RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 USP17L4A6NCW7 530 aa14.35□□□□□ -0.11
RPAIN-214ENST00000574003 PLIN1O60240 522 aa14.35□□□□□ -0.11
RPAIN-214ENST00000574003 ALDH1L1O75891 902 aa14.35□□□□□ -0.11
RPAIN-214ENST00000574003 RPS12P25398 132 aaKnown RBP14.35□□□□□ -0.11
RPAIN-214ENST00000574003 IFIT5Q13325 482 aaKnown RBP14.35□□□□□ -0.11
RPAIN-214ENST00000574003 CYP4F22Q6NT55 531 aa14.35□□□□□ -0.11
RPAIN-214ENST00000574003 USP17L1Q7RTZ2 530 aa14.35□□□□□ -0.11
RPAIN-214ENST00000574003 PSME4Q14997 1843 aa14.35□□□□□ -0.11
RPAIN-214ENST00000574003 CDC37L1Q7L3B6 337 aa14.34□□□□□ -0.11
RPAIN-214ENST00000574003 ZC3H15Q8WU90 426 aaKnown RBP14.34□□□□□ -0.11
RPAIN-214ENST00000574003 GMLQ99445 158 aa14.34□□□□□ -0.11
RPAIN-214ENST00000574003 LEMD3Q9Y2U8 911 aa14.34□□□□□ -0.11
RPAIN-214ENST00000574003 WDR33Q9C0J8 1336 aaKnown RBP14.34□□□□□ -0.11
RPAIN-214ENST00000574003 ZNF646O15015 1829 aaPredicted RBP14.34□□□□□ -0.11
RPAIN-214ENST00000574003 A0A1B0GUL6 1792 aa14.33□□□□□ -0.12
RPAIN-214ENST00000574003 FOXN1O15353 648 aa14.33□□□□□ -0.12
RPAIN-214ENST00000574003 KCNJ4P48050 445 aa14.33□□□□□ -0.12
RPAIN-214ENST00000574003 IFFO2Q5TF58 517 aa14.33□□□□□ -0.12
RPAIN-214ENST00000574003 KRT26Q7Z3Y9 468 aa14.33□□□□□ -0.12
RPAIN-214ENST00000574003 PODNQ7Z5L7 613 aa14.33□□□□□ -0.12
RPAIN-214ENST00000574003 TRMT2AQ8IZ69 625 aaKnown RBP14.33□□□□□ -0.12
RPAIN-214ENST00000574003 CAPNS2Q96L46 248 aa14.33□□□□□ -0.12
RPAIN-214ENST00000574003 PUS3Q9BZE2 481 aaKnown RBP14.33□□□□□ -0.12
RPAIN-214ENST00000574003 ANKRD2Q9GZV1 360 aa14.33□□□□□ -0.12
RPAIN-214ENST00000574003 GGA3Q9NZ52 723 aa14.33□□□□□ -0.12
RPAIN-214ENST00000574003 TLL2Q9Y6L7 1015 aa14.33□□□□□ -0.12
RPAIN-214ENST00000574003 AOC2O75106 756 aa14.32□□□□□ -0.12
RPAIN-214ENST00000574003 ZNF280AP59817 542 aaPredicted RBP14.32□□□□□ -0.12
RPAIN-214ENST00000574003 CCDC57Q2TAC2 916 aa14.32□□□□□ -0.12
RPAIN-214ENST00000574003 TAF7LQ5H9L4 462 aa14.32□□□□□ -0.12
RPAIN-214ENST00000574003 DACT2Q5SW24 774 aa14.32□□□□□ -0.12
RPAIN-214ENST00000574003 MIER1Q8N108 512 aa14.32□□□□□ -0.12
RPAIN-214ENST00000574003 AGBL3Q8NEM8 1001 aa14.32□□□□□ -0.12
RPAIN-214ENST00000574003 COA1Q9GZY4 146 aa14.32□□□□□ -0.12
RPAIN-214ENST00000574003 SMC4Q9NTJ3 1288 aa14.32□□□□□ -0.12
RPAIN-214ENST00000574003 JAG2Q9Y219 1238 aa14.32□□□□□ -0.12
RPAIN-214ENST00000574003 IRS2Q9Y4H2 1338 aa14.32□□□□□ -0.12
RPAIN-214ENST00000574003 USP17L8P0C7I0 530 aa14.31□□□□□ -0.12
RPAIN-214ENST00000574003 GTF2IP78347 998 aa14.31□□□□□ -0.12
RPAIN-214ENST00000574003 SCARF1Q14162 830 aa14.31□□□□□ -0.12
RPAIN-214ENST00000574003 ANGEL2Q5VTE6 544 aaKnown RBP14.31□□□□□ -0.12
RPAIN-214ENST00000574003 LDHAL6AQ6ZMR3 332 aa14.31□□□□□ -0.12
RPAIN-214ENST00000574003 SAPCD2Q86UD0 394 aa14.31□□□□□ -0.12
RPAIN-214ENST00000574003 ANKRD44Q8N8A2 993 aa14.31□□□□□ -0.12
RPAIN-214ENST00000574003 DCPSQ96C86 337 aaKnown RBP14.31□□□□□ -0.12
RPAIN-214ENST00000574003 BICC1Q9H694 974 aaKnown RBP14.31□□□□□ -0.12
RPAIN-214ENST00000574003 CNNM1Q9NRU3 951 aa14.31□□□□□ -0.12
RPAIN-214ENST00000574003 TTLL5Q6EMB2 1281 aa14.3□□□□□ -0.12
RPAIN-214ENST00000574003 KLHDC4Q8TBB5 520 aa14.3□□□□□ -0.12
RPAIN-214ENST00000574003 CD209Q9NNX6 404 aa14.3□□□□□ -0.12
RPAIN-214ENST00000574003 MYOZ2Q9NPC6 264 aa14.3□□□□□ -0.12
RPAIN-214ENST00000574003 PTPRCP08575 1304 aa14.3□□□□□ -0.12
RPAIN-214ENST00000574003 NBPF9Q3BBW0 867 aa14.29□□□□□ -0.12
RPAIN-214ENST00000574003 LRRC24Q50LG9 513 aa14.29□□□□□ -0.12
RPAIN-214ENST00000574003 STRIP1Q5VSL9 837 aa14.29□□□□□ -0.12
RPAIN-214ENST00000574003 PRAMEF18Q5VWM3 479 aa14.29□□□□□ -0.12
RPAIN-214ENST00000574003 KIAA0825Q8IV33 1275 aa14.29□□□□□ -0.12
RPAIN-214ENST00000574003 ZIC5Q96T25 663 aa14.29□□□□□ -0.12
RPAIN-214ENST00000574003 USP44Q9H0E7 712 aa14.29□□□□□ -0.12
RPAIN-214ENST00000574003 WBP1LQ9NX94 342 aa14.29□□□□□ -0.12
RPAIN-214ENST00000574003 NOB1Q9ULX3 412 aaKnown RBP14.29□□□□□ -0.12
RPAIN-214ENST00000574003 PCDHAC2Q9Y5I4 1007 aa14.29□□□□□ -0.12
RPAIN-214ENST00000574003 UTYO14607 1347 aa14.29□□□□□ -0.12
RPAIN-214ENST00000574003 ZNF609O15014 1411 aa14.29□□□□□ -0.12
RPAIN-214ENST00000574003 SASH1O94885 1247 aa14.28□□□□□ -0.12
RPAIN-214ENST00000574003 ALDH1L2Q3SY69 923 aa14.28□□□□□ -0.12
RPAIN-214ENST00000574003 CERS5Q8N5B7 392 aa14.28□□□□□ -0.12
RPAIN-214ENST00000574003 HUNKP57058 714 aa14.27□□□□□ -0.13
RPAIN-214ENST00000574003 RABL6Q3YEC7 729 aaPredicted RBP14.27□□□□□ -0.13
RPAIN-214ENST00000574003 DIEXFQ68CQ4 756 aaKnown RBP14.27□□□□□ -0.13
RPAIN-214ENST00000574003 SULF1Q8IWU6 871 aa14.27□□□□□ -0.13
RPAIN-214ENST00000574003 CDCA5Q96FF9 252 aa14.27□□□□□ -0.13
RPAIN-214ENST00000574003 GBA2Q9HCG7 927 aaPredicted RBP14.27□□□□□ -0.13
RPAIN-214ENST00000574003 TSKSQ9UJT2 592 aa14.27□□□□□ -0.13
RPAIN-214ENST00000574003 F8W031 263 aaPredicted RBP14.26□□□□□ -0.13
RPAIN-214ENST00000574003 ECE1P42892 770 aa14.26□□□□□ -0.13
RPAIN-214ENST00000574003 GYG1P46976 350 aa14.26□□□□□ -0.13
RPAIN-214ENST00000574003 LBX1P52954 281 aa14.26□□□□□ -0.13
RPAIN-214ENST00000574003 MOB2Q70IA6 237 aa14.26□□□□□ -0.13
RPAIN-214ENST00000574003 TNS4Q8IZW8 715 aa14.26□□□□□ -0.13
RPAIN-214ENST00000574003 AIDAQ96BJ3 306 aa14.26□□□□□ -0.13
RPAIN-214ENST00000574003 TNNQ9UQP3 1299 aa14.26□□□□□ -0.13
RPAIN-214ENST00000574003 RIPOR2Q9Y4F9 1068 aa14.26□□□□□ -0.13
RPAIN-214ENST00000574003 AOX1Q06278 1338 aa14.25□□□□□ -0.13
RPAIN-214ENST00000574003 WNT10BO00744 389 aa14.25□□□□□ -0.13
RPAIN-214ENST00000574003 CAPN15O75808 1086 aa14.25□□□□□ -0.13
RPAIN-214ENST00000574003 HSPA8P11142 646 aaKnown RBP14.25□□□□□ -0.13
RPAIN-214ENST00000574003 RARSP54136 660 aaKnown RBP14.25□□□□□ -0.13
RPAIN-214ENST00000574003 C15orf52Q6ZUT6 534 aaKnown RBP14.25□□□□□ -0.13
RPAIN-214ENST00000574003 THSD7BQ9C0I4 1608 aa14.24□□□□□ -0.13
RPAIN-214ENST00000574003 IL1R1P14778 569 aa14.24□□□□□ -0.13
RPAIN-214ENST00000574003 CTCFP49711 727 aaPredicted RBP14.24□□□□□ -0.13
RPAIN-214ENST00000574003 ZNF804AQ7Z570 1209 aa14.24□□□□□ -0.13
RPAIN-214ENST00000574003 OGFOD1Q8N543 542 aa14.24□□□□□ -0.13
RPAIN-214ENST00000574003 IQSEC3Q9UPP2 1182 aaPredicted RBP14.24□□□□□ -0.13
RPAIN-214ENST00000574003 MYO3BQ8WXR4 1341 aa14.23□□□□□ -0.13
RPAIN-214ENST00000574003 RFX5P48382 616 aaPredicted RBP14.23□□□□□ -0.13
RPAIN-214ENST00000574003 MAP2K1Q02750 393 aaPredicted RBP14.23□□□□□ -0.13
RPAIN-214ENST00000574003 METTL24Q5JXM2 366 aa14.23□□□□□ -0.13
RPAIN-214ENST00000574003 C2orf69Q8N8R5 385 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms