575176 FBXO33Q7Z6M2 555 aa10.88□□□□□ -0.67
SMG6-216ENST00000575176 C16orf71Q8IYS4 520 aaPredicted RBP10.88□□□□□ -0.67
SMG6-216ENST00000575176 AGBL3Q8NEM8 1001 aa10.88□□□□□ -0.67
SMG6-216ENST00000575176 TDRD7Q8NHU6 1098 aaKnown RBP10.88□□□□□ -0.67
SMG6-216ENST00000575176 CNNM1Q9NRU3 951 aa10.88□□□□□ -0.67
SMG6-216ENST00000575176 SIPA1L1O43166 1804 aa10.87□□□□□ -0.67
SMG6-216ENST00000575176 TRAF5O00463 557 aa10.87□□□□□ -0.67
SMG6-216ENST00000575176 ZBTB22O15209 634 aa10.87□□□□□ -0.67
SMG6-216ENST00000575176 IPO8O15397 1037 aaKnown RBP10.87□□□□□ -0.67
SMG6-216ENST00000575176 GNAI3P08754 354 aa10.87□□□□□ -0.67
SMG6-216ENST00000575176 LMOD1P29536 600 aaPredicted RBP10.87□□□□□ -0.67
SMG6-216ENST00000575176 GYG1P46976 350 aa10.87□□□□□ -0.67
SMG6-216ENST00000575176 GRIK5Q16478 980 aa10.87□□□□□ -0.67
SMG6-216ENST00000575176 TBC1D10BQ4KMP7 808 aaPredicted RBP10.87□□□□□ -0.67
SMG6-216ENST00000575176 C20orf194Q5TEA3 1177 aa10.87□□□□□ -0.67
SMG6-216ENST00000575176 DZIP1LQ8IYY4 767 aaKnown RBP10.87□□□□□ -0.67
SMG6-216ENST00000575176 C1orf115Q9H7X2 142 aa10.87□□□□□ -0.67
SMG6-216ENST00000575176 FBXO3Q9UK99 471 aa10.87□□□□□ -0.67
SMG6-216ENST00000575176 PCDHAC2Q9Y5I4 1007 aa10.87□□□□□ -0.67
SMG6-216ENST00000575176 DDX60LQ5H9U9 1706 aaKnown RBP10.87□□□□□ -0.67
SMG6-216ENST00000575176 PLIN1O60240 522 aa10.86□□□□□ -0.67
SMG6-216ENST00000575176 KIF4BQ2VIQ3 1234 aa10.86□□□□□ -0.67
SMG6-216ENST00000575176 CST9Q5W186 159 aa10.86□□□□□ -0.67
SMG6-216ENST00000575176 CNTROBQ8N137 903 aa10.86□□□□□ -0.67
SMG6-216ENST00000575176 SSH3Q8TE77 659 aa10.86□□□□□ -0.67
SMG6-216ENST00000575176 ZC3H15Q8WU90 426 aaKnown RBP10.86□□□□□ -0.67
SMG6-216ENST00000575176 GLIS2Q9BZE0 524 aaPredicted RBP10.86□□□□□ -0.67
SMG6-216ENST00000575176 RCAN3Q9UKA8 241 aa10.86□□□□□ -0.67
SMG6-216ENST00000575176 CNTNAP1P78357 1384 aa10.86□□□□□ -0.67
SMG6-216ENST00000575176 MYO3BQ8WXR4 1341 aa10.85□□□□□ -0.67
SMG6-216ENST00000575176 SRGAP3O43295 1099 aa10.85□□□□□ -0.67
SMG6-216ENST00000575176 GNAI2P04899 355 aa10.85□□□□□ -0.67
SMG6-216ENST00000575176 FKBP1AP62942 108 aaKnown RBP10.85□□□□□ -0.67
SMG6-216ENST00000575176 GTF2IP78347 998 aa10.85□□□□□ -0.67
SMG6-216ENST00000575176 PUM3Q15397 648 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms