RNA–Protein interactions for RNA: ENST00000571945.5

ABR-215, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 4

Gene ABR, Length 760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-215	ENST00000571945	YTHDC1	Q96MU7	727 aa	Known RBP	31.58	■■■□□ 2.65
ABR-215	ENST00000571945	EYA2	O00167	538 aa		31.57	■■■□□ 2.64
ABR-215	ENST00000571945	UBE4A	Q14139	1066 aa		31.57	■■■□□ 2.64
ABR-215	ENST00000571945	LRRC24	Q50LG9	513 aa		31.57	■■■□□ 2.64
ABR-215	ENST00000571945	METTL24	Q5JXM2	366 aa		31.56	■■■□□ 2.64
ABR-215	ENST00000571945	LDHD	Q86WU2	507 aa		31.56	■■■□□ 2.64
ABR-215	ENST00000571945	DPF2	Q92785	391 aa		31.56	■■■□□ 2.64
ABR-215	ENST00000571945	PLIN1	O60240	522 aa		31.55	■■■□□ 2.64
ABR-215	ENST00000571945	CIAO1	O76071	339 aa		31.55	■■■□□ 2.64
ABR-215	ENST00000571945	VIL1	P09327	827 aa	Known RBP	31.55	■■■□□ 2.64
ABR-215	ENST00000571945	VGLL2	Q8N8G2	317 aa		31.55	■■■□□ 2.64
ABR-215	ENST00000571945	SNAP23	O00161	211 aa		31.54	■■■□□ 2.64
ABR-215	ENST00000571945	EPS15	P42566	896 aa		31.54	■■■□□ 2.64
ABR-215	ENST00000571945	COPRS	Q9NQ92	184 aa		31.54	■■■□□ 2.64
ABR-215	ENST00000571945	KCNQ5	Q9NR82	932 aa		31.54	■■■□□ 2.64
ABR-215	ENST00000571945	USP17L3	A6NCW0	530 aa		31.53	■■■□□ 2.64
ABR-215	ENST00000571945	USP17L4	A6NCW7	530 aa		31.53	■■■□□ 2.64
ABR-215	ENST00000571945	SRGAP3	O43295	1099 aa		31.53	■■■□□ 2.64
ABR-215	ENST00000571945	PDE8B	O95263	885 aa		31.53	■■■□□ 2.64
ABR-215	ENST00000571945	USP50	Q70EL3	339 aa	Predicted RBP	31.53	■■■□□ 2.64
ABR-215	ENST00000571945	USP17L1	Q7RTZ2	530 aa		31.53	■■■□□ 2.64
ABR-215	ENST00000571945	ZNF804A	Q7Z570	1209 aa		31.53	■■■□□ 2.64
ABR-215	ENST00000571945	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	31.53	■■■□□ 2.64
ABR-215	ENST00000571945	PANK1	Q8TE04	598 aa		31.53	■■■□□ 2.64
ABR-215	ENST00000571945	ADARB2	Q9NS39	739 aa	Known RBP	31.53	■■■□□ 2.64
ABR-215	ENST00000571945	ZBTB7B	O15156	539 aa	Predicted RBP	31.52	■■■□□ 2.64
ABR-215	ENST00000571945	CHADL	Q6NUI6	762 aa		31.52	■■■□□ 2.64
ABR-215	ENST00000571945	POTEI	P0CG38	1075 aa		31.51	■■■□□ 2.63
ABR-215	ENST00000571945	POTEJ	P0CG39	1038 aa		31.51	■■■□□ 2.63
ABR-215	ENST00000571945	EAPP	Q56P03	285 aa	Predicted RBP	31.51	■■■□□ 2.63
ABR-215	ENST00000571945	RSBN1L	Q6PCB5	846 aa	Predicted RBP	31.51	■■■□□ 2.63
ABR-215	ENST00000571945	AGBL3	Q8NEM8	1001 aa		31.51	■■■□□ 2.63
ABR-215	ENST00000571945	CD209	Q9NNX6	404 aa		31.51	■■■□□ 2.63
ABR-215	ENST00000571945	ZBTB12	Q9Y330	459 aa	Predicted RBP	31.51	■■■□□ 2.63
ABR-215	ENST00000571945	ARAP2	Q8WZ64	1704 aa		31.5	■■■□□ 2.63
ABR-215	ENST00000571945	STRIP1	Q5VSL9	837 aa		31.5	■■■□□ 2.63
ABR-215	ENST00000571945	ATG9A	Q7Z3C6	839 aa		31.5	■■■□□ 2.63
ABR-215	ENST00000571945	MVP	Q14764	893 aa	Known RBP	31.49	■■■□□ 2.63
ABR-215	ENST00000571945	PUM3	Q15397	648 aa	Known RBP	31.49	■■■□□ 2.63
ABR-215	ENST00000571945	MICALL2	Q8IY33	904 aa		31.49	■■■□□ 2.63
ABR-215	ENST00000571945	CNOT7	Q9UIV1	285 aa	Known RBP	31.49	■■■□□ 2.63
ABR-215	ENST00000571945	MYO3B	Q8WXR4	1341 aa		31.49	■■■□□ 2.63
ABR-215	ENST00000571945		H7C1D1	291 aa		31.48	■■■□□ 2.63
ABR-215	ENST00000571945	IL1R1	P14778	569 aa		31.48	■■■□□ 2.63
ABR-215	ENST00000571945	HSPA6	P17066	643 aa		31.48	■■■□□ 2.63
ABR-215	ENST00000571945	IL15	P40933	162 aa	Predicted RBP	31.48	■■■□□ 2.63
ABR-215	ENST00000571945	SIL1	Q9H173	461 aa		31.48	■■■□□ 2.63
ABR-215	ENST00000571945	PDE3A	Q14432	1141 aa		31.47	■■■□□ 2.63
ABR-215	ENST00000571945	DACT2	Q5SW24	774 aa		31.47	■■■□□ 2.63
ABR-215	ENST00000571945	DDX19B	Q9UMR2	479 aa		31.47	■■■□□ 2.63
ABR-215	ENST00000571945	PA2G4	Q9UQ80	394 aa	Known RBP	31.47	■■■□□ 2.63
ABR-215	ENST00000571945	MYH13	Q9UKX3	1938 aa		31.46	■■■□□ 2.63
ABR-215	ENST00000571945	GML	Q99445	158 aa		31.46	■■■□□ 2.63
ABR-215	ENST00000571945	FGFR2	P21802	821 aa		31.45	■■■□□ 2.63
ABR-215	ENST00000571945	PNMA6E	A0A0J9YXQ4	647 aa		31.44	■■■□□ 2.62
ABR-215	ENST00000571945	CEP126	Q9P2H0	1117 aa		31.44	■■■□□ 2.62
ABR-215	ENST00000571945	IFIT1	P09914	478 aa	Known RBP	31.43	■■■□□ 2.62
ABR-215	ENST00000571945	HIBADH	P31937	336 aa	Known RBP	31.43	■■■□□ 2.62
ABR-215	ENST00000571945	CHMP4B	Q9H444	224 aa	Known RBP	31.43	■■■□□ 2.62
ABR-215	ENST00000571945	C1orf115	Q9H7X2	142 aa		31.43	■■■□□ 2.62
ABR-215	ENST00000571945	CLEC11A	Q9Y240	323 aa		31.43	■■■□□ 2.62
ABR-215	ENST00000571945	SLC5A1	P13866	664 aa		31.42	■■■□□ 2.62
ABR-215	ENST00000571945	GYG1	P46976	350 aa		31.42	■■■□□ 2.62
ABR-215	ENST00000571945	ATP8B2	P98198	1209 aa		31.42	■■■□□ 2.62
ABR-215	ENST00000571945	POLA2	Q14181	598 aa		31.42	■■■□□ 2.62
ABR-215	ENST00000571945	TTLL5	Q6EMB2	1281 aa		31.42	■■■□□ 2.62
ABR-215	ENST00000571945	LPIN2	Q92539	896 aa		31.42	■■■□□ 2.62
ABR-215	ENST00000571945	FBXW7	Q969H0	707 aa		31.42	■■■□□ 2.62
ABR-215	ENST00000571945	FAM84B	Q96KN1	310 aa	Predicted RBP	31.42	■■■□□ 2.62
ABR-215	ENST00000571945	COG6	Q9Y2V7	657 aa		31.42	■■■□□ 2.62
ABR-215	ENST00000571945	SHTN1	A0MZ66	631 aa		31.41	■■■□□ 2.62
ABR-215	ENST00000571945	MMP14	P50281	582 aa		31.41	■■■□□ 2.62
ABR-215	ENST00000571945	ZNF280A	P59817	542 aa	Predicted RBP	31.41	■■■□□ 2.62
ABR-215	ENST00000571945	GTF2I	P78347	998 aa		31.41	■■■□□ 2.62
ABR-215	ENST00000571945	CAVIN4	Q5BKX8	364 aa		31.41	■■■□□ 2.62
ABR-215	ENST00000571945	TRPM4	Q8TD43	1214 aa		31.41	■■■□□ 2.62
ABR-215	ENST00000571945	SSH3	Q8TE77	659 aa		31.41	■■■□□ 2.62
ABR-215	ENST00000571945	USP17L8	P0C7I0	530 aa		31.4	■■■□□ 2.62
ABR-215	ENST00000571945	FBXO33	Q7Z6M2	555 aa		31.4	■■■□□ 2.62
ABR-215	ENST00000571945	TDRD7	Q8NHU6	1098 aa	Known RBP	31.4	■■■□□ 2.62
ABR-215	ENST00000571945	ZC3H15	Q8WU90	426 aa	Known RBP	31.4	■■■□□ 2.62
ABR-215	ENST00000571945	FKBP1A	P62942	108 aa	Known RBP	31.39	■■■□□ 2.62
ABR-215	ENST00000571945	ATP2B3	Q16720	1220 aa		31.39	■■■□□ 2.62
ABR-215	ENST00000571945	VPS37D	Q86XT2	251 aa		31.39	■■■□□ 2.62
ABR-215	ENST00000571945	FAM205A	Q6ZU69	1335 aa		31.39	■■■□□ 2.62
ABR-215	ENST00000571945	SASH1	O94885	1247 aa		31.38	■■■□□ 2.61
ABR-215	ENST00000571945	APLP1	P51693	650 aa		31.38	■■■□□ 2.61
ABR-215	ENST00000571945	PGAP2	Q9UHJ9	254 aa		31.38	■■■□□ 2.61
ABR-215	ENST00000571945	HIRA	P54198	1017 aa	Predicted RBP	31.37	■■■□□ 2.61
ABR-215	ENST00000571945	KIF4B	Q2VIQ3	1234 aa		31.37	■■■□□ 2.61
ABR-215	ENST00000571945	CEP85	Q6P2H3	762 aa		31.37	■■■□□ 2.61
ABR-215	ENST00000571945	SAMD7	Q7Z3H4	446 aa		31.37	■■■□□ 2.61
ABR-215	ENST00000571945	PASK	Q96RG2	1323 aa		31.37	■■■□□ 2.61
ABR-215	ENST00000571945	TRPM7	Q96QT4	1865 aa		31.36	■■■□□ 2.61
ABR-215	ENST00000571945	MAP1S	Q66K74	1059 aa	Predicted RBP	31.36	■■■□□ 2.61
ABR-215	ENST00000571945	MXD3	Q9BW11	206 aa		31.36	■■■□□ 2.61
ABR-215	ENST00000571945	ITGBL1	O95965	494 aa	Predicted RBP	31.35	■■■□□ 2.61
ABR-215	ENST00000571945	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	31.35	■■■□□ 2.61
ABR-215	ENST00000571945	C20orf194	Q5TEA3	1177 aa		31.35	■■■□□ 2.61
ABR-215	ENST00000571945	CNTROB	Q8N137	903 aa		31.35	■■■□□ 2.61

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms