RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 KLRK1P26718 216 aa24.76■■□□□ 1.55
NUP88-203ENST00000572019 CWF19L2Q2TBE0 894 aaKnown RBP24.76■■□□□ 1.55
NUP88-203ENST00000572019 PODNQ7Z5L7 613 aa24.76■■□□□ 1.55
NUP88-203ENST00000572019 MED23Q9ULK4 1368 aa24.76■■□□□ 1.55
NUP88-203ENST00000572019 PI4KAP2A4QPH2 592 aa24.75■■□□□ 1.55
NUP88-203ENST00000572019 TBC1D8O95759 1140 aa24.75■■□□□ 1.55
NUP88-203ENST00000572019 HSP90B1P14625 803 aaKnown RBP24.75■■□□□ 1.55
NUP88-203ENST00000572019 PI4KAP1Q8N8J0 262 aa24.75■■□□□ 1.55
NUP88-203ENST00000572019 PRKRIP1Q9H875 184 aaPredicted RBP24.75■■□□□ 1.55
NUP88-203ENST00000572019 SASH1O94885 1247 aa24.74■■□□□ 1.55
NUP88-203ENST00000572019 FKBP1BP68106 108 aa24.74■■□□□ 1.55
NUP88-203ENST00000572019 MKRN3Q13064 507 aaKnown RBP24.74■■□□□ 1.55
NUP88-203ENST00000572019 G2E3Q7L622 706 aa24.74■■□□□ 1.55
NUP88-203ENST00000572019 TSR2Q969E8 191 aaKnown RBP24.74■■□□□ 1.55
NUP88-203ENST00000572019 A0A1B0GUL6 1792 aa24.73■■□□□ 1.55
NUP88-203ENST00000572019 WNT10BO00744 389 aa24.73■■□□□ 1.55
NUP88-203ENST00000572019 CCDC30Q5VVM6 783 aa24.73■■□□□ 1.55
NUP88-203ENST00000572019 KSR2Q6VAB6 950 aa24.73■■□□□ 1.55
NUP88-203ENST00000572019 FBXW7Q969H0 707 aa24.73■■□□□ 1.55
NUP88-203ENST00000572019 CDC5LQ99459 802 aaKnown RBP24.73■■□□□ 1.55
NUP88-203ENST00000572019 BSDC1Q9NW68 430 aaPredicted RBP24.73■■□□□ 1.55
NUP88-203ENST00000572019 DDX58O95786 925 aaKnown RBP24.72■■□□□ 1.55
NUP88-203ENST00000572019 CCT4P50991 539 aaKnown RBP24.72■■□□□ 1.55
NUP88-203ENST00000572019 ZNF296Q8WUU4 475 aaPredicted RBP24.72■■□□□ 1.55
NUP88-203ENST00000572019 HPS5Q9UPZ3 1129 aa24.72■■□□□ 1.55
NUP88-203ENST00000572019 R3HDMLQ9H3Y0 253 aa24.71■■□□□ 1.55
NUP88-203ENST00000572019 FZD1Q9UP38 647 aa24.71■■□□□ 1.55
NUP88-203ENST00000572019 NEURL1BA8MQ27 555 aa24.7■■□□□ 1.54
NUP88-203ENST00000572019 PRKG1Q13976 671 aa24.69■■□□□ 1.54
NUP88-203ENST00000572019 TTLL12Q14166 644 aaPredicted RBP24.69■■□□□ 1.54
NUP88-203ENST00000572019 UBE3BQ7Z3V4 1068 aa24.69■■□□□ 1.54
NUP88-203ENST00000572019 PTPN12Q05209 780 aaKnown RBP24.68■■□□□ 1.54
NUP88-203ENST00000572019 REM2Q8IYK8 340 aaPredicted RBP24.68■■□□□ 1.54
NUP88-203ENST00000572019 H7C1W4 665 aa24.67■■□□□ 1.54
NUP88-203ENST00000572019 SNAP23O00161 211 aa24.67■■□□□ 1.54
NUP88-203ENST00000572019 CALD1Q05682 793 aaKnown RBP24.67■■□□□ 1.54
NUP88-203ENST00000572019 CCDC184Q52MB2 194 aa24.67■■□□□ 1.54
NUP88-203ENST00000572019 STRIP1Q5VSL9 837 aa24.67■■□□□ 1.54
NUP88-203ENST00000572019 KIAA0825Q8IV33 1275 aa24.67■■□□□ 1.54
NUP88-203ENST00000572019 COA1Q9GZY4 146 aa24.67■■□□□ 1.54
NUP88-203ENST00000572019 ECM29Q5VYK3 1845 aa24.67■■□□□ 1.54
NUP88-203ENST00000572019 TM4SF4P48230 202 aa24.66■■□□□ 1.54
NUP88-203ENST00000572019 CASP7P55210 303 aa24.66■■□□□ 1.54
NUP88-203ENST00000572019 ZBED3Q96IU2 234 aaPredicted RBP24.66■■□□□ 1.54
NUP88-203ENST00000572019 PCDHAC2Q9Y5I4 1007 aa24.66■■□□□ 1.54
NUP88-203ENST00000572019 ZNF804BA4D1E1 1349 aa24.64■■□□□ 1.54
NUP88-203ENST00000572019 SSC5DA1L4H1 1573 aa24.64■■□□□ 1.54
NUP88-203ENST00000572019 GPR25O00155 361 aa24.64■■□□□ 1.54
NUP88-203ENST00000572019 ITGA6P23229 1130 aa24.64■■□□□ 1.54
NUP88-203ENST00000572019 TTLL5Q6EMB2 1281 aa24.64■■□□□ 1.54
NUP88-203ENST00000572019 OGFOD1Q8N543 542 aa24.64■■□□□ 1.54
NUP88-203ENST00000572019 HDAC9Q9UKV0 1011 aa24.64■■□□□ 1.54
NUP88-203ENST00000572019 IRS2Q9Y4H2 1338 aa24.63■■□□□ 1.53
NUP88-203ENST00000572019 GTF2IP78347 998 aa24.63■■□□□ 1.53
NUP88-203ENST00000572019 CERS5Q8N5B7 392 aa24.63■■□□□ 1.53
NUP88-203ENST00000572019 LEMD3Q9Y2U8 911 aa24.63■■□□□ 1.53
NUP88-203ENST00000572019 AOX1Q06278 1338 aa24.62■■□□□ 1.53
NUP88-203ENST00000572019 MYO3BQ8WXR4 1341 aa24.62■■□□□ 1.53
NUP88-203ENST00000572019 LAMB1P07942 1786 aa24.62■■□□□ 1.53
NUP88-203ENST00000572019 NEXNQ0ZGT2 675 aa24.62■■□□□ 1.53
NUP88-203ENST00000572019 GCKRQ14397 625 aa24.62■■□□□ 1.53
NUP88-203ENST00000572019 IGHMBP2P38935 993 aaKnown RBP24.61■■□□□ 1.53
NUP88-203ENST00000572019 LDLRAD1Q5T700 205 aa24.61■■□□□ 1.53
NUP88-203ENST00000572019 PLA2G12BQ9BX93 195 aa24.61■■□□□ 1.53
NUP88-203ENST00000572019 SLC4A2P04920 1241 aa24.6■■□□□ 1.53
NUP88-203ENST00000572019 CHRNDQ07001 517 aa24.6■■□□□ 1.53
NUP88-203ENST00000572019 TWISTNBQ3B726 338 aaPredicted RBP24.6■■□□□ 1.53
NUP88-203ENST00000572019 STK31Q9BXU1 1019 aa24.6■■□□□ 1.53
NUP88-203ENST00000572019 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.6■■□□□ 1.53
NUP88-203ENST00000572019 ANGEL1Q9UNK9 670 aaKnown RBP24.6■■□□□ 1.53
NUP88-203ENST00000572019 CACNA1FO60840 1977 aa24.6■■□□□ 1.53
NUP88-203ENST00000572019 HTTP42858 3142 aa24.59■■□□□ 1.53
NUP88-203ENST00000572019 CSF1RP07333 972 aa24.59■■□□□ 1.53
NUP88-203ENST00000572019 NF2P35240 595 aa24.59■■□□□ 1.53
NUP88-203ENST00000572019 SPRYD7Q5W111 196 aa24.59■■□□□ 1.53
NUP88-203ENST00000572019 HELBQ8NG08 1087 aaPredicted RBP24.59■■□□□ 1.53
NUP88-203ENST00000572019 CLMNQ96JQ2 1002 aa24.59■■□□□ 1.53
NUP88-203ENST00000572019 CD209Q9NNX6 404 aa24.59■■□□□ 1.53
NUP88-203ENST00000572019 TAF5LO75529 589 aa24.58■■□□□ 1.53
NUP88-203ENST00000572019 PKN2Q16513 984 aaKnown RBP24.58■■□□□ 1.53
NUP88-203ENST00000572019 APOBEC3FQ8IUX4 373 aaKnown RBP24.58■■□□□ 1.53
NUP88-203ENST00000572019 OTOFQ9HC10 1997 aa24.58■■□□□ 1.52
NUP88-203ENST00000572019 FLIIQ13045 1269 aa24.57■■□□□ 1.52
NUP88-203ENST00000572019 NOM1Q5C9Z4 860 aaKnown RBP24.57■■□□□ 1.52
NUP88-203ENST00000572019 PRPF38BQ5VTL8 546 aaKnown RBP24.57■■□□□ 1.52
NUP88-203ENST00000572019 ARMC9Q7Z3E5 817 aa24.57■■□□□ 1.52
NUP88-203ENST00000572019 WWC1Q8IX03 1113 aa24.57■■□□□ 1.52
NUP88-203ENST00000572019 MPHOSPH8Q99549 860 aa24.57■■□□□ 1.52
NUP88-203ENST00000572019 FBXO46Q6PJ61 603 aaPredicted RBP24.56■■□□□ 1.52
NUP88-203ENST00000572019 ANKRD2Q9GZV1 360 aa24.56■■□□□ 1.52
NUP88-203ENST00000572019 DEFB129Q9H1M3 183 aa24.56■■□□□ 1.52
NUP88-203ENST00000572019 JAG2Q9Y219 1238 aa24.56■■□□□ 1.52
NUP88-203ENST00000572019 F8W031 263 aaPredicted RBP24.55■■□□□ 1.52
NUP88-203ENST00000572019 FKTNO75072 461 aa24.55■■□□□ 1.52
NUP88-203ENST00000572019 SREBF2Q12772 1141 aa24.55■■□□□ 1.52
NUP88-203ENST00000572019 CFHR5Q9BXR6 569 aa24.55■■□□□ 1.52
NUP88-203ENST00000572019 CLRN2A0PK11 232 aa24.54■■□□□ 1.52
NUP88-203ENST00000572019 KCNJ4P48050 445 aa24.54■■□□□ 1.52
NUP88-203ENST00000572019 FOXO4P98177 505 aa24.54■■□□□ 1.52
NUP88-203ENST00000572019 DNAAF4Q8WXU2 420 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms