RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 IFNKQ9P0W0 207 aa12.84□□□□□ -0.35
PCDHGA4-201ENST00000571252 SSRP1Q08945 709 aaKnown RBP12.83□□□□□ -0.36
PCDHGA4-201ENST00000571252 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.83□□□□□ -0.36
PCDHGA4-201ENST00000571252 CDK5RAP3Q96JB5 506 aa12.83□□□□□ -0.36
PCDHGA4-201ENST00000571252 CLSTN2Q9H4D0 955 aa12.83□□□□□ -0.36
PCDHGA4-201ENST00000571252 OSBPL3Q9H4L5 887 aa12.83□□□□□ -0.36
PCDHGA4-201ENST00000571252 MINDY4BA8MYZ0 360 aa12.83□□□□□ -0.36
PCDHGA4-201ENST00000571252 CDC37L1Q7L3B6 337 aa12.83□□□□□ -0.36
PCDHGA4-201ENST00000571252 BICC1Q9H694 974 aaKnown RBP12.83□□□□□ -0.36
PCDHGA4-201ENST00000571252 ZNF75DP51815 510 aa12.83□□□□□ -0.36
PCDHGA4-201ENST00000571252 IFNL2Q8IZJ0 200 aa12.83□□□□□ -0.36
PCDHGA4-201ENST00000571252 CCDC148Q8NFR7 591 aa12.83□□□□□ -0.36
PCDHGA4-201ENST00000571252 SSH3Q8TE77 659 aa12.83□□□□□ -0.36
PCDHGA4-201ENST00000571252 CCDC12Q8WUD4 166 aaPredicted RBP12.83□□□□□ -0.36
PCDHGA4-201ENST00000571252 RAI14Q9P0K7 980 aa12.83□□□□□ -0.36
PCDHGA4-201ENST00000571252 SSH2Q76I76 1423 aa12.83□□□□□ -0.36
PCDHGA4-201ENST00000571252 DLC1Q96QB1 1528 aa12.83□□□□□ -0.36
PCDHGA4-201ENST00000571252 CRACR2AQ9BSW2 395 aa12.82□□□□□ -0.36
PCDHGA4-201ENST00000571252 TM6SF1Q9BZW5 370 aa12.82□□□□□ -0.36
PCDHGA4-201ENST00000571252 TSPYL1Q9H0U9 437 aa12.82□□□□□ -0.36
PCDHGA4-201ENST00000571252 BCL2L12Q9HB09 334 aa12.82□□□□□ -0.36
PCDHGA4-201ENST00000571252 IKQ13123 557 aaPredicted RBP12.82□□□□□ -0.36
PCDHGA4-201ENST00000571252 TMEM67Q5HYA8 995 aa12.82□□□□□ -0.36
PCDHGA4-201ENST00000571252 KIF2CQ99661 725 aa12.82□□□□□ -0.36
PCDHGA4-201ENST00000571252 ALG1Q9BT22 464 aa12.82□□□□□ -0.36
PCDHGA4-201ENST00000571252 LGR6Q9HBX8 967 aa12.82□□□□□ -0.36
PCDHGA4-201ENST00000571252 ARHGEF10O15013 1369 aa12.82□□□□□ -0.36
PCDHGA4-201ENST00000571252 CUL4AQ13619 759 aa12.82□□□□□ -0.36
PCDHGA4-201ENST00000571252 SYT10Q6XYQ8 523 aa12.82□□□□□ -0.36
PCDHGA4-201ENST00000571252 PLEKHG1Q9ULL1 1385 aa12.82□□□□□ -0.36
PCDHGA4-201ENST00000571252 BABAM1Q9NWV8 329 aa12.82□□□□□ -0.36
PCDHGA4-201ENST00000571252 FAM160A1Q05DH4 1040 aa12.81□□□□□ -0.36
PCDHGA4-201ENST00000571252 MAP3K12Q12852 859 aa12.81□□□□□ -0.36
PCDHGA4-201ENST00000571252 ME3Q16798 604 aa12.81□□□□□ -0.36
PCDHGA4-201ENST00000571252 LDHAL6AQ6ZMR3 332 aa12.81□□□□□ -0.36
PCDHGA4-201ENST00000571252 TIGD1Q96MW7 591 aa12.81□□□□□ -0.36
PCDHGA4-201ENST00000571252 SLC26A6Q9BXS9 759 aa12.81□□□□□ -0.36
PCDHGA4-201ENST00000571252 ARFGAP3Q9NP61 516 aa12.81□□□□□ -0.36
PCDHGA4-201ENST00000571252 MTMR6Q9Y217 621 aa12.81□□□□□ -0.36
PCDHGA4-201ENST00000571252 A0A1B0GVL5 298 aa12.81□□□□□ -0.36
PCDHGA4-201ENST00000571252 UNC5CLQ8IV45 518 aa12.81□□□□□ -0.36
PCDHGA4-201ENST00000571252 PAG1Q9NWQ8 432 aa12.81□□□□□ -0.36
PCDHGA4-201ENST00000571252 TUBB4AP04350 444 aa12.81□□□□□ -0.36
PCDHGA4-201ENST00000571252 RGS12O14924 1447 aa12.81□□□□□ -0.36
PCDHGA4-201ENST00000571252 STARD3NLO95772 234 aa12.8□□□□□ -0.36
PCDHGA4-201ENST00000571252 ZFYP08048 801 aaPredicted RBP12.8□□□□□ -0.36
PCDHGA4-201ENST00000571252 LIG1P18858 919 aa12.8□□□□□ -0.36
PCDHGA4-201ENST00000571252 TFCP2Q12800 502 aa12.8□□□□□ -0.36
PCDHGA4-201ENST00000571252 IQCEQ6IPM2 695 aa12.8□□□□□ -0.36
PCDHGA4-201ENST00000571252 KLHDC4Q8TBB5 520 aa12.8□□□□□ -0.36
PCDHGA4-201ENST00000571252 NUP88Q99567 741 aaPredicted RBP12.8□□□□□ -0.36
PCDHGA4-201ENST00000571252 IGSF1Q8N6C5 1336 aa12.8□□□□□ -0.36
PCDHGA4-201ENST00000571252 PRC1O43663 620 aa12.8□□□□□ -0.36
PCDHGA4-201ENST00000571252 LMAN1P49257 510 aa12.8□□□□□ -0.36
PCDHGA4-201ENST00000571252 LUC7LQ9NQ29 371 aaKnown RBP12.8□□□□□ -0.36
PCDHGA4-201ENST00000571252 DDX21Q9NR30 783 aaKnown RBP eCLIP12.8□□□□□ -0.36
PCDHGA4-201ENST00000571252 NSFL1CQ9UNZ2 370 aaKnown RBP12.8□□□□□ -0.36
PCDHGA4-201ENST00000571252 IL15P40933 162 aaPredicted RBP12.8□□□□□ -0.36
PCDHGA4-201ENST00000571252 NBPF6Q5VWK0 638 aa12.8□□□□□ -0.36
PCDHGA4-201ENST00000571252 RASEFQ8IZ41 740 aa12.8□□□□□ -0.36
PCDHGA4-201ENST00000571252 ERO1AQ96HE7 468 aa12.8□□□□□ -0.36
PCDHGA4-201ENST00000571252 NBPF4Q96M43 638 aa12.8□□□□□ -0.36
PCDHGA4-201ENST00000571252 SRRTQ9BXP5 876 aaKnown RBP12.8□□□□□ -0.36
PCDHGA4-201ENST00000571252 TANGO6Q9C0B7 1094 aa12.8□□□□□ -0.36
PCDHGA4-201ENST00000571252 STAP2Q9UGK3 403 aa12.8□□□□□ -0.36
PCDHGA4-201ENST00000571252 ZBTB43O43298 467 aa12.79□□□□□ -0.36
PCDHGA4-201ENST00000571252 HOXB7P09629 217 aa12.79□□□□□ -0.36
PCDHGA4-201ENST00000571252 PTH1RQ03431 593 aa12.79□□□□□ -0.36
PCDHGA4-201ENST00000571252 ATL3Q6DD88 541 aa12.79□□□□□ -0.36
PCDHGA4-201ENST00000571252 CCDC129Q6ZRS4 1044 aa12.79□□□□□ -0.36
PCDHGA4-201ENST00000571252 CDC42BPGQ6DT37 1551 aa12.79□□□□□ -0.36
PCDHGA4-201ENST00000571252 KIF20BQ96Q89 1820 aa12.79□□□□□ -0.36
PCDHGA4-201ENST00000571252 PATL2C9JE40 543 aaKnown RBP12.79□□□□□ -0.36
PCDHGA4-201ENST00000571252 JAK2O60674 1132 aa12.79□□□□□ -0.36
PCDHGA4-201ENST00000571252 KCNQ3O43525 872 aa12.79□□□□□ -0.36
PCDHGA4-201ENST00000571252 MAP9Q49MG5 647 aa12.79□□□□□ -0.36
PCDHGA4-201ENST00000571252 TTC6Q86TZ1 520 aa12.79□□□□□ -0.36
PCDHGA4-201ENST00000571252 KIAA0754O94854 1291 aa12.78□□□□□ -0.36
PCDHGA4-201ENST00000571252 KANK3Q6NY19 840 aa12.78□□□□□ -0.36
PCDHGA4-201ENST00000571252 AGLP35573 1532 aa12.78□□□□□ -0.36
PCDHGA4-201ENST00000571252 GPTP24298 496 aa12.78□□□□□ -0.36
PCDHGA4-201ENST00000571252 LRMPQ12912 555 aa12.78□□□□□ -0.36
PCDHGA4-201ENST00000571252 KIF20AO95235 890 aa12.78□□□□□ -0.36
PCDHGA4-201ENST00000571252 ANKRD18BA2A2Z9 1011 aa12.78□□□□□ -0.36
PCDHGA4-201ENST00000571252 POTEB2H3BUK9 544 aa12.78□□□□□ -0.36
PCDHGA4-201ENST00000571252 IGHMBP2P38935 993 aaKnown RBP12.78□□□□□ -0.36
PCDHGA4-201ENST00000571252 RNF41Q9H4P4 317 aaPredicted RBP12.78□□□□□ -0.36
PCDHGA4-201ENST00000571252 RANBP6O60518 1105 aaKnown RBP12.77□□□□□ -0.36
PCDHGA4-201ENST00000571252 YEATS4O95619 227 aa12.77□□□□□ -0.36
PCDHGA4-201ENST00000571252 NCOA5Q9HCD5 579 aaKnown RBP12.77□□□□□ -0.36
PCDHGA4-201ENST00000571252 SPATA31D1Q6ZQQ2 1576 aa12.77□□□□□ -0.36
PCDHGA4-201ENST00000571252 TTF1Q15361 905 aaPredicted RBP12.77□□□□□ -0.36
PCDHGA4-201ENST00000571252 KRT28Q7Z3Y7 464 aa12.77□□□□□ -0.36
PCDHGA4-201ENST00000571252 IQCA1Q86XH1 822 aa12.77□□□□□ -0.36
PCDHGA4-201ENST00000571252 CTCFLQ8NI51 663 aaPredicted RBP12.77□□□□□ -0.36
PCDHGA4-201ENST00000571252 TRMT112Q9UI30 125 aaKnown RBP12.77□□□□□ -0.36
PCDHGA4-201ENST00000571252 DIP2BQ9P265 1576 aa12.77□□□□□ -0.37
PCDHGA4-201ENST00000571252 ADAMTS13Q76LX8 1427 aa12.77□□□□□ -0.37
PCDHGA4-201ENST00000571252 GOLGA6L10A6NI86 522 aa12.77□□□□□ -0.37
PCDHGA4-201ENST00000571252 N4BP3O15049 544 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms