RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 TRPM7Q96QT4 1865 aa17.35■□□□□ 0.37
RPAIN-211ENST00000572174 USP17L3A6NCW0 530 aa17.35■□□□□ 0.37
RPAIN-211ENST00000572174 USP17L4A6NCW7 530 aa17.35■□□□□ 0.37
RPAIN-211ENST00000572174 PSMD14O00487 310 aa17.35■□□□□ 0.37
RPAIN-211ENST00000572174 TAF5LO75529 589 aa17.35■□□□□ 0.37
RPAIN-211ENST00000572174 GMPSP49915 693 aaPredicted RBP17.35■□□□□ 0.37
RPAIN-211ENST00000572174 USP17L1Q7RTZ2 530 aa17.35■□□□□ 0.37
RPAIN-211ENST00000572174 AGBL3Q8NEM8 1001 aa17.35■□□□□ 0.37
RPAIN-211ENST00000572174 YTHDC1Q96MU7 727 aaKnown RBP17.35■□□□□ 0.37
RPAIN-211ENST00000572174 GPR101Q96P66 508 aaPredicted RBP17.35■□□□□ 0.37
RPAIN-211ENST00000572174 ADARB2Q9NS39 739 aaKnown RBP17.35■□□□□ 0.37
RPAIN-211ENST00000572174 DDX19BQ9UMR2 479 aa17.35■□□□□ 0.37
RPAIN-211ENST00000572174 SRGAP3O43295 1099 aa17.34■□□□□ 0.37
RPAIN-211ENST00000572174 PLIN1O60240 522 aa17.34■□□□□ 0.37
RPAIN-211ENST00000572174 PDE8BO95263 885 aa17.34■□□□□ 0.37
RPAIN-211ENST00000572174 VIL1P09327 827 aaKnown RBP17.34■□□□□ 0.37
RPAIN-211ENST00000572174 IFIT1P09914 478 aaKnown RBP17.34■□□□□ 0.37
RPAIN-211ENST00000572174 PTPN12Q05209 780 aaKnown RBP17.34■□□□□ 0.37
RPAIN-211ENST00000572174 PDE3AQ14432 1141 aa17.34■□□□□ 0.37
RPAIN-211ENST00000572174 PUM3Q15397 648 aaKnown RBP17.34■□□□□ 0.37
RPAIN-211ENST00000572174 CAVIN4Q5BKX8 364 aa17.34■□□□□ 0.37
RPAIN-211ENST00000572174 CHADLQ6NUI6 762 aa17.34■□□□□ 0.37
RPAIN-211ENST00000572174 HELBQ8NG08 1087 aaPredicted RBP17.34■□□□□ 0.37
RPAIN-211ENST00000572174 COPRSQ9NQ92 184 aa17.34■□□□□ 0.37
RPAIN-211ENST00000572174 ECM29Q5VYK3 1845 aa17.33■□□□□ 0.37
RPAIN-211ENST00000572174 IL15P40933 162 aaPredicted RBP17.33■□□□□ 0.36
RPAIN-211ENST00000572174 RFX5P48382 616 aaPredicted RBP17.33■□□□□ 0.36
RPAIN-211ENST00000572174 EAPPQ56P03 285 aaPredicted RBP17.33■□□□□ 0.36
RPAIN-211ENST00000572174 STRIP1Q5VSL9 837 aa17.33■□□□□ 0.36
RPAIN-211ENST00000572174 RSBN1LQ6PCB5 846 aaPredicted RBP17.33■□□□□ 0.36
RPAIN-211ENST00000572174 VPS37DQ86XT2 251 aa17.33■□□□□ 0.36
RPAIN-211ENST00000572174 TNNQ9UQP3 1299 aa17.33■□□□□ 0.36
RPAIN-211ENST00000572174 RLBP1P12271 317 aa17.32■□□□□ 0.36
RPAIN-211ENST00000572174 SLC5A1P13866 664 aa17.32■□□□□ 0.36
RPAIN-211ENST00000572174 MVPQ14764 893 aaKnown RBP17.32■□□□□ 0.36
RPAIN-211ENST00000572174 LRRC24Q50LG9 513 aa17.32■□□□□ 0.36
RPAIN-211ENST00000572174 PUS3Q9BZE2 481 aaKnown RBP17.32■□□□□ 0.36
RPAIN-211ENST00000572174 CD209Q9NNX6 404 aa17.32■□□□□ 0.36
RPAIN-211ENST00000572174 CEP126Q9P2H0 1117 aa17.32■□□□□ 0.36
RPAIN-211ENST00000572174 CNOT7Q9UIV1 285 aaKnown RBP17.32■□□□□ 0.36
RPAIN-211ENST00000572174 HSPA6P17066 643 aa17.31■□□□□ 0.36
RPAIN-211ENST00000572174 MICALL2Q8IY33 904 aa17.31■□□□□ 0.36
RPAIN-211ENST00000572174 VGLL2Q8N8G2 317 aa17.31■□□□□ 0.36
RPAIN-211ENST00000572174 CLEC11AQ9Y240 323 aa17.31■□□□□ 0.36
RPAIN-211ENST00000572174 POLR2AP24928 1970 aaKnown RBP17.31■□□□□ 0.36
RPAIN-211ENST00000572174 ZBTB7BO15156 539 aaPredicted RBP17.3■□□□□ 0.36
RPAIN-211ENST00000572174 IL1R1P14778 569 aa17.3■□□□□ 0.36
RPAIN-211ENST00000572174 HIBADHP31937 336 aaKnown RBP17.3■□□□□ 0.36
RPAIN-211ENST00000572174 EPS15P42566 896 aa17.3■□□□□ 0.36
RPAIN-211ENST00000572174 APLP1P51693 650 aa17.3■□□□□ 0.36
RPAIN-211ENST00000572174 TTLL5Q6EMB2 1281 aa17.3■□□□□ 0.36
RPAIN-211ENST00000572174 OGFOD1Q8N543 542 aa17.3■□□□□ 0.36
RPAIN-211ENST00000572174 KLHDC4Q8TBB5 520 aa17.3■□□□□ 0.36
RPAIN-211ENST00000572174 PANK1Q8TE04 598 aa17.3■□□□□ 0.36
RPAIN-211ENST00000572174 ZC3H15Q8WU90 426 aaKnown RBP17.3■□□□□ 0.36
RPAIN-211ENST00000572174 LPIN2Q92539 896 aa17.3■□□□□ 0.36
RPAIN-211ENST00000572174 FBXW7Q969H0 707 aa17.3■□□□□ 0.36
RPAIN-211ENST00000572174 SIL1Q9H173 461 aa17.3■□□□□ 0.36
RPAIN-211ENST00000572174 AKAP2Q9Y2D5 859 aa17.3■□□□□ 0.36
RPAIN-211ENST00000572174 IRS2Q9Y4H2 1338 aa17.29■□□□□ 0.36
RPAIN-211ENST00000572174 FKBP1AP62942 108 aaKnown RBP17.29■□□□□ 0.36
RPAIN-211ENST00000572174 TXNRD3Q86VQ6 643 aa17.29■□□□□ 0.36
RPAIN-211ENST00000572174 HDAC9Q9UKV0 1011 aa17.29■□□□□ 0.36
RPAIN-211ENST00000572174 USP17L8P0C7I0 530 aa17.28■□□□□ 0.36
RPAIN-211ENST00000572174 KLRK1P26718 216 aa17.28■□□□□ 0.36
RPAIN-211ENST00000572174 G3BP1Q13283 466 aaKnown RBP eCLIP17.28■□□□□ 0.36
RPAIN-211ENST00000572174 ATG9AQ7Z3C6 839 aa17.28■□□□□ 0.36
RPAIN-211ENST00000572174 HMMRO75330 724 aa17.27■□□□□ 0.36
RPAIN-211ENST00000572174 FRAT2O75474 233 aaPredicted RBP17.27■□□□□ 0.36
RPAIN-211ENST00000572174 ATP8B2P98198 1209 aa17.27■□□□□ 0.36
RPAIN-211ENST00000572174 ATP2B3Q16720 1220 aa17.27■□□□□ 0.36
RPAIN-211ENST00000572174 DACT2Q5SW24 774 aa17.27■□□□□ 0.36
RPAIN-211ENST00000572174 GNL3LQ9NVN8 582 aaKnown RBP17.27■□□□□ 0.36
RPAIN-211ENST00000572174 ZBTB12Q9Y330 459 aaPredicted RBP17.27■□□□□ 0.36
RPAIN-211ENST00000572174 WTIPA6NIX2 430 aaPredicted RBP17.26■□□□□ 0.35
RPAIN-211ENST00000572174 SASH1O94885 1247 aa17.26■□□□□ 0.35
RPAIN-211ENST00000572174 FGFR2P21802 821 aa17.26■□□□□ 0.35
RPAIN-211ENST00000572174 ZNF280AP59817 542 aaPredicted RBP17.26■□□□□ 0.35
RPAIN-211ENST00000572174 GTF2IP78347 998 aa17.26■□□□□ 0.35
RPAIN-211ENST00000572174 KIF4BQ2VIQ3 1234 aa17.26■□□□□ 0.35
RPAIN-211ENST00000572174 SSH3Q8TE77 659 aa17.26■□□□□ 0.35
RPAIN-211ENST00000572174 TBC1D22AQ8WUA7 517 aa17.26■□□□□ 0.35
RPAIN-211ENST00000572174 KCNQ5Q9NR82 932 aa17.26■□□□□ 0.35
RPAIN-211ENST00000572174 PA2G4Q9UQ80 394 aaKnown RBP17.26■□□□□ 0.35
RPAIN-211ENST00000572174 COG6Q9Y2V7 657 aa17.26■□□□□ 0.35
RPAIN-211ENST00000572174 SNAP23O00161 211 aa17.25■□□□□ 0.35
RPAIN-211ENST00000572174 GYG1P46976 350 aa17.25■□□□□ 0.35
RPAIN-211ENST00000572174 OS9Q13438 667 aaPredicted RBP17.25■□□□□ 0.35
RPAIN-211ENST00000572174 POLA2Q14181 598 aa17.25■□□□□ 0.35
RPAIN-211ENST00000572174 HSP90AB4PQ58FF6 505 aa17.25■□□□□ 0.35
RPAIN-211ENST00000572174 FBXO33Q7Z6M2 555 aa17.25■□□□□ 0.35
RPAIN-211ENST00000572174 RPAP2Q8IXW5 612 aaPredicted RBP17.25■□□□□ 0.35
RPAIN-211ENST00000572174 TDRD7Q8NHU6 1098 aaKnown RBP17.25■□□□□ 0.35
RPAIN-211ENST00000572174 FAM84BQ96KN1 310 aaPredicted RBP17.25■□□□□ 0.35
RPAIN-211ENST00000572174 GMLQ99445 158 aa17.25■□□□□ 0.35
RPAIN-211ENST00000572174 FAM205AQ6ZU69 1335 aa17.24■□□□□ 0.35
RPAIN-211ENST00000572174 PNMA6EA0A0J9YXQ4 647 aa17.24■□□□□ 0.35
RPAIN-211ENST00000572174 CNTROBQ8N137 903 aa17.24■□□□□ 0.35
RPAIN-211ENST00000572174 PGAP2Q9UHJ9 254 aa17.24■□□□□ 0.35
RPAIN-211ENST00000572174 SEMA3EO15041 775 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms