RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 NBPF9Q3BBW0 867 aa15.44■□□□□ 0.06
CTNS-208ENST00000574218 PRAMEF18Q5VWM3 479 aa15.44■□□□□ 0.06
CTNS-208ENST00000574218 DUSP27Q5VZP5 1158 aa15.44■□□□□ 0.06
CTNS-208ENST00000574218 CCDC191Q8NCU4 936 aa15.44■□□□□ 0.06
CTNS-208ENST00000574218 CWC25Q9NXE8 425 aaPredicted RBP15.44■□□□□ 0.06
CTNS-208ENST00000574218 ECM29Q5VYK3 1845 aa15.44■□□□□ 0.06
CTNS-208ENST00000574218 PCCAP05165 728 aaPredicted RBP15.43■□□□□ 0.06
CTNS-208ENST00000574218 WDR43Q15061 677 aaKnown RBP eCLIP15.43■□□□□ 0.06
CTNS-208ENST00000574218 APOBEC3FQ8IUX4 373 aaKnown RBP15.43■□□□□ 0.06
CTNS-208ENST00000574218 MED23Q9ULK4 1368 aa15.43■□□□□ 0.06
CTNS-208ENST00000574218 RBBP6Q7Z6E9 1792 aaKnown RBP15.43■□□□□ 0.06
CTNS-208ENST00000574218 ZNF646O15015 1829 aaPredicted RBP15.43■□□□□ 0.06
CTNS-208ENST00000574218 DDX58O95786 925 aaKnown RBP15.42■□□□□ 0.06
CTNS-208ENST00000574218 MMP14P50281 582 aa15.42■□□□□ 0.06
CTNS-208ENST00000574218 PRKG1Q13976 671 aa15.42■□□□□ 0.06
CTNS-208ENST00000574218 RALBP1Q15311 655 aa15.42■□□□□ 0.06
CTNS-208ENST00000574218 RUNDC1Q96C34 613 aa15.42■□□□□ 0.06
CTNS-208ENST00000574218 WNT10BO00744 389 aa15.41■□□□□ 0.06
CTNS-208ENST00000574218 INTS3Q68E01 1043 aaKnown RBP15.41■□□□□ 0.06
CTNS-208ENST00000574218 CFHR5Q9BXR6 569 aa15.41■□□□□ 0.06
CTNS-208ENST00000574218 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.41■□□□□ 0.06
CTNS-208ENST00000574218 ANGEL1Q9UNK9 670 aaKnown RBP15.41■□□□□ 0.06
CTNS-208ENST00000574218 TRIM17Q9Y577 477 aa15.41■□□□□ 0.06
CTNS-208ENST00000574218 SASH1O94885 1247 aa15.4■□□□□ 0.06
CTNS-208ENST00000574218 INHBEP58166 350 aa15.4■□□□□ 0.06
CTNS-208ENST00000574218 PTPN12Q05209 780 aaKnown RBP15.4■□□□□ 0.06
CTNS-208ENST00000574218 DACT2Q5SW24 774 aa15.4■□□□□ 0.06
CTNS-208ENST00000574218 STRIP1Q5VSL9 837 aa15.4■□□□□ 0.06
CTNS-208ENST00000574218 JARID2Q92833 1246 aaPredicted RBP15.4■□□□□ 0.06
CTNS-208ENST00000574218 CHMP4AQ9BY43 222 aa15.4■□□□□ 0.06
CTNS-208ENST00000574218 TRIM35Q9UPQ4 493 aa15.4■□□□□ 0.06
CTNS-208ENST00000574218 LAMB1P07942 1786 aa15.39■□□□□ 0.05
CTNS-208ENST00000574218 MANSC4A6NHS7 340 aaPredicted RBP15.39■□□□□ 0.05
CTNS-208ENST00000574218 MXD3Q9BW11 206 aa15.39■□□□□ 0.05
CTNS-208ENST00000574218 COA1Q9GZY4 146 aa15.39■□□□□ 0.05
CTNS-208ENST00000574218 PHAXQ9H814 394 aaKnown RBP15.39■□□□□ 0.05
CTNS-208ENST00000574218 COL1A1P02452 1464 aaPredicted RBP15.39■□□□□ 0.05
CTNS-208ENST00000574218 KIAA0100Q14667 2235 aaKnown RBP15.39■□□□□ 0.05
CTNS-208ENST00000574218 CCT4P50991 539 aaKnown RBP15.38■□□□□ 0.05
CTNS-208ENST00000574218 CTSWP56202 376 aa15.38■□□□□ 0.05
CTNS-208ENST00000574218 HABP4Q5JVS0 413 aaKnown RBP15.38■□□□□ 0.05
CTNS-208ENST00000574218 SPRYD7Q5W111 196 aa15.38■□□□□ 0.05
CTNS-208ENST00000574218 SLC10A4Q96EP9 437 aa15.38■□□□□ 0.05
CTNS-208ENST00000574218 ERO1AQ96HE7 468 aa15.38■□□□□ 0.05
CTNS-208ENST00000574218 PPP1R12BO60237 982 aaPredicted RBP15.37■□□□□ 0.05
CTNS-208ENST00000574218 IGHMBP2P38935 993 aaKnown RBP15.37■□□□□ 0.05
CTNS-208ENST00000574218 CALD1Q05682 793 aaKnown RBP15.37■□□□□ 0.05
CTNS-208ENST00000574218 TTLL5Q6EMB2 1281 aa15.37■□□□□ 0.05
CTNS-208ENST00000574218 OTUD7BQ6GQQ9 843 aa15.37■□□□□ 0.05
CTNS-208ENST00000574218 METTL22Q9BUU2 404 aaPredicted RBP15.37■□□□□ 0.05
CTNS-208ENST00000574218 MBIPQ9NS73 344 aa15.37■□□□□ 0.05
CTNS-208ENST00000574218 BSDC1Q9NW68 430 aaPredicted RBP15.37■□□□□ 0.05
CTNS-208ENST00000574218 LEMD3Q9Y2U8 911 aa15.37■□□□□ 0.05
CTNS-208ENST00000574218 ELL2O00472 640 aaPredicted RBP15.36■□□□□ 0.05
CTNS-208ENST00000574218 KCNJ4P48050 445 aa15.36■□□□□ 0.05
CTNS-208ENST00000574218 NEXNQ0ZGT2 675 aa15.36■□□□□ 0.05
CTNS-208ENST00000574218 OTOP1Q7RTM1 612 aa15.36■□□□□ 0.05
CTNS-208ENST00000574218 IFNL1Q8IU54 200 aa15.36■□□□□ 0.05
CTNS-208ENST00000574218 KIAA0825Q8IV33 1275 aa15.36■□□□□ 0.05
CTNS-208ENST00000574218 R3HDMLQ9H3Y0 253 aa15.36■□□□□ 0.05
CTNS-208ENST00000574218 MINPP1Q9UNW1 487 aa15.36■□□□□ 0.05
CTNS-208ENST00000574218 ZBTB48P10074 688 aaPredicted RBP15.35■□□□□ 0.05
CTNS-208ENST00000574218 GNAI1P63096 354 aa15.35■□□□□ 0.05
CTNS-208ENST00000574218 DLGAP5Q15398 846 aa15.35■□□□□ 0.05
CTNS-208ENST00000574218 LDLRAD1Q5T700 205 aa15.35■□□□□ 0.05
CTNS-208ENST00000574218 ANKRD2Q9GZV1 360 aa15.35■□□□□ 0.05
CTNS-208ENST00000574218 MYBBP1AQ9BQG0 1328 aaKnown RBP15.35■□□□□ 0.05
CTNS-208ENST00000574218 POTEFA5A3E0 1075 aa15.34■□□□□ 0.05
CTNS-208ENST00000574218 MYO1BO43795 1136 aa15.34■□□□□ 0.05
CTNS-208ENST00000574218 GTF2IP78347 998 aa15.34■□□□□ 0.05
CTNS-208ENST00000574218 CCDC30Q5VVM6 783 aa15.34■□□□□ 0.05
CTNS-208ENST00000574218 WNK4Q96J92 1243 aa15.34■□□□□ 0.05
CTNS-208ENST00000574218 DEFB129Q9H1M3 183 aa15.34■□□□□ 0.05
CTNS-208ENST00000574218 GREM2Q9H772 168 aa15.34■□□□□ 0.05
CTNS-208ENST00000574218 MAP3K2Q9Y2U5 619 aa15.34■□□□□ 0.05
CTNS-208ENST00000574218 ZNF804BA4D1E1 1349 aa15.34■□□□□ 0.05
CTNS-208ENST00000574218 IREB2P48200 963 aaKnown RBP15.33■□□□□ 0.04
CTNS-208ENST00000574218 SUPT20HL1Q3ZLR7 823 aa15.33■□□□□ 0.04
CTNS-208ENST00000574218 TTLL11Q8NHH1 800 aa15.33■□□□□ 0.04
CTNS-208ENST00000574218 MPHOSPH8Q99549 860 aa15.33■□□□□ 0.04
CTNS-208ENST00000574218 TMEM106CQ9BVX2 250 aa15.33■□□□□ 0.04
CTNS-208ENST00000574218 EFCC1Q9HA90 598 aa15.33■□□□□ 0.04
CTNS-208ENST00000574218 IFT57Q9NWB7 429 aa15.33■□□□□ 0.04
CTNS-208ENST00000574218 PPP2R3BQ9Y5P8 575 aa15.33■□□□□ 0.04
CTNS-208ENST00000574218 WTIPA6NIX2 430 aaPredicted RBP15.32■□□□□ 0.04
CTNS-208ENST00000574218 ARHGEF6Q15052 776 aa15.32■□□□□ 0.04
CTNS-208ENST00000574218 CD99L2Q8TCZ2 262 aa15.32■□□□□ 0.04
CTNS-208ENST00000574218 PTPN22Q9Y2R2 807 aa15.32■□□□□ 0.04
CTNS-208ENST00000574218 UNCXA6NJT0 531 aa15.31■□□□□ 0.04
CTNS-208ENST00000574218 MAP3K11Q16584 847 aa15.31■□□□□ 0.04
CTNS-208ENST00000574218 KSR2Q6VAB6 950 aa15.31■□□□□ 0.04
CTNS-208ENST00000574218 STK31Q9BXU1 1019 aa15.31■□□□□ 0.04
CTNS-208ENST00000574218 VEZTQ9HBM0 779 aa15.31■□□□□ 0.04
CTNS-208ENST00000574218 FZD1Q9UP38 647 aa15.31■□□□□ 0.04
CTNS-208ENST00000574218 OTOFQ9HC10 1997 aa15.31■□□□□ 0.04
CTNS-208ENST00000574218 A0A1B0GUL6 1792 aa15.3■□□□□ 0.04
CTNS-208ENST00000574218 IGF2BP3O00425 579 aaKnown RBP eCLIP15.3■□□□□ 0.04
CTNS-208ENST00000574218 SP3Q02447 781 aa15.3■□□□□ 0.04
CTNS-208ENST00000574218 TXNRD3Q86VQ6 643 aa15.3■□□□□ 0.04
CTNS-208ENST00000574218 CLMNQ96JQ2 1002 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms