RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 TTLL5Q6EMB2 1281 aa28.15■■■□□ 2.1
NPLOC4-217ENST00000574897 HELBQ8NG08 1087 aaPredicted RBP28.15■■■□□ 2.1
NPLOC4-217ENST00000574897 MCAMP43121 646 aa28.14■■■□□ 2.1
NPLOC4-217ENST00000574897 RREB1Q92766 1687 aa28.14■■■□□ 2.1
NPLOC4-217ENST00000574897 DDX60Q8IY21 1712 aaKnown RBP28.13■■■□□ 2.09
NPLOC4-217ENST00000574897 WASHC4Q2M389 1173 aa28.13■■■□□ 2.09
NPLOC4-217ENST00000574897 FOXP2O15409 715 aa28.12■■■□□ 2.09
NPLOC4-217ENST00000574897 FIBPO43427 364 aa28.12■■■□□ 2.09
NPLOC4-217ENST00000574897 LARP1BQ659C4 914 aaKnown RBP28.12■■■□□ 2.09
NPLOC4-217ENST00000574897 CAMTA2O94983 1202 aa28.11■■■□□ 2.09
NPLOC4-217ENST00000574897 DNM1Q05193 864 aaKnown RBP28.11■■■□□ 2.09
NPLOC4-217ENST00000574897 FAM98CQ17RN3 349 aaKnown RBP28.11■■■□□ 2.09
NPLOC4-217ENST00000574897 CDC37L1Q7L3B6 337 aa28.11■■■□□ 2.09
NPLOC4-217ENST00000574897 BRF1Q92994 677 aa28.11■■■□□ 2.09
NPLOC4-217ENST00000574897 RBSNQ9H1K0 784 aa28.11■■■□□ 2.09
NPLOC4-217ENST00000574897 SNAP23O00161 211 aa28.11■■■□□ 2.09
NPLOC4-217ENST00000574897 JAK2O60674 1132 aa28.1■■■□□ 2.09
NPLOC4-217ENST00000574897 PDE8BO95263 885 aa28.1■■■□□ 2.09
NPLOC4-217ENST00000574897 NASPP49321 788 aaPredicted RBP28.1■■■□□ 2.09
NPLOC4-217ENST00000574897 KCNQ4P56696 695 aa28.1■■■□□ 2.09
NPLOC4-217ENST00000574897 BARGINQ6ZT62 677 aa28.1■■■□□ 2.09
NPLOC4-217ENST00000574897 FERMT3Q86UX7 667 aa28.1■■■□□ 2.09
NPLOC4-217ENST00000574897 PUS7LQ9H0K6 701 aaKnown RBP28.1■■■□□ 2.09
NPLOC4-217ENST00000574897 HSP90B1P14625 803 aaKnown RBP28.1■■■□□ 2.09
NPLOC4-217ENST00000574897 SEC31BQ9NQW1 1179 aa28.1■■■□□ 2.09
NPLOC4-217ENST00000574897 LRP5O75197 1615 aa28.1■■■□□ 2.09
NPLOC4-217ENST00000574897 E7EWF7 191 aa28.09■■■□□ 2.09
NPLOC4-217ENST00000574897 TMEM87AQ8NBN3 555 aa28.09■■■□□ 2.09
NPLOC4-217ENST00000574897 COL5A3P25940 1745 aaPredicted RBP28.09■■■□□ 2.09
NPLOC4-217ENST00000574897 CHST3Q7LGC8 479 aa28.09■■■□□ 2.09
NPLOC4-217ENST00000574897 GTF3C6Q969F1 213 aa28.09■■■□□ 2.09
NPLOC4-217ENST00000574897 PHKA1P46020 1223 aa28.08■■■□□ 2.09
NPLOC4-217ENST00000574897 FAM173BQ6P4H8 233 aa28.08■■■□□ 2.09
NPLOC4-217ENST00000574897 HAND2P61296 217 aa28.07■■■□□ 2.08
NPLOC4-217ENST00000574897 TICAM2Q86XR7 235 aa28.07■■■□□ 2.08
NPLOC4-217ENST00000574897 FGD1P98174 961 aa28.07■■■□□ 2.08
NPLOC4-217ENST00000574897 DHX32Q7L7V1 743 aaKnown RBP28.07■■■□□ 2.08
NPLOC4-217ENST00000574897 UTP14AQ9BVJ6 771 aaKnown RBP28.07■■■□□ 2.08
NPLOC4-217ENST00000574897 CICQ96RK0 1608 aaPredicted RBP28.06■■■□□ 2.08
NPLOC4-217ENST00000574897 TOM1O60784 492 aa28.06■■■□□ 2.08
NPLOC4-217ENST00000574897 LRSAM1Q6UWE0 723 aa28.06■■■□□ 2.08
NPLOC4-217ENST00000574897 PTF1AQ7RTS3 328 aa28.06■■■□□ 2.08
NPLOC4-217ENST00000574897 C8orf37Q96NL8 207 aa28.06■■■□□ 2.08
NPLOC4-217ENST00000574897 NIP7Q9Y221 180 aaKnown RBP eCLIP28.06■■■□□ 2.08
NPLOC4-217ENST00000574897 COL4A1P02462 1669 aa28.06■■■□□ 2.08
NPLOC4-217ENST00000574897 APOBRQ0VD83 1088 aa28.06■■■□□ 2.08
NPLOC4-217ENST00000574897 CCDC102BQ68D86 513 aa28.06■■■□□ 2.08
NPLOC4-217ENST00000574897 SMIM5Q71RC9 77 aa28.06■■■□□ 2.08
NPLOC4-217ENST00000574897 TAF1P21675 1872 aa28.05■■■□□ 2.08
NPLOC4-217ENST00000574897 ARAP2Q8WZ64 1704 aa28.05■■■□□ 2.08
NPLOC4-217ENST00000574897 SCRN1Q12765 414 aa28.05■■■□□ 2.08
NPLOC4-217ENST00000574897 APPBP2Q92624 585 aa28.05■■■□□ 2.08
NPLOC4-217ENST00000574897 PIH1D3Q9NQM4 214 aaKnown RBP28.05■■■□□ 2.08
NPLOC4-217ENST00000574897 ATP6V1DQ9Y5K8 247 aa28.05■■■□□ 2.08
NPLOC4-217ENST00000574897 ABCC12Q96J65 1359 aa28.05■■■□□ 2.08
NPLOC4-217ENST00000574897 ZFYP08048 801 aaPredicted RBP28.04■■■□□ 2.08
NPLOC4-217ENST00000574897 EXOSC10Q01780 885 aaKnown RBP28.04■■■□□ 2.08
NPLOC4-217ENST00000574897 RRAGDQ9NQL2 400 aaPredicted RBP28.04■■■□□ 2.08
NPLOC4-217ENST00000574897 DDX11Q96FC9 970 aa28.03■■■□□ 2.08
NPLOC4-217ENST00000574897 NTSR2O95665 410 aa28.03■■■□□ 2.08
NPLOC4-217ENST00000574897 FAM43AQ8N2R8 423 aa28.03■■■□□ 2.08
NPLOC4-217ENST00000574897 BCORQ6W2J9 1755 aa28.03■■■□□ 2.08
NPLOC4-217ENST00000574897 FGAP02671 866 aa28.02■■■□□ 2.08
NPLOC4-217ENST00000574897 LRRFIP1Q32MZ4 808 aaKnown RBP28.02■■■□□ 2.08
NPLOC4-217ENST00000574897 CASZ1Q86V15 1759 aa28.02■■■□□ 2.08
NPLOC4-217ENST00000574897 LAMB2P55268 1798 aa28.02■■■□□ 2.08
NPLOC4-217ENST00000574897 GPAA1O43292 621 aa28.02■■■□□ 2.08
NPLOC4-217ENST00000574897 HMGB1P09429 215 aaKnown RBP28.02■■■□□ 2.08
NPLOC4-217ENST00000574897 FGFR2P21802 821 aa28.02■■■□□ 2.08
NPLOC4-217ENST00000574897 LINC00116Q8NCU8 138 aa28.02■■■□□ 2.08
NPLOC4-217ENST00000574897 PUM3Q15397 648 aaKnown RBP28.01■■■□□ 2.07
NPLOC4-217ENST00000574897 NGLY1Q96IV0 654 aa28.01■■■□□ 2.07
NPLOC4-217ENST00000574897 GPHNQ9NQX3 736 aaPredicted RBP28.01■■■□□ 2.07
NPLOC4-217ENST00000574897 PPFIA3O75145 1194 aa28.01■■■□□ 2.07
NPLOC4-217ENST00000574897 IDH1O75874 414 aaKnown RBP28.01■■■□□ 2.07
NPLOC4-217ENST00000574897 SLC9C2Q5TAH2 1124 aa28.01■■■□□ 2.07
NPLOC4-217ENST00000574897 PDCP20941 246 aa28■■■□□ 2.07
NPLOC4-217ENST00000574897 ADD2P35612 726 aa28■■■□□ 2.07
NPLOC4-217ENST00000574897 BCL9LQ86UU0 1499 aa28■■■□□ 2.07
NPLOC4-217ENST00000574897 MROH5Q6ZUA9 1318 aa28■■■□□ 2.07
NPLOC4-217ENST00000574897 UBE2HP62256 183 aa28■■■□□ 2.07
NPLOC4-217ENST00000574897 CCT2P78371 535 aaKnown RBP28■■■□□ 2.07
NPLOC4-217ENST00000574897 LPIN2Q92539 896 aa28■■■□□ 2.07
NPLOC4-217ENST00000574897 ZNF512BQ96KM6 892 aaPredicted RBP28■■■□□ 2.07
NPLOC4-217ENST00000574897 MPHOSPH8Q99549 860 aa28■■■□□ 2.07
NPLOC4-217ENST00000574897 ARID4AP29374 1257 aaPredicted RBP27.99■■■□□ 2.07
NPLOC4-217ENST00000574897 PARP10Q53GL7 1025 aa27.99■■■□□ 2.07
NPLOC4-217ENST00000574897 AK7Q96M32 723 aa27.99■■■□□ 2.07
NPLOC4-217ENST00000574897 NCOA5Q9HCD5 579 aaKnown RBP27.99■■■□□ 2.07
NPLOC4-217ENST00000574897 NAP1L2Q9ULW6 460 aaPredicted RBP27.99■■■□□ 2.07
NPLOC4-217ENST00000574897 SMARCC1Q92922 1105 aaPredicted RBP27.99■■■□□ 2.07
NPLOC4-217ENST00000574897 AGXT2Q9BYV1 514 aa27.99■■■□□ 2.07
NPLOC4-217ENST00000574897 WWC3Q9ULE0 1092 aa27.99■■■□□ 2.07
NPLOC4-217ENST00000574897 PFKFB2O60825 505 aa27.98■■■□□ 2.07
NPLOC4-217ENST00000574897 RNF214Q8ND24 703 aa27.98■■■□□ 2.07
NPLOC4-217ENST00000574897 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.98■■■□□ 2.071e-8■■■■□ 21.1
NPLOC4-217ENST00000574897 UBAP1LF5GYI3 381 aa27.97■■■□□ 2.07
NPLOC4-217ENST00000574897 CTDNEP1O95476 244 aa27.97■■■□□ 2.07
NPLOC4-217ENST00000574897 SYAP1Q96A49 352 aaPredicted RBP27.97■■■□□ 2.07
NPLOC4-217ENST00000574897 FOSBP53539 338 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms