RNA–Protein interactions for RNA: ENST00000572445.1

PRPF8-204, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-204ENST00000572445 PER1O15534 1290 aaPredicted RBP8.33□□□□□ -1.08
PRPF8-204ENST00000572445 ATP9BO43861 1147 aa8.33□□□□□ -1.08
PRPF8-204ENST00000572445 CAMTA2O94983 1202 aa8.33□□□□□ -1.08
PRPF8-204ENST00000572445 SOX11P35716 441 aa8.33□□□□□ -1.08
PRPF8-204ENST00000572445 EIF5P55010 431 aaKnown RBP8.33□□□□□ -1.08
PRPF8-204ENST00000572445 SEMA3FQ13275 785 aa8.33□□□□□ -1.08
PRPF8-204ENST00000572445 EAPPQ56P03 285 aaPredicted RBP8.33□□□□□ -1.08
PRPF8-204ENST00000572445 GPR153Q6NV75 609 aa8.33□□□□□ -1.08
PRPF8-204ENST00000572445 PRPF40BQ6NWY9 871 aaKnown RBP8.33□□□□□ -1.08
PRPF8-204ENST00000572445 NBPF5PQ86XG9 351 aaPredicted RBP8.33□□□□□ -1.08
PRPF8-204ENST00000572445 RTF1Q92541 710 aaKnown RBP8.33□□□□□ -1.08
PRPF8-204ENST00000572445 SYMPKQ92797 1274 aaKnown RBP8.33□□□□□ -1.08
PRPF8-204ENST00000572445 DCBLD2Q96PD2 775 aa8.33□□□□□ -1.08
PRPF8-204ENST00000572445 SETDB2Q96T68 719 aa8.33□□□□□ -1.08
PRPF8-204ENST00000572445 TAOK3Q9H2K8 898 aa8.33□□□□□ -1.08
PRPF8-204ENST00000572445 GLTPD2A6NH11 291 aa8.32□□□□□ -1.08
PRPF8-204ENST00000572445 HSPA1AP0DMV8 641 aaKnown RBP8.32□□□□□ -1.08
PRPF8-204ENST00000572445 HSPA1BP0DMV9 641 aaKnown RBP8.32□□□□□ -1.08
PRPF8-204ENST00000572445 FSTL1Q12841 308 aa8.32□□□□□ -1.08
PRPF8-204ENST00000572445 TNS4Q8IZW8 715 aa8.32□□□□□ -1.08
PRPF8-204ENST00000572445 DNAJC5GQ8N7S2 189 aa8.32□□□□□ -1.08
PRPF8-204ENST00000572445 THUMPD2Q9BTF0 503 aaKnown RBP8.32□□□□□ -1.08
PRPF8-204ENST00000572445 IGSF5Q9NSI5 407 aa8.32□□□□□ -1.08
PRPF8-204ENST00000572445 USP16Q9Y5T5 823 aa8.32□□□□□ -1.08
PRPF8-204ENST00000572445 KDM3BQ7LBC6 1761 aa8.32□□□□□ -1.08
PRPF8-204ENST00000572445 ZNF541Q9H0D2 1346 aa8.31□□□□□ -1.08
PRPF8-204ENST00000572445 C6orf229H3BNL8 230 aa8.31□□□□□ -1.08
PRPF8-204ENST00000572445 DDNO94850 711 aaPredicted RBP8.31□□□□□ -1.08
PRPF8-204ENST00000572445 VEGFAP15692 232 aaPredicted RBP8.31□□□□□ -1.08
PRPF8-204ENST00000572445 GPTP24298 496 aa8.31□□□□□ -1.08
PRPF8-204ENST00000572445 GTF2E1P29083 439 aaPredicted RBP8.31□□□□□ -1.08
PRPF8-204ENST00000572445 PDE6BP35913 854 aa8.31□□□□□ -1.08
PRPF8-204ENST00000572445 GRM1Q13255 1194 aa8.31□□□□□ -1.08
PRPF8-204ENST00000572445 NOM1Q5C9Z4 860 aaKnown RBP8.31□□□□□ -1.08
PRPF8-204ENST00000572445 PACS2Q86VP3 889 aa8.31□□□□□ -1.08
PRPF8-204ENST00000572445 SLF2Q8IX21 1173 aa8.31□□□□□ -1.08
PRPF8-204ENST00000572445 ZNF277Q9NRM2 450 aaPredicted RBP8.31□□□□□ -1.08
PRPF8-204ENST00000572445 NIP7Q9Y221 180 aaKnown RBP eCLIP8.31□□□□□ -1.08
PRPF8-204ENST00000572445 ABCC12Q96J65 1359 aa8.31□□□□□ -1.08
PRPF8-204ENST00000572445 RBM47A0AV96 593 aaKnown RBP8.3□□□□□ -1.08
PRPF8-204ENST00000572445 MYL6BP14649 208 aa8.3□□□□□ -1.08
PRPF8-204ENST00000572445 PTPREP23469 700 aa8.3□□□□□ -1.08
PRPF8-204ENST00000572445 IL6STP40189 918 aaPredicted RBP8.3□□□□□ -1.08
PRPF8-204ENST00000572445 PPP4R3BQ5MIZ7 849 aa8.3□□□□□ -1.08
PRPF8-204ENST00000572445 SWT1Q5T5J6 900 aaKnown RBP8.3□□□□□ -1.08
PRPF8-204ENST00000572445 DNAJC14Q6Y2X3 702 aaPredicted RBP8.3□□□□□ -1.08
PRPF8-204ENST00000572445 KIAA1522Q9P206 1035 aaPredicted RBP8.3□□□□□ -1.08
PRPF8-204ENST00000572445 TAF1P21675 1872 aa8.3□□□□□ -1.08
PRPF8-204ENST00000572445 PPP2R1AP30153 589 aa8.29□□□□□ -1.08
PRPF8-204ENST00000572445 ELOAQ14241 798 aaKnown RBP8.29□□□□□ -1.08
PRPF8-204ENST00000572445 HLFQ16534 295 aa8.29□□□□□ -1.08
PRPF8-204ENST00000572445 BRIP1Q9BX63 1249 aa8.29□□□□□ -1.08
PRPF8-204ENST00000572445 NOVA2Q9UNW9 492 aaKnown RBP8.29□□□□□ -1.08
PRPF8-204ENST00000572445 NUDCQ9Y266 331 aa8.29□□□□□ -1.08
PRPF8-204ENST00000572445 RRP7AQ9Y3A4 280 aaKnown RBP8.29□□□□□ -1.08
PRPF8-204ENST00000572445 CEMIPQ8WUJ3 1361 aa8.29□□□□□ -1.08
PRPF8-204ENST00000572445 SCN4AP35499 1836 aa8.29□□□□□ -1.08
PRPF8-204ENST00000572445 RNF123Q5XPI4 1314 aa8.29□□□□□ -1.08
PRPF8-204ENST00000572445 LAMB2P55268 1798 aa8.28□□□□□ -1.08
PRPF8-204ENST00000572445 POTECB2RU33 542 aa8.28□□□□□ -1.08
PRPF8-204ENST00000572445 FUT2Q10981 343 aa8.28□□□□□ -1.08
PRPF8-204ENST00000572445 CCDC93Q567U6 631 aa8.28□□□□□ -1.08
PRPF8-204ENST00000572445 NBPF10Q6P3W6 841 aaKnown RBP8.28□□□□□ -1.08
PRPF8-204ENST00000572445 NBPF15Q8N660 670 aa8.28□□□□□ -1.08
PRPF8-204ENST00000572445 CNKSR1Q969H4 720 aa8.28□□□□□ -1.08
PRPF8-204ENST00000572445 MASTLQ96GX5 879 aa8.28□□□□□ -1.08
PRPF8-204ENST00000572445 ZNF652Q9Y2D9 606 aa8.28□□□□□ -1.08
PRPF8-204ENST00000572445 GJA3Q9Y6H8 435 aa8.28□□□□□ -1.08
PRPF8-204ENST00000572445 ZC3H4Q9UPT8 1303 aaKnown RBP8.28□□□□□ -1.08
PRPF8-204ENST00000572445 ANXA1P04083 346 aa8.27□□□□□ -1.09
PRPF8-204ENST00000572445 SNRPA1P09661 255 aaKnown RBP8.27□□□□□ -1.09
PRPF8-204ENST00000572445 FBXO45P0C2W1 286 aa8.27□□□□□ -1.09
PRPF8-204ENST00000572445 SRGNP10124 158 aa8.27□□□□□ -1.09
PRPF8-204ENST00000572445 STYK1Q6J9G0 422 aa8.27□□□□□ -1.09
PRPF8-204ENST00000572445 B4GALNT3Q6L9W6 998 aa8.27□□□□□ -1.09
PRPF8-204ENST00000572445 TEX13AQ9BXU3 409 aaPredicted RBP8.27□□□□□ -1.09
PRPF8-204ENST00000572445 ANKRD36CQ5JPF3 1778 aa8.27□□□□□ -1.09
PRPF8-204ENST00000572445 COL4A5P29400 1685 aa8.27□□□□□ -1.09
PRPF8-204ENST00000572445 LTBP1Q14766 1721 aa8.26□□□□□ -1.09
PRPF8-204ENST00000572445 USP17L3A6NCW0 530 aa8.26□□□□□ -1.09
PRPF8-204ENST00000572445 USP17L4A6NCW7 530 aa8.26□□□□□ -1.09
PRPF8-204ENST00000572445 NEFMP07197 916 aa8.26□□□□□ -1.09
PRPF8-204ENST00000572445 DOK7Q18PE1 504 aa8.26□□□□□ -1.09
PRPF8-204ENST00000572445 MAP1SQ66K74 1059 aaPredicted RBP8.26□□□□□ -1.09
PRPF8-204ENST00000572445 USP17L2Q6R6M4 530 aa8.26□□□□□ -1.09
PRPF8-204ENST00000572445 KIF6Q6ZMV9 814 aa8.26□□□□□ -1.09
PRPF8-204ENST00000572445 TTLL7Q6ZT98 887 aa8.26□□□□□ -1.09
PRPF8-204ENST00000572445 USP17L1Q7RTZ2 530 aa8.26□□□□□ -1.09
PRPF8-204ENST00000572445 JMYQ8N9B5 988 aa8.26□□□□□ -1.09
PRPF8-204ENST00000572445 RPGRQ92834 1020 aaKnown RBP8.26□□□□□ -1.09
PRPF8-204ENST00000572445 MAPK8IP3Q9UPT6 1336 aa8.26□□□□□ -1.09
PRPF8-204ENST00000572445 NPC1L1Q9UHC9 1359 aa8.25□□□□□ -1.09
PRPF8-204ENST00000572445 NPR1P16066 1061 aa8.25□□□□□ -1.09
PRPF8-204ENST00000572445 EIF2S2P20042 333 aaKnown RBP8.25□□□□□ -1.09
PRPF8-204ENST00000572445 FMR1Q06787 632 aaKnown RBP eCLIP8.25□□□□□ -1.092e-9■■■■■ 31.7
PRPF8-204ENST00000572445 NR1H3Q13133 447 aa8.25□□□□□ -1.09
PRPF8-204ENST00000572445 CRTC2Q53ET0 693 aaPredicted RBP8.25□□□□□ -1.09
PRPF8-204ENST00000572445 FAM174AQ8TBP5 190 aa8.25□□□□□ -1.09
PRPF8-204ENST00000572445 KIAA1468Q9P260 1216 aa8.25□□□□□ -1.09
PRPF8-204ENST00000572445 ABT1Q9ULW3 272 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms