RNA–Protein interactions for RNA: ENST00000572980.5

TVP23A-206, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-206ENST00000572980 GCC1Q96CN9 775 aa28.74■■■□□ 2.19
TVP23A-206ENST00000572980 GPR108Q9NPR9 543 aa28.74■■■□□ 2.19
TVP23A-206ENST00000572980 G3V3G9 751 aa28.73■■■□□ 2.19
TVP23A-206ENST00000572980 DCAF8Q5TAQ9 597 aa28.73■■■□□ 2.19
TVP23A-206ENST00000572980 SBF1O95248 1867 aa28.73■■■□□ 2.19
TVP23A-206ENST00000572980 RNF181Q9P0P0 153 aa28.72■■■□□ 2.19
TVP23A-206ENST00000572980 CCDC88AQ3V6T2 1871 aa28.72■■■□□ 2.19
TVP23A-206ENST00000572980 IGHDP01880 384 aa28.71■■■□□ 2.19
TVP23A-206ENST00000572980 C9orf131Q5VYM1 1079 aa28.71■■■□□ 2.19
TVP23A-206ENST00000572980 LRRCC1Q9C099 1032 aa28.71■■■□□ 2.19
TVP23A-206ENST00000572980 A0A1B0GUL7 405 aa28.71■■■□□ 2.19
TVP23A-206ENST00000572980 CAVIN4Q5BKX8 364 aa28.71■■■□□ 2.19
TVP23A-206ENST00000572980 TXNRD3Q86VQ6 643 aa28.71■■■□□ 2.19
TVP23A-206ENST00000572980 NIM1KQ8IY84 436 aa28.71■■■□□ 2.19
TVP23A-206ENST00000572980 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.71■■■□□ 2.19
TVP23A-206ENST00000572980 KLRK1P26718 216 aa28.7■■■□□ 2.18
TVP23A-206ENST00000572980 TIMM10P62072 90 aa28.7■■■□□ 2.18
TVP23A-206ENST00000572980 TNNI3KQ59H18 835 aa28.7■■■□□ 2.18
TVP23A-206ENST00000572980 CLASRPQ8N2M8 674 aaKnown RBP28.7■■■□□ 2.18
TVP23A-206ENST00000572980 NEUROD6Q96NK8 337 aa28.7■■■□□ 2.18
TVP23A-206ENST00000572980 FPGT-TNNI3KV9GXZ4 949 aa28.7■■■□□ 2.18
TVP23A-206ENST00000572980 IRS2Q9Y4H2 1338 aa28.69■■■□□ 2.18
TVP23A-206ENST00000572980 ZNF804AQ7Z570 1209 aa28.69■■■□□ 2.18
TVP23A-206ENST00000572980 COA1Q9GZY4 146 aa28.68■■■□□ 2.18
TVP23A-206ENST00000572980 IL1RAPL2Q9NP60 686 aa28.68■■■□□ 2.18
TVP23A-206ENST00000572980 DOK7Q18PE1 504 aa28.67■■■□□ 2.18
TVP23A-206ENST00000572980 VPS37DQ86XT2 251 aa28.67■■■□□ 2.18
TVP23A-206ENST00000572980 ZBTB47Q9UFB7 747 aaPredicted RBP28.67■■■□□ 2.18
TVP23A-206ENST00000572980 HIBADHP31937 336 aaKnown RBP28.67■■■□□ 2.18
TVP23A-206ENST00000572980 SMC5Q8IY18 1101 aa28.67■■■□□ 2.18
TVP23A-206ENST00000572980 FAM84BQ96KN1 310 aaPredicted RBP28.67■■■□□ 2.18
TVP23A-206ENST00000572980 DBNDD1Q9H9R9 158 aa28.67■■■□□ 2.18
TVP23A-206ENST00000572980 DICER1Q9UPY3 1922 aaKnown RBP28.66■■■□□ 2.18
TVP23A-206ENST00000572980 ZNF609O15014 1411 aa28.66■■■□□ 2.18
TVP23A-206ENST00000572980 GYG1P46976 350 aa28.66■■■□□ 2.18
TVP23A-206ENST00000572980 PODNQ7Z5L7 613 aa28.66■■■□□ 2.18
TVP23A-206ENST00000572980 ZNRF3Q9ULT6 936 aa28.66■■■□□ 2.18
TVP23A-206ENST00000572980 ECE2O60344 883 aa28.65■■■□□ 2.18
TVP23A-206ENST00000572980 AACSQ86V21 672 aa28.65■■■□□ 2.18
TVP23A-206ENST00000572980 EAF2Q96CJ1 260 aaPredicted RBP28.65■■■□□ 2.18
TVP23A-206ENST00000572980 XAGE2Q96GT9 111 aa28.65■■■□□ 2.18
TVP23A-206ENST00000572980 GORABQ5T7V8 394 aa28.64■■■□□ 2.18
TVP23A-206ENST00000572980 FBXO33Q7Z6M2 555 aa28.64■■■□□ 2.18
TVP23A-206ENST00000572980 BCL11AQ9H165 835 aa28.64■■■□□ 2.18
TVP23A-206ENST00000572980 ANKRD45Q5TZF3 282 aa28.63■■■□□ 2.17
TVP23A-206ENST00000572980 CD209Q9NNX6 404 aa28.63■■■□□ 2.17
TVP23A-206ENST00000572980 ZC3H4Q9UPT8 1303 aaKnown RBP28.63■■■□□ 2.17
TVP23A-206ENST00000572980 ADORA1P30542 326 aa28.62■■■□□ 2.17
TVP23A-206ENST00000572980 BCAMP50895 628 aa28.62■■■□□ 2.17
TVP23A-206ENST00000572980 COL4A5P29400 1685 aa28.62■■■□□ 2.17
TVP23A-206ENST00000572980 CHD4Q14839 1912 aa28.62■■■□□ 2.17
TVP23A-206ENST00000572980 FZD9O00144 591 aa28.62■■■□□ 2.17
TVP23A-206ENST00000572980 SMARCA5O60264 1052 aaPredicted RBP28.62■■■□□ 2.17
TVP23A-206ENST00000572980 IFIT2P09913 472 aaKnown RBP28.62■■■□□ 2.17
TVP23A-206ENST00000572980 EIF6P56537 245 aaKnown RBP28.62■■■□□ 2.17
TVP23A-206ENST00000572980 CCDC136Q96JN2 1154 aa28.62■■■□□ 2.17
TVP23A-206ENST00000572980 CCDC8Q9H0W5 538 aaPredicted RBP28.62■■■□□ 2.17
TVP23A-206ENST00000572980 GNL3LQ9NVN8 582 aaKnown RBP28.62■■■□□ 2.17
TVP23A-206ENST00000572980 IL1R1P14778 569 aa28.61■■■□□ 2.17
TVP23A-206ENST00000572980 ARAP2Q8WZ64 1704 aa28.6■■■□□ 2.17
TVP23A-206ENST00000572980 CCDC102BQ68D86 513 aa28.6■■■□□ 2.17
TVP23A-206ENST00000572980 DBNDD2Q9BQY9 259 aa28.6■■■□□ 2.17
TVP23A-206ENST00000572980 CCDC158Q5M9N0 1113 aa28.59■■■□□ 2.17
TVP23A-206ENST00000572980 B4GALNT3Q6L9W6 998 aa28.59■■■□□ 2.17
TVP23A-206ENST00000572980 DBNLQ9UJU6 430 aaKnown RBP28.59■■■□□ 2.17
TVP23A-206ENST00000572980 YDJCA8MPS7 323 aa28.58■■■□□ 2.17
TVP23A-206ENST00000572980 FRAT2O75474 233 aaPredicted RBP28.58■■■□□ 2.17
TVP23A-206ENST00000572980 TDRD7Q8NHU6 1098 aaKnown RBP28.58■■■□□ 2.17
TVP23A-206ENST00000572980 PPP4R2Q9NY27 417 aa28.58■■■□□ 2.17
TVP23A-206ENST00000572980 TIAM2Q8IVF5 1701 aa28.58■■■□□ 2.17
TVP23A-206ENST00000572980 PHKA1P46020 1223 aa28.58■■■□□ 2.17
TVP23A-206ENST00000572980 DPY19L2Q6NUT2 758 aa28.57■■■□□ 2.16
TVP23A-206ENST00000572980 TLR7Q9NYK1 1049 aaKnown RBP28.57■■■□□ 2.16
TVP23A-206ENST00000572980 RAD17O75943 681 aa28.56■■■□□ 2.16
TVP23A-206ENST00000572980 CXCL9Q07325 125 aa28.56■■■□□ 2.16
TVP23A-206ENST00000572980 TNIP1Q15025 636 aa28.56■■■□□ 2.16
TVP23A-206ENST00000572980 CIAPIN1Q6FI81 312 aa28.56■■■□□ 2.16
TVP23A-206ENST00000572980 NUCB1Q02818 461 aa28.55■■■□□ 2.16
TVP23A-206ENST00000572980 TTC39AQ5SRH9 613 aa28.55■■■□□ 2.16
TVP23A-206ENST00000572980 CENPQQ7L2Z9 268 aaPredicted RBP28.55■■■□□ 2.16
TVP23A-206ENST00000572980 KCNQ5Q9NR82 932 aa28.55■■■□□ 2.16
TVP23A-206ENST00000572980 USP17L3A6NCW0 530 aa28.54■■■□□ 2.16
TVP23A-206ENST00000572980 USP17L4A6NCW7 530 aa28.54■■■□□ 2.16
TVP23A-206ENST00000572980 SEMA3EO15041 775 aa28.54■■■□□ 2.16
TVP23A-206ENST00000572980 UQCRFS1P1P0C7P4 283 aa28.54■■■□□ 2.16
TVP23A-206ENST00000572980 TTLL5Q6EMB2 1281 aa28.54■■■□□ 2.16
TVP23A-206ENST00000572980 USP17L1Q7RTZ2 530 aa28.54■■■□□ 2.16
TVP23A-206ENST00000572980 IQSEC3Q9UPP2 1182 aaPredicted RBP28.54■■■□□ 2.16
TVP23A-206ENST00000572980 CHD1LQ86WJ1 897 aa28.54■■■□□ 2.16
TVP23A-206ENST00000572980 ZBTB22O15209 634 aa28.53■■■□□ 2.16
TVP23A-206ENST00000572980 GTF2IP78347 998 aa28.53■■■□□ 2.16
TVP23A-206ENST00000572980 STRIP1Q5VSL9 837 aa28.53■■■□□ 2.16
TVP23A-206ENST00000572980 ZNF541Q9H0D2 1346 aa28.53■■■□□ 2.16
TVP23A-206ENST00000572980 GPC2Q8N158 579 aa28.52■■■□□ 2.16
TVP23A-206ENST00000572980 FBXW7Q969H0 707 aa28.52■■■□□ 2.16
TVP23A-206ENST00000572980 ZNF512BQ96KM6 892 aaPredicted RBP28.52■■■□□ 2.16
TVP23A-206ENST00000572980 LNPKQ9C0E8 428 aa28.52■■■□□ 2.16
TVP23A-206ENST00000572980 DENND2AQ9ULE3 1009 aa28.52■■■□□ 2.16
TVP23A-206ENST00000572980 KDM2BQ8NHM5 1336 aa28.52■■■□□ 2.16
TVP23A-206ENST00000572980 PSMD14O00487 310 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms