RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 CHADLQ6NUI6 762 aa16.91■□□□□ 0.3
RPAIN-213ENST00000573577 LDHAL6AQ6ZMR3 332 aa16.91■□□□□ 0.3
RPAIN-213ENST00000573577 LDHDQ86WU2 507 aa16.91■□□□□ 0.3
RPAIN-213ENST00000573577 GPRC5DQ9NZD1 345 aa16.91■□□□□ 0.3
RPAIN-213ENST00000573577 LRRFIP2Q9Y608 721 aaKnown RBP16.91■□□□□ 0.3
RPAIN-213ENST00000573577 ZNF804BA4D1E1 1349 aa16.91■□□□□ 0.3
RPAIN-213ENST00000573577 PSMD14O00487 310 aa16.9■□□□□ 0.3
RPAIN-213ENST00000573577 MVPQ14764 893 aaKnown RBP16.9■□□□□ 0.3
RPAIN-213ENST00000573577 KCNQ5Q9NR82 932 aa16.9■□□□□ 0.3
RPAIN-213ENST00000573577 DDX19BQ9UMR2 479 aa16.9■□□□□ 0.3
RPAIN-213ENST00000573577 KCNJ4P48050 445 aa16.89■□□□□ 0.29
RPAIN-213ENST00000573577 APLP1P51693 650 aa16.89■□□□□ 0.29
RPAIN-213ENST00000573577 RRP1P56182 461 aaKnown RBP16.89■□□□□ 0.29
RPAIN-213ENST00000573577 CNNM1Q9NRU3 951 aa16.89■□□□□ 0.29
RPAIN-213ENST00000573577 ADAMTSL1Q8N6G6 1762 aa16.89■□□□□ 0.29
RPAIN-213ENST00000573577 ZBTB7BO15156 539 aaPredicted RBP16.88■□□□□ 0.29
RPAIN-213ENST00000573577 TAF5LO75529 589 aa16.88■□□□□ 0.29
RPAIN-213ENST00000573577 USP50Q70EL3 339 aaPredicted RBP16.88■□□□□ 0.29
RPAIN-213ENST00000573577 PODNQ7Z5L7 613 aa16.88■□□□□ 0.29
RPAIN-213ENST00000573577 HELBQ8NG08 1087 aaPredicted RBP16.88■□□□□ 0.29
RPAIN-213ENST00000573577 ADARB2Q9NS39 739 aaKnown RBP16.88■□□□□ 0.29
RPAIN-213ENST00000573577 COG6Q9Y2V7 657 aa16.88■□□□□ 0.29
RPAIN-213ENST00000573577 ZBTB12Q9Y330 459 aaPredicted RBP16.88■□□□□ 0.29
RPAIN-213ENST00000573577 RPS12P25398 132 aaKnown RBP16.87■□□□□ 0.29
RPAIN-213ENST00000573577 KLRK1P26718 216 aa16.87■□□□□ 0.29
RPAIN-213ENST00000573577 TXNRD3Q86VQ6 643 aa16.87■□□□□ 0.29
RPAIN-213ENST00000573577 DPF2Q92785 391 aa16.87■□□□□ 0.29
RPAIN-213ENST00000573577 COA1Q9GZY4 146 aa16.87■□□□□ 0.29
RPAIN-213ENST00000573577 CLEC11AQ9Y240 323 aa16.87■□□□□ 0.29
RPAIN-213ENST00000573577 A0A1B0GUL6 1792 aa16.87■□□□□ 0.29
RPAIN-213ENST00000573577 CEP350Q5VT06 3117 aa16.86■□□□□ 0.29
RPAIN-213ENST00000573577 SCN9AQ15858 1988 aa16.86■□□□□ 0.29
RPAIN-213ENST00000573577 SNAP23O00161 211 aa16.86■□□□□ 0.29
RPAIN-213ENST00000573577 VIL1P09327 827 aaKnown RBP16.86■□□□□ 0.29
RPAIN-213ENST00000573577 PUS3Q9BZE2 481 aaKnown RBP16.86■□□□□ 0.29
RPAIN-213ENST00000573577 CNOT7Q9UIV1 285 aaKnown RBP16.86■□□□□ 0.29
RPAIN-213ENST00000573577 MTX1Q13505 466 aa16.85■□□□□ 0.29
RPAIN-213ENST00000573577 C15orf52Q6ZUT6 534 aaKnown RBP16.85■□□□□ 0.29
RPAIN-213ENST00000573577 MICALL2Q8IY33 904 aa16.85■□□□□ 0.29
RPAIN-213ENST00000573577 RIPOR2Q9Y4F9 1068 aa16.85■□□□□ 0.29
RPAIN-213ENST00000573577 IRS2Q9Y4H2 1338 aa16.85■□□□□ 0.29
RPAIN-213ENST00000573577 ZNF609O15014 1411 aa16.85■□□□□ 0.29
RPAIN-213ENST00000573577 SHTN1A0MZ66 631 aa16.84■□□□□ 0.29
RPAIN-213ENST00000573577 USP17L3A6NCW0 530 aa16.84■□□□□ 0.29
RPAIN-213ENST00000573577 USP17L4A6NCW7 530 aa16.84■□□□□ 0.29
RPAIN-213ENST00000573577 H7C1D1 291 aa16.84■□□□□ 0.29
RPAIN-213ENST00000573577 SRGAP3O43295 1099 aa16.84■□□□□ 0.29
RPAIN-213ENST00000573577 C20orf194Q5TEA3 1177 aa16.84■□□□□ 0.29
RPAIN-213ENST00000573577 MAP1SQ66K74 1059 aaPredicted RBP16.84■□□□□ 0.29
RPAIN-213ENST00000573577 RSBN1LQ6PCB5 846 aaPredicted RBP16.84■□□□□ 0.29
RPAIN-213ENST00000573577 USP17L1Q7RTZ2 530 aa16.84■□□□□ 0.29
RPAIN-213ENST00000573577 KLHDC4Q8TBB5 520 aa16.84■□□□□ 0.29
RPAIN-213ENST00000573577 MROH5Q6ZUA9 1318 aa16.84■□□□□ 0.29
RPAIN-213ENST00000573577 RFX5P48382 616 aaPredicted RBP16.83■□□□□ 0.28
RPAIN-213ENST00000573577 LRRC24Q50LG9 513 aa16.83■□□□□ 0.28
RPAIN-213ENST00000573577 AGBL3Q8NEM8 1001 aa16.83■□□□□ 0.28
RPAIN-213ENST00000573577 FBXO3Q9UK99 471 aa16.83■□□□□ 0.28
RPAIN-213ENST00000573577 PSME4Q14997 1843 aa16.82■□□□□ 0.28
RPAIN-213ENST00000573577 PASKQ96RG2 1323 aa16.82■□□□□ 0.28
RPAIN-213ENST00000573577 ITGBL1O95965 494 aaPredicted RBP16.82■□□□□ 0.28
RPAIN-213ENST00000573577 UBE4AQ14139 1066 aa16.82■□□□□ 0.28
RPAIN-213ENST00000573577 METTL24Q5JXM2 366 aa16.82■□□□□ 0.28
RPAIN-213ENST00000573577 ZNF804AQ7Z570 1209 aa16.82■□□□□ 0.28
RPAIN-213ENST00000573577 CNTROBQ8N137 903 aa16.82■□□□□ 0.28
RPAIN-213ENST00000573577 TRPM4Q8TD43 1214 aa16.82■□□□□ 0.28
RPAIN-213ENST00000573577 HIRAP54198 1017 aaPredicted RBP16.81■□□□□ 0.28
RPAIN-213ENST00000573577 HTRA3P83110 453 aa16.81■□□□□ 0.28
RPAIN-213ENST00000573577 PTPN12Q05209 780 aaKnown RBP16.81■□□□□ 0.28
RPAIN-213ENST00000573577 DACT2Q5SW24 774 aa16.81■□□□□ 0.28
RPAIN-213ENST00000573577 STRIP1Q5VSL9 837 aa16.81■□□□□ 0.28
RPAIN-213ENST00000573577 GMLQ99445 158 aa16.81■□□□□ 0.28
RPAIN-213ENST00000573577 C1orf115Q9H7X2 142 aa16.81■□□□□ 0.28
RPAIN-213ENST00000573577 CD209Q9NNX6 404 aa16.81■□□□□ 0.28
RPAIN-213ENST00000573577 COPRSQ9NQ92 184 aa16.81■□□□□ 0.28
RPAIN-213ENST00000573577 ZBTB40Q9NUA8 1239 aa16.81■□□□□ 0.28
RPAIN-213ENST00000573577 EYA2O00167 538 aa16.8■□□□□ 0.28
RPAIN-213ENST00000573577 ATP8B2P98198 1209 aa16.8■□□□□ 0.28
RPAIN-213ENST00000573577 TBC1D10BQ4KMP7 808 aaPredicted RBP16.8■□□□□ 0.28
RPAIN-213ENST00000573577 SAMD7Q7Z3H4 446 aa16.8■□□□□ 0.28
RPAIN-213ENST00000573577 VGLL2Q8N8G2 317 aa16.8■□□□□ 0.28
RPAIN-213ENST00000573577 ZC3H15Q8WU90 426 aaKnown RBP16.8■□□□□ 0.28
RPAIN-213ENST00000573577 FBXW7Q969H0 707 aa16.8■□□□□ 0.28
RPAIN-213ENST00000573577 MYO3BQ8WXR4 1341 aa16.79■□□□□ 0.28
RPAIN-213ENST00000573577 CIAO1O76071 339 aa16.79■□□□□ 0.28
RPAIN-213ENST00000573577 PDE8BO95263 885 aa16.79■□□□□ 0.28
RPAIN-213ENST00000573577 EGFRP00533 1210 aa16.79■□□□□ 0.28
RPAIN-213ENST00000573577 USP17L8P0C7I0 530 aa16.79■□□□□ 0.28
RPAIN-213ENST00000573577 IL1R1P14778 569 aa16.79■□□□□ 0.28
RPAIN-213ENST00000573577 ZNF280AP59817 542 aaPredicted RBP16.79■□□□□ 0.28
RPAIN-213ENST00000573577 TTLL5Q6EMB2 1281 aa16.79■□□□□ 0.28
RPAIN-213ENST00000573577 PGAP2Q9UHJ9 254 aa16.79■□□□□ 0.28
RPAIN-213ENST00000573577 SUPT16HQ9Y5B9 1047 aaKnown RBP16.79■□□□□ 0.28
RPAIN-213ENST00000573577 ZNF646O15015 1829 aaPredicted RBP16.78■□□□□ 0.28
RPAIN-213ENST00000573577 PNMA6EA0A0J9YXQ4 647 aa16.78■□□□□ 0.28
RPAIN-213ENST00000573577 IL15P40933 162 aaPredicted RBP16.78■□□□□ 0.28
RPAIN-213ENST00000573577 GTF2IP78347 998 aa16.78■□□□□ 0.28
RPAIN-213ENST00000573577 KIF4BQ2VIQ3 1234 aa16.78■□□□□ 0.28
RPAIN-213ENST00000573577 CEP85Q6P2H3 762 aa16.78■□□□□ 0.28
RPAIN-213ENST00000573577 ATG9AQ7Z3C6 839 aa16.78■□□□□ 0.28
RPAIN-213ENST00000573577 RPAP2Q8IXW5 612 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms