RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 CAVIN4Q5BKX8 364 aa11.62□□□□□ -0.55
NPLOC4-208ENST00000572351 GORABQ5T7V8 394 aa11.62□□□□□ -0.55
NPLOC4-208ENST00000572351 ANKRD45Q5TZF3 282 aa11.62□□□□□ -0.55
NPLOC4-208ENST00000572351 AACSQ86V21 672 aa11.62□□□□□ -0.55
NPLOC4-208ENST00000572351 VPS37DQ86XT2 251 aa11.62□□□□□ -0.55
NPLOC4-208ENST00000572351 RTFDC1Q9BY42 306 aaPredicted RBP11.62□□□□□ -0.55
NPLOC4-208ENST00000572351 ZNF277Q9NRM2 450 aaPredicted RBP11.62□□□□□ -0.55
NPLOC4-208ENST00000572351 FPGT-TNNI3KV9GXZ4 949 aa11.62□□□□□ -0.55
NPLOC4-208ENST00000572351 KIAA1551Q9HCM1 1747 aa11.62□□□□□ -0.55
NPLOC4-208ENST00000572351 SMARCA5O60264 1052 aaPredicted RBP11.61□□□□□ -0.55
NPLOC4-208ENST00000572351 IARSP41252 1262 aaKnown RBP11.61□□□□□ -0.55
NPLOC4-208ENST00000572351 TIMM10P62072 90 aa11.61□□□□□ -0.55
NPLOC4-208ENST00000572351 CENPQQ7L2Z9 268 aaPredicted RBP11.61□□□□□ -0.55
NPLOC4-208ENST00000572351 SMC5Q8IY18 1101 aa11.61□□□□□ -0.55
NPLOC4-208ENST00000572351 LARGE2Q8N3Y3 721 aa11.61□□□□□ -0.55
NPLOC4-208ENST00000572351 GPR108Q9NPR9 543 aa11.61□□□□□ -0.55
NPLOC4-208ENST00000572351 MED23Q9ULK4 1368 aa11.6□□□□□ -0.55
NPLOC4-208ENST00000572351 WTIPA6NIX2 430 aaPredicted RBP11.6□□□□□ -0.55
NPLOC4-208ENST00000572351 LMNB1P20700 586 aa11.6□□□□□ -0.55
NPLOC4-208ENST00000572351 KLRK1P26718 216 aa11.6□□□□□ -0.55
NPLOC4-208ENST00000572351 KIAA2012Q0VF49 1180 aa11.6□□□□□ -0.55
NPLOC4-208ENST00000572351 AOC3Q16853 763 aa11.6□□□□□ -0.55
NPLOC4-208ENST00000572351 ZNF804AQ7Z570 1209 aa11.6□□□□□ -0.55
NPLOC4-208ENST00000572351 NIM1KQ8IY84 436 aa11.6□□□□□ -0.55
NPLOC4-208ENST00000572351 JDP2Q8WYK2 163 aa11.6□□□□□ -0.55
NPLOC4-208ENST00000572351 LTBP3Q9NS15 1303 aa11.6□□□□□ -0.55
NPLOC4-208ENST00000572351 DLEC1Q9Y238 1755 aa11.59□□□□□ -0.55
NPLOC4-208ENST00000572351 FRAT2O75474 233 aaPredicted RBP11.59□□□□□ -0.55
NPLOC4-208ENST00000572351 FGFR2P21802 821 aa11.59□□□□□ -0.55
NPLOC4-208ENST00000572351 ADORA1P30542 326 aa11.59□□□□□ -0.55
NPLOC4-208ENST00000572351 HIBADHP31937 336 aaKnown RBP11.59□□□□□ -0.55
NPLOC4-208ENST00000572351 GYG1P46976 350 aa11.59□□□□□ -0.55
NPLOC4-208ENST00000572351 DOK7Q18PE1 504 aa11.59□□□□□ -0.55
NPLOC4-208ENST00000572351 CCDC158Q5M9N0 1113 aa11.59□□□□□ -0.55
NPLOC4-208ENST00000572351 EAF2Q96CJ1 260 aaPredicted RBP11.59□□□□□ -0.55
NPLOC4-208ENST00000572351 XAGE2Q96GT9 111 aa11.59□□□□□ -0.55
NPLOC4-208ENST00000572351 GPATCH3Q96I76 525 aa11.59□□□□□ -0.55
NPLOC4-208ENST00000572351 LNPKQ9C0E8 428 aa11.59□□□□□ -0.55
NPLOC4-208ENST00000572351 CCDC8Q9H0W5 538 aaPredicted RBP11.59□□□□□ -0.55
NPLOC4-208ENST00000572351 VPS33BQ9H267 617 aa11.59□□□□□ -0.55
NPLOC4-208ENST00000572351 GNL3LQ9NVN8 582 aaKnown RBP11.59□□□□□ -0.55
NPLOC4-208ENST00000572351 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.59□□□□□ -0.55
NPLOC4-208ENST00000572351 ZNF609O15014 1411 aa11.59□□□□□ -0.55
NPLOC4-208ENST00000572351 SNED1Q8TER0 1413 aa11.59□□□□□ -0.55
NPLOC4-208ENST00000572351 SLX4Q8IY92 1834 aa11.58□□□□□ -0.56
NPLOC4-208ENST00000572351 NUCB1Q02818 461 aa11.58□□□□□ -0.56
NPLOC4-208ENST00000572351 TTC39AQ5SRH9 613 aa11.58□□□□□ -0.56
NPLOC4-208ENST00000572351 CHD1LQ86WJ1 897 aa11.58□□□□□ -0.56
NPLOC4-208ENST00000572351 DBNDD2Q9BQY9 259 aa11.58□□□□□ -0.56
NPLOC4-208ENST00000572351 COA1Q9GZY4 146 aa11.58□□□□□ -0.56
NPLOC4-208ENST00000572351 DBNDD1Q9H9R9 158 aa11.58□□□□□ -0.56
NPLOC4-208ENST00000572351 RNF181Q9P0P0 153 aa11.58□□□□□ -0.56
NPLOC4-208ENST00000572351 DBNLQ9UJU6 430 aaKnown RBP11.58□□□□□ -0.56
NPLOC4-208ENST00000572351 GTF3C3Q9Y5Q9 886 aa11.58□□□□□ -0.56
NPLOC4-208ENST00000572351 MYH3P11055 1940 aa11.58□□□□□ -0.56
NPLOC4-208ENST00000572351 ECE2O60344 883 aa11.57□□□□□ -0.56
NPLOC4-208ENST00000572351 BCAMP50895 628 aa11.57□□□□□ -0.56
NPLOC4-208ENST00000572351 C9orf131Q5VYM1 1079 aa11.57□□□□□ -0.56
NPLOC4-208ENST00000572351 C15orf52Q6ZUT6 534 aaKnown RBP11.57□□□□□ -0.56
NPLOC4-208ENST00000572351 TXNRD3Q86VQ6 643 aa11.57□□□□□ -0.56
NPLOC4-208ENST00000572351 FBXW7Q969H0 707 aa11.57□□□□□ -0.56
NPLOC4-208ENST00000572351 FAM84BQ96KN1 310 aaPredicted RBP11.57□□□□□ -0.56
NPLOC4-208ENST00000572351 TLR7Q9NYK1 1049 aaKnown RBP11.57□□□□□ -0.56
NPLOC4-208ENST00000572351 KDM2BQ8NHM5 1336 aa11.57□□□□□ -0.56
NPLOC4-208ENST00000572351 LRRC37AA6NMS7 1700 aa11.56□□□□□ -0.56
NPLOC4-208ENST00000572351 CCDC102BQ68D86 513 aa11.56□□□□□ -0.56
NPLOC4-208ENST00000572351 PODNQ7Z5L7 613 aa11.56□□□□□ -0.56
NPLOC4-208ENST00000572351 FBXO33Q7Z6M2 555 aa11.56□□□□□ -0.56
NPLOC4-208ENST00000572351 CD209Q9NNX6 404 aa11.56□□□□□ -0.56
NPLOC4-208ENST00000572351 ZNRF3Q9ULT6 936 aa11.56□□□□□ -0.56
NPLOC4-208ENST00000572351 DUOX1Q9NRD9 1551 aa11.55□□□□□ -0.56
NPLOC4-208ENST00000572351 UQCRFS1P1P0C7P4 283 aa11.55□□□□□ -0.56
NPLOC4-208ENST00000572351 PHKA1P46020 1223 aa11.55□□□□□ -0.56
NPLOC4-208ENST00000572351 EIF6P56537 245 aaKnown RBP11.55□□□□□ -0.56
NPLOC4-208ENST00000572351 CHAF1AQ13111 956 aaPredicted RBP11.55□□□□□ -0.56
NPLOC4-208ENST00000572351 C16orf71Q8IYS4 520 aaPredicted RBP11.55□□□□□ -0.56
NPLOC4-208ENST00000572351 ECHDC1Q9NTX5 307 aa11.55□□□□□ -0.56
NPLOC4-208ENST00000572351 IQSEC3Q9UPP2 1182 aaPredicted RBP11.55□□□□□ -0.56
NPLOC4-208ENST00000572351 IRS2Q9Y4H2 1338 aa11.55□□□□□ -0.56
NPLOC4-208ENST00000572351 MX1P20591 662 aa11.54□□□□□ -0.56
NPLOC4-208ENST00000572351 PRELPP51888 382 aa11.54□□□□□ -0.56
NPLOC4-208ENST00000572351 OTUD7AQ8TE49 926 aaPredicted RBP11.54□□□□□ -0.56
NPLOC4-208ENST00000572351 DENND2AQ9ULE3 1009 aa11.54□□□□□ -0.56
NPLOC4-208ENST00000572351 JAG2Q9Y219 1238 aa11.54□□□□□ -0.56
NPLOC4-208ENST00000572351 SRCAPQ6ZRS2 3230 aa11.54□□□□□ -0.56
NPLOC4-208ENST00000572351 TAF1P21675 1872 aa11.53□□□□□ -0.56
NPLOC4-208ENST00000572351 SEMA3EO15041 775 aa11.53□□□□□ -0.56
NPLOC4-208ENST00000572351 ERC2O15083 957 aa11.53□□□□□ -0.56
NPLOC4-208ENST00000572351 RAD17O75943 681 aa11.53□□□□□ -0.56
NPLOC4-208ENST00000572351 IL1R1P14778 569 aa11.53□□□□□ -0.56
NPLOC4-208ENST00000572351 GTF2IP78347 998 aa11.53□□□□□ -0.56
NPLOC4-208ENST00000572351 TSHZ3Q63HK5 1081 aa11.53□□□□□ -0.56
NPLOC4-208ENST00000572351 TDRD7Q8NHU6 1098 aaKnown RBP11.53□□□□□ -0.56
NPLOC4-208ENST00000572351 BRCA1P38398 1863 aaKnown RBP11.53□□□□□ -0.56
NPLOC4-208ENST00000572351 SPEF2Q9C093 1822 aa11.52□□□□□ -0.57
NPLOC4-208ENST00000572351 USP17L3A6NCW0 530 aa11.52□□□□□ -0.57
NPLOC4-208ENST00000572351 USP17L4A6NCW7 530 aa11.52□□□□□ -0.57
NPLOC4-208ENST00000572351 YDJCA8MPS7 323 aa11.52□□□□□ -0.57
NPLOC4-208ENST00000572351 FZD9O00144 591 aa11.52□□□□□ -0.57
NPLOC4-208ENST00000572351 CAPN15O75808 1086 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms