RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 ZBTB47Q9UFB7 747 aaPredicted RBP16.71■□□□□ 0.27
NDE1-209ENST00000574109 SCN9AQ15858 1988 aa16.71■□□□□ 0.27
NDE1-209ENST00000574109 TAF5LO75529 589 aa16.7■□□□□ 0.26
NDE1-209ENST00000574109 TFCP2Q12800 502 aa16.7■□□□□ 0.26
NDE1-209ENST00000574109 CAVIN4Q5BKX8 364 aa16.7■□□□□ 0.26
NDE1-209ENST00000574109 NIM1KQ8IY84 436 aa16.7■□□□□ 0.26
NDE1-209ENST00000574109 CLASRPQ8N2M8 674 aaKnown RBP16.7■□□□□ 0.26
NDE1-209ENST00000574109 LARGE2Q8N3Y3 721 aa16.7■□□□□ 0.26
NDE1-209ENST00000574109 HELBQ8NG08 1087 aaPredicted RBP16.7■□□□□ 0.26
NDE1-209ENST00000574109 RHPN1Q8TCX5 695 aa16.7■□□□□ 0.26
NDE1-209ENST00000574109 ZNF277Q9NRM2 450 aaPredicted RBP16.7■□□□□ 0.26
NDE1-209ENST00000574109 ZBTB22O15209 634 aa16.69■□□□□ 0.26
NDE1-209ENST00000574109 SASH1O94885 1247 aa16.69■□□□□ 0.26
NDE1-209ENST00000574109 AOC3Q16853 763 aa16.69■□□□□ 0.26
NDE1-209ENST00000574109 COA1Q9GZY4 146 aa16.69■□□□□ 0.26
NDE1-209ENST00000574109 IRS2Q9Y4H2 1338 aa16.69■□□□□ 0.26
NDE1-209ENST00000574109 A0A1B0GUL7 405 aa16.68■□□□□ 0.26
NDE1-209ENST00000574109 G3V3G9 751 aa16.68■□□□□ 0.26
NDE1-209ENST00000574109 TNNI3KQ59H18 835 aa16.68■□□□□ 0.26
NDE1-209ENST00000574109 DCAF8Q5TAQ9 597 aa16.68■□□□□ 0.26
NDE1-209ENST00000574109 SLC51AQ86UW1 340 aa16.68■□□□□ 0.26
NDE1-209ENST00000574109 VPS37DQ86XT2 251 aa16.68■□□□□ 0.26
NDE1-209ENST00000574109 SMC5Q8IY18 1101 aa16.68■□□□□ 0.26
NDE1-209ENST00000574109 RNF181Q9P0P0 153 aa16.68■□□□□ 0.26
NDE1-209ENST00000574109 FPGT-TNNI3KV9GXZ4 949 aa16.68■□□□□ 0.26
NDE1-209ENST00000574109 MAST2Q6P0Q8 1798 aa16.68■□□□□ 0.26
NDE1-209ENST00000574109 COL4A5P29400 1685 aa16.68■□□□□ 0.26
NDE1-209ENST00000574109 PODNQ7Z5L7 613 aa16.67■□□□□ 0.26
NDE1-209ENST00000574109 GNL3LQ9NVN8 582 aaKnown RBP16.67■□□□□ 0.26
NDE1-209ENST00000574109 AKAP11Q9UKA4 1901 aa16.66■□□□□ 0.26
NDE1-209ENST00000574109 SCN4AP35499 1836 aa16.66■□□□□ 0.26
NDE1-209ENST00000574109 SEMA3EO15041 775 aa16.66■□□□□ 0.26
NDE1-209ENST00000574109 C9orf131Q5VYM1 1079 aa16.66■□□□□ 0.26
NDE1-209ENST00000574109 ECE2O60344 883 aa16.65■□□□□ 0.26
NDE1-209ENST00000574109 HIBADHP31937 336 aaKnown RBP16.65■□□□□ 0.26
NDE1-209ENST00000574109 GPATCH3Q96I76 525 aa16.65■□□□□ 0.26
NDE1-209ENST00000574109 ZNRF3Q9ULT6 936 aa16.65■□□□□ 0.26
NDE1-209ENST00000574109 DOCK2Q92608 1830 aa16.65■□□□□ 0.26
NDE1-209ENST00000574109 PDS5AQ29RF7 1337 aaKnown RBP16.65■□□□□ 0.26
NDE1-209ENST00000574109 MYH7P12883 1935 aa16.64■□□□□ 0.26
NDE1-209ENST00000574109 IFIT2P09913 472 aaKnown RBP16.64■□□□□ 0.25
NDE1-209ENST00000574109 IL1R1P14778 569 aa16.64■□□□□ 0.25
NDE1-209ENST00000574109 EIF6P56537 245 aaKnown RBP16.64■□□□□ 0.25
NDE1-209ENST00000574109 GORABQ5T7V8 394 aa16.64■□□□□ 0.25
NDE1-209ENST00000574109 CENPQQ7L2Z9 268 aaPredicted RBP16.64■□□□□ 0.25
NDE1-209ENST00000574109 AACSQ86V21 672 aa16.64■□□□□ 0.25
NDE1-209ENST00000574109 CCDC136Q96JN2 1154 aa16.64■□□□□ 0.25
NDE1-209ENST00000574109 AK9Q5TCS8 1911 aa16.64■□□□□ 0.25
NDE1-209ENST00000574109 WDR90Q96KV7 1748 aa16.64■□□□□ 0.25
NDE1-209ENST00000574109 FZD9O00144 591 aa16.63■□□□□ 0.25
NDE1-209ENST00000574109 APBB1O00213 710 aa16.63■□□□□ 0.25
NDE1-209ENST00000574109 RIMBP2O15034 1052 aa16.63■□□□□ 0.25
NDE1-209ENST00000574109 KLRK1P26718 216 aa16.63■□□□□ 0.25
NDE1-209ENST00000574109 CCDC158Q5M9N0 1113 aa16.63■□□□□ 0.25
NDE1-209ENST00000574109 FBXO33Q7Z6M2 555 aa16.63■□□□□ 0.25
NDE1-209ENST00000574109 XAGE2Q96GT9 111 aa16.63■□□□□ 0.25
NDE1-209ENST00000574109 NEUROD6Q96NK8 337 aa16.63■□□□□ 0.25
NDE1-209ENST00000574109 CD209Q9NNX6 404 aa16.63■□□□□ 0.25
NDE1-209ENST00000574109 IL1RAPL2Q9NP60 686 aa16.63■□□□□ 0.25
NDE1-209ENST00000574109 PPP4R2Q9NY27 417 aa16.63■□□□□ 0.25
NDE1-209ENST00000574109 MYO3BQ8WXR4 1341 aa16.63■□□□□ 0.25
NDE1-209ENST00000574109 ECM29Q5VYK3 1845 aa16.62■□□□□ 0.25
NDE1-209ENST00000574109 SNAP23O00161 211 aa16.62■□□□□ 0.25
NDE1-209ENST00000574109 UQCRFS1P1P0C7P4 283 aa16.62■□□□□ 0.25
NDE1-209ENST00000574109 TNIP1Q15025 636 aa16.62■□□□□ 0.25
NDE1-209ENST00000574109 EAF2Q96CJ1 260 aaPredicted RBP16.62■□□□□ 0.25
NDE1-209ENST00000574109 ZNF512BQ96KM6 892 aaPredicted RBP16.62■□□□□ 0.25
NDE1-209ENST00000574109 FAM84BQ96KN1 310 aaPredicted RBP16.62■□□□□ 0.25
NDE1-209ENST00000574109 GPR101Q96P66 508 aaPredicted RBP16.62■□□□□ 0.25
NDE1-209ENST00000574109 DBNDD1Q9H9R9 158 aa16.62■□□□□ 0.25
NDE1-209ENST00000574109 FRAT2O75474 233 aaPredicted RBP16.61■□□□□ 0.25
NDE1-209ENST00000574109 IGHDP01880 384 aa16.61■□□□□ 0.25
NDE1-209ENST00000574109 ARID4AP29374 1257 aaPredicted RBP16.61■□□□□ 0.25
NDE1-209ENST00000574109 GYG1P46976 350 aa16.61■□□□□ 0.25
NDE1-209ENST00000574109 PRELPP51888 382 aa16.61■□□□□ 0.25
NDE1-209ENST00000574109 TIMM10P62072 90 aa16.61■□□□□ 0.25
NDE1-209ENST00000574109 CCDC102BQ68D86 513 aa16.61■□□□□ 0.25
NDE1-209ENST00000574109 TXNRD3Q86VQ6 643 aa16.61■□□□□ 0.25
NDE1-209ENST00000574109 TDRD7Q8NHU6 1098 aaKnown RBP16.61■□□□□ 0.25
NDE1-209ENST00000574109 TBC1D22AQ8WUA7 517 aa16.61■□□□□ 0.25
NDE1-209ENST00000574109 DBNLQ9UJU6 430 aaKnown RBP16.61■□□□□ 0.25
NDE1-209ENST00000574109 KDM2BQ8NHM5 1336 aa16.61■□□□□ 0.25
NDE1-209ENST00000574109 IGSF3O75054 1194 aa16.6■□□□□ 0.25
NDE1-209ENST00000574109 ADORA1P30542 326 aa16.6■□□□□ 0.25
NDE1-209ENST00000574109 MMP14P50281 582 aa16.6■□□□□ 0.25
NDE1-209ENST00000574109 FKBP1AP62942 108 aaKnown RBP16.6■□□□□ 0.25
NDE1-209ENST00000574109 NUCB1Q02818 461 aa16.6■□□□□ 0.25
NDE1-209ENST00000574109 TTC39AQ5SRH9 613 aa16.6■□□□□ 0.25
NDE1-209ENST00000574109 ANKRD45Q5TZF3 282 aa16.6■□□□□ 0.25
NDE1-209ENST00000574109 STRIP1Q5VSL9 837 aa16.6■□□□□ 0.25
NDE1-209ENST00000574109 CIAPIN1Q6FI81 312 aa16.6■□□□□ 0.25
NDE1-209ENST00000574109 DPY19L2Q6NUT2 758 aa16.6■□□□□ 0.25
NDE1-209ENST00000574109 GPC2Q8N158 579 aa16.6■□□□□ 0.25
NDE1-209ENST00000574109 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.6■□□□□ 0.25
NDE1-209ENST00000574109 DENND2AQ9ULE3 1009 aa16.6■□□□□ 0.25
NDE1-209ENST00000574109 FAM205AQ6ZU69 1335 aa16.6■□□□□ 0.25
NDE1-209ENST00000574109 USP17L3A6NCW0 530 aa16.59■□□□□ 0.25
NDE1-209ENST00000574109 USP17L4A6NCW7 530 aa16.59■□□□□ 0.25
NDE1-209ENST00000574109 RPS12P25398 132 aaKnown RBP16.59■□□□□ 0.25
NDE1-209ENST00000574109 DOK7Q18PE1 504 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms