RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 LRP5O75197 1615 aa16.71■□□□□ 0.26
VPS33B-208ENST00000574755 AKAP11Q9UKA4 1901 aa16.7■□□□□ 0.26
VPS33B-208ENST00000574755 MBD3O95983 291 aa16.7■□□□□ 0.26
VPS33B-208ENST00000574755 MCAMP43121 646 aa16.7■□□□□ 0.26
VPS33B-208ENST00000574755 ZSCAN23Q3MJ62 389 aa16.7■□□□□ 0.26
VPS33B-208ENST00000574755 MROH5Q6ZUA9 1318 aa16.7■□□□□ 0.26
VPS33B-208ENST00000574755 DDX60Q8IY21 1712 aaKnown RBP16.7■□□□□ 0.26
VPS33B-208ENST00000574755 F13A1P00488 732 aa16.7■□□□□ 0.26
VPS33B-208ENST00000574755 HMGB1P09429 215 aaKnown RBP16.7■□□□□ 0.26
VPS33B-208ENST00000574755 STK3Q13188 491 aa16.7■□□□□ 0.26
VPS33B-208ENST00000574755 Q6ZUG5 572 aa16.7■□□□□ 0.26
VPS33B-208ENST00000574755 STOX1Q6ZVD7 989 aa16.7■□□□□ 0.26
VPS33B-208ENST00000574755 GDPD2Q9HCC8 539 aa16.7■□□□□ 0.26
VPS33B-208ENST00000574755 ZNF652Q9Y2D9 606 aa16.7■□□□□ 0.26
VPS33B-208ENST00000574755 ATP6V1DQ9Y5K8 247 aa16.7■□□□□ 0.26
VPS33B-208ENST00000574755 FGD1P98174 961 aa16.69■□□□□ 0.26
VPS33B-208ENST00000574755 PUM3Q15397 648 aaKnown RBP16.69■□□□□ 0.26
VPS33B-208ENST00000574755 MPHOSPH8Q99549 860 aa16.69■□□□□ 0.26
VPS33B-208ENST00000574755 HELBQ8NG08 1087 aaPredicted RBP16.69■□□□□ 0.26
VPS33B-208ENST00000574755 ZNF512BQ96KM6 892 aaPredicted RBP16.69■□□□□ 0.26
VPS33B-208ENST00000574755 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.69■□□□□ 0.261e-6■■■■■ 32.4
VPS33B-208ENST00000574755 ZNF831Q5JPB2 1677 aa16.68■□□□□ 0.26
VPS33B-208ENST00000574755 BCORQ6W2J9 1755 aa16.68■□□□□ 0.26
VPS33B-208ENST00000574755 VPS37CA5D8V6 355 aaPredicted RBP16.68■□□□□ 0.26
VPS33B-208ENST00000574755 NTSR2O95665 410 aa16.68■□□□□ 0.26
VPS33B-208ENST00000574755 HSP90B1P14625 803 aaKnown RBP16.68■□□□□ 0.26
VPS33B-208ENST00000574755 CCDC152Q4G0S7 254 aa16.68■□□□□ 0.26
VPS33B-208ENST00000574755 LPIN2Q92539 896 aa16.68■□□□□ 0.26
VPS33B-208ENST00000574755 APPBP2Q92624 585 aa16.68■□□□□ 0.26
VPS33B-208ENST00000574755 RBM27Q9P2N5 1060 aaKnown RBP16.68■□□□□ 0.26
VPS33B-208ENST00000574755 NSFL1CQ9UNZ2 370 aaKnown RBP16.68■□□□□ 0.26
VPS33B-208ENST00000574755 MTMR6Q9Y217 621 aa16.68■□□□□ 0.26
VPS33B-208ENST00000574755 ZNF445P59923 1031 aa16.67■□□□□ 0.26
VPS33B-208ENST00000574755 CCDC102BQ68D86 513 aa16.67■□□□□ 0.26
VPS33B-208ENST00000574755 SEC31BQ9NQW1 1179 aa16.67■□□□□ 0.26
VPS33B-208ENST00000574755 LAMB2P55268 1798 aa16.67■□□□□ 0.26
VPS33B-208ENST00000574755 ARAP2Q8WZ64 1704 aa16.67■□□□□ 0.26
VPS33B-208ENST00000574755 TTF1Q15361 905 aaPredicted RBP16.67■□□□□ 0.26
VPS33B-208ENST00000574755 LARP1BQ659C4 914 aaKnown RBP16.67■□□□□ 0.26
VPS33B-208ENST00000574755 DHX32Q7L7V1 743 aaKnown RBP16.67■□□□□ 0.26
VPS33B-208ENST00000574755 USP48Q86UV5 1035 aa16.67■□□□□ 0.26
VPS33B-208ENST00000574755 LINC00116Q8NCU8 138 aa16.67■□□□□ 0.26
VPS33B-208ENST00000574755 LRRC2Q9BYS8 371 aa16.67■□□□□ 0.26
VPS33B-208ENST00000574755 A0A0G2JLW4 131 aa16.66■□□□□ 0.26
VPS33B-208ENST00000574755 E7EWF7 191 aa16.66■□□□□ 0.26
VPS33B-208ENST00000574755 PHKA1P46020 1223 aa16.66■□□□□ 0.26
VPS33B-208ENST00000574755 KCNQ4P56696 695 aa16.66■□□□□ 0.26
VPS33B-208ENST00000574755 BRF1Q92994 677 aa16.66■□□□□ 0.26
VPS33B-208ENST00000574755 PUS7LQ9H0K6 701 aaKnown RBP16.66■□□□□ 0.26
VPS33B-208ENST00000574755 TMEM63CQ9P1W3 806 aa16.66■□□□□ 0.26
VPS33B-208ENST00000574755 CNPY2Q9Y2B0 182 aa16.66■□□□□ 0.26
VPS33B-208ENST00000574755 PDIA4P13667 645 aaKnown RBP16.66■□□□□ 0.26
VPS33B-208ENST00000574755 PDCP20941 246 aa16.66■□□□□ 0.26
VPS33B-208ENST00000574755 ZSCAN25Q6NSZ9 544 aa16.66■□□□□ 0.26
VPS33B-208ENST00000574755 MYO5AQ9Y4I1 1855 aaKnown RBP16.66■□□□□ 0.26
VPS33B-208ENST00000574755 UQCRFS1P1P0C7P4 283 aa16.65■□□□□ 0.26
VPS33B-208ENST00000574755 SLC5A1P13866 664 aa16.65■□□□□ 0.26
VPS33B-208ENST00000574755 FGFR2P21802 821 aa16.65■□□□□ 0.26
VPS33B-208ENST00000574755 ARID4AP29374 1257 aaPredicted RBP16.65■□□□□ 0.26
VPS33B-208ENST00000574755 TTLL5Q6EMB2 1281 aa16.65■□□□□ 0.26
VPS33B-208ENST00000574755 FNBP4Q8N3X1 1017 aaPredicted RBP16.65■□□□□ 0.26
VPS33B-208ENST00000574755 GTF3C6Q969F1 213 aa16.65■□□□□ 0.26
VPS33B-208ENST00000574755 CTNNA3Q9UI47 895 aa16.65■□□□□ 0.26
VPS33B-208ENST00000574755 IGHMBP2P38935 993 aaKnown RBP16.65■□□□□ 0.26
VPS33B-208ENST00000574755 SLC9C2Q5TAH2 1124 aa16.65■□□□□ 0.26
VPS33B-208ENST00000574755 CLEC4GQ6UXB4 293 aa16.65■□□□□ 0.26
VPS33B-208ENST00000574755 USP21Q9UK80 565 aa16.65■□□□□ 0.26
VPS33B-208ENST00000574755 GPAA1O43292 621 aa16.64■□□□□ 0.25
VPS33B-208ENST00000574755 GADD45BO75293 160 aaPredicted RBP16.64■□□□□ 0.25
VPS33B-208ENST00000574755 IDH1O75874 414 aaKnown RBP16.64■□□□□ 0.25
VPS33B-208ENST00000574755 IMMTQ16891 758 aaKnown RBP16.64■□□□□ 0.25
VPS33B-208ENST00000574755 TMEM87AQ8NBN3 555 aa16.64■□□□□ 0.25
VPS33B-208ENST00000574755 FOXP2O15409 715 aa16.64■□□□□ 0.25
VPS33B-208ENST00000574755 ADD2P35612 726 aa16.64■□□□□ 0.25
VPS33B-208ENST00000574755 RTL9Q8NET4 1388 aa16.63■□□□□ 0.25
VPS33B-208ENST00000574755 FIBPO43427 364 aa16.63■□□□□ 0.25
VPS33B-208ENST00000574755 PTF1AQ7RTS3 328 aa16.63■□□□□ 0.25
VPS33B-208ENST00000574755 PIH1D3Q9NQM4 214 aaKnown RBP16.63■□□□□ 0.25
VPS33B-208ENST00000574755 SNAP23O00161 211 aa16.63■□□□□ 0.25
VPS33B-208ENST00000574755 FGAP02671 866 aa16.63■□□□□ 0.25
VPS33B-208ENST00000574755 HAND2P61296 217 aa16.63■□□□□ 0.25
VPS33B-208ENST00000574755 EXOSC10Q01780 885 aaKnown RBP16.63■□□□□ 0.25
VPS33B-208ENST00000574755 CDC37L1Q7L3B6 337 aa16.63■□□□□ 0.25
VPS33B-208ENST00000574755 CNTNAP4Q9C0A0 1308 aa16.62■□□□□ 0.25
VPS33B-208ENST00000574755 BTAF1O14981 1849 aa16.62■□□□□ 0.25
VPS33B-208ENST00000574755 DNM1Q05193 864 aaKnown RBP16.62■□□□□ 0.25
VPS33B-208ENST00000574755 SYAP1Q96A49 352 aaPredicted RBP16.62■□□□□ 0.25
VPS33B-208ENST00000574755 SYCE3A1L190 88 aa16.62■□□□□ 0.25
VPS33B-208ENST00000574755 APOBRQ0VD83 1088 aa16.62■□□□□ 0.25
VPS33B-208ENST00000574755 CHST3Q7LGC8 479 aa16.62■□□□□ 0.25
VPS33B-208ENST00000574755 SPATA5Q8NB90 893 aa16.62■□□□□ 0.25
VPS33B-208ENST00000574755 SPATA31A6Q5VVP1 1343 aa16.61■□□□□ 0.25
VPS33B-208ENST00000574755 JAK2O60674 1132 aa16.61■□□□□ 0.25
VPS33B-208ENST00000574755 ATRNO75882 1429 aa16.61■□□□□ 0.25
VPS33B-208ENST00000574755 SCRN1Q12765 414 aa16.61■□□□□ 0.25
VPS33B-208ENST00000574755 CSPP1Q1MSJ5 1256 aa16.61■□□□□ 0.25
VPS33B-208ENST00000574755 FERMT3Q86UX7 667 aa16.61■□□□□ 0.25
VPS33B-208ENST00000574755 AGXT2Q9BYV1 514 aa16.61■□□□□ 0.25
VPS33B-208ENST00000574755 NASPP49321 788 aaPredicted RBP16.6■□□□□ 0.25
VPS33B-208ENST00000574755 UBE3CQ15386 1083 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms