RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 VAMP4O75379 141 aa22.48■■□□□ 1.19
CIITA-206ENST00000571190 CSF1RP07333 972 aa22.48■■□□□ 1.19
CIITA-206ENST00000571190 KIF23Q02241 960 aaPredicted RBP22.48■■□□□ 1.19
CIITA-206ENST00000571190 DNAAF4Q8WXU2 420 aa22.48■■□□□ 1.19
CIITA-206ENST00000571190 MRS2Q9HD23 443 aa22.48■■□□□ 1.19
CIITA-206ENST00000571190 ITGA6P23229 1130 aa22.47■■□□□ 1.19
CIITA-206ENST00000571190 KLRK1P26718 216 aa22.47■■□□□ 1.19
CIITA-206ENST00000571190 ZNF157P51786 506 aaPredicted RBP22.47■■□□□ 1.19
CIITA-206ENST00000571190 FAM161AQ3B820 660 aa22.47■■□□□ 1.19
CIITA-206ENST00000571190 CCDC102AQ96A19 550 aa22.47■■□□□ 1.19
CIITA-206ENST00000571190 SCAF8Q9UPN6 1271 aaKnown RBP22.47■■□□□ 1.19
CIITA-206ENST00000571190 SLC10A3P09131 477 aa22.46■■□□□ 1.19
CIITA-206ENST00000571190 FKBP5Q13451 457 aaPredicted RBP22.46■■□□□ 1.19
CIITA-206ENST00000571190 LINS1Q8NG48 757 aa22.46■■□□□ 1.19
CIITA-206ENST00000571190 MCOLN1Q9GZU1 580 aa22.46■■□□□ 1.19
CIITA-206ENST00000571190 COA1Q9GZY4 146 aa22.46■■□□□ 1.19
CIITA-206ENST00000571190 LEMD3Q9Y2U8 911 aa22.46■■□□□ 1.19
CIITA-206ENST00000571190 IGHMBP2P38935 993 aaKnown RBP22.45■■□□□ 1.18
CIITA-206ENST00000571190 EXOSC9Q06265 439 aaKnown RBP22.45■■□□□ 1.18
CIITA-206ENST00000571190 NBPF9Q3BBW0 867 aa22.45■■□□□ 1.18
CIITA-206ENST00000571190 WDR63Q8IWG1 891 aa22.45■■□□□ 1.18
CIITA-206ENST00000571190 SPINK5Q9NQ38 1064 aaPredicted RBP22.45■■□□□ 1.18
CIITA-206ENST00000571190 SALL2Q9Y467 1007 aaPredicted RBP22.45■■□□□ 1.18
CIITA-206ENST00000571190 PITPNM2Q9BZ72 1349 aa22.45■■□□□ 1.18
CIITA-206ENST00000571190 STRIP1Q5VSL9 837 aa22.44■■□□□ 1.18
CIITA-206ENST00000571190 ZNF804BA4D1E1 1349 aa22.43■■□□□ 1.18
CIITA-206ENST00000571190 CCDC85CA6NKD9 419 aa22.43■■□□□ 1.18
CIITA-206ENST00000571190 CSRNP1Q96S65 589 aa22.43■■□□□ 1.18
CIITA-206ENST00000571190 MYH16Q9H6N6 1097 aa22.43■■□□□ 1.18
CIITA-206ENST00000571190 WNT10BO00744 389 aa22.42■■□□□ 1.18
CIITA-206ENST00000571190 PRAMEF18Q5VWM3 479 aa22.42■■□□□ 1.18
CIITA-206ENST00000571190 MOB2Q70IA6 237 aa22.42■■□□□ 1.18
CIITA-206ENST00000571190 ANKRD2Q9GZV1 360 aa22.42■■□□□ 1.18
CIITA-206ENST00000571190 RNF186Q9NXI6 227 aa22.42■■□□□ 1.18
CIITA-206ENST00000571190 SAGE1Q9NXZ1 904 aa22.42■■□□□ 1.18
CIITA-206ENST00000571190 F6X3S4 739 aa22.41■■□□□ 1.18
CIITA-206ENST00000571190 SNAP23O00161 211 aa22.41■■□□□ 1.18
CIITA-206ENST00000571190 FOXO4P98177 505 aa22.41■■□□□ 1.18
CIITA-206ENST00000571190 CHRNDQ07001 517 aa22.41■■□□□ 1.18
CIITA-206ENST00000571190 BEND3Q5T5X7 828 aa22.41■■□□□ 1.18
CIITA-206ENST00000571190 RASAL3Q86YV0 1011 aa22.41■■□□□ 1.18
CIITA-206ENST00000571190 MPHOSPH8Q99549 860 aa22.41■■□□□ 1.18
CIITA-206ENST00000571190 IRS2Q9Y4H2 1338 aa22.4■■□□□ 1.18
CIITA-206ENST00000571190 TRPA1O75762 1119 aa22.4■■□□□ 1.18
CIITA-206ENST00000571190 FKBP1BP68106 108 aa22.4■■□□□ 1.18
CIITA-206ENST00000571190 FBXW7Q969H0 707 aa22.4■■□□□ 1.18
CIITA-206ENST00000571190 MYO3BQ8WXR4 1341 aa22.39■■□□□ 1.18
CIITA-206ENST00000571190 RGS19P49795 217 aa22.39■■□□□ 1.17
CIITA-206ENST00000571190 DGKZQ13574 1117 aa22.39■■□□□ 1.17
CIITA-206ENST00000571190 TTLL5Q6EMB2 1281 aa22.39■■□□□ 1.17
CIITA-206ENST00000571190 UBE2Q2LH0YL09 131 aa22.38■■□□□ 1.17
CIITA-206ENST00000571190 ANP32CO43423 234 aa22.38■■□□□ 1.17
CIITA-206ENST00000571190 SASH1O94885 1247 aa22.38■■□□□ 1.17
CIITA-206ENST00000571190 OGFOD1Q8N543 542 aa22.38■■□□□ 1.17
CIITA-206ENST00000571190 ZBED3Q96IU2 234 aaPredicted RBP22.38■■□□□ 1.17
CIITA-206ENST00000571190 ANKRD18BA2A2Z9 1011 aa22.37■■□□□ 1.17
CIITA-206ENST00000571190 TAF5LO75529 589 aa22.37■■□□□ 1.17
CIITA-206ENST00000571190 GTF2IP78347 998 aa22.37■■□□□ 1.17
CIITA-206ENST00000571190 EPHA10Q5JZY3 1008 aa22.37■■□□□ 1.17
CIITA-206ENST00000571190 CD209Q9NNX6 404 aa22.37■■□□□ 1.17
CIITA-206ENST00000571190 C15orf52Q6ZUT6 534 aaKnown RBP22.36■■□□□ 1.17
CIITA-206ENST00000571190 KIAA0825Q8IV33 1275 aa22.36■■□□□ 1.17
CIITA-206ENST00000571190 HELBQ8NG08 1087 aaPredicted RBP22.36■■□□□ 1.17
CIITA-206ENST00000571190 MMP14P50281 582 aa22.35■■□□□ 1.17
CIITA-206ENST00000571190 CERS5Q8N5B7 392 aa22.35■■□□□ 1.17
CIITA-206ENST00000571190 KCNJ4P48050 445 aa22.34■■□□□ 1.17
CIITA-206ENST00000571190 IFIT5Q13325 482 aaKnown RBP22.34■■□□□ 1.17
CIITA-206ENST00000571190 LMBR1LQ6UX01 489 aa22.34■■□□□ 1.17
CIITA-206ENST00000571190 ZNF316A6NFI3 1004 aaPredicted RBP22.33■■□□□ 1.17
CIITA-206ENST00000571190 PSME4Q14997 1843 aa22.33■■□□□ 1.16
CIITA-206ENST00000571190 REM2Q8IYK8 340 aaPredicted RBP22.32■■□□□ 1.16
CIITA-206ENST00000571190 ZNF594Q96JF6 807 aaPredicted RBP22.32■■□□□ 1.16
CIITA-206ENST00000571190 PAPPA2Q9BXP8 1791 aa22.32■■□□□ 1.16
CIITA-206ENST00000571190 POLR2AP24928 1970 aaKnown RBP22.32■■□□□ 1.16
CIITA-206ENST00000571190 ZNF646O15015 1829 aaPredicted RBP22.31■■□□□ 1.16
CIITA-206ENST00000571190 GRM8O00222 908 aa22.31■■□□□ 1.16
CIITA-206ENST00000571190 IL1R1P14778 569 aa22.31■■□□□ 1.16
CIITA-206ENST00000571190 HDAC9Q9UKV0 1011 aa22.31■■□□□ 1.16
CIITA-206ENST00000571190 CHMP3Q9Y3E7 222 aa22.31■■□□□ 1.16
CIITA-206ENST00000571190 PCDHAC2Q9Y5I4 1007 aa22.31■■□□□ 1.16
CIITA-206ENST00000571190 MLLT1Q03111 559 aaPredicted RBP22.3■■□□□ 1.16
CIITA-206ENST00000571190 PTPN12Q05209 780 aaKnown RBP22.3■■□□□ 1.16
CIITA-206ENST00000571190 TTLL12Q14166 644 aaPredicted RBP22.29■■□□□ 1.16
CIITA-206ENST00000571190 APOBEC3FQ8IUX4 373 aaKnown RBP22.29■■□□□ 1.16
CIITA-206ENST00000571190 FAM9BQ8IZU0 186 aa22.29■■□□□ 1.16
CIITA-206ENST00000571190 PRKG1Q13976 671 aa22.28■■□□□ 1.16
CIITA-206ENST00000571190 LDLRAD1Q5T700 205 aa22.28■■□□□ 1.16
CIITA-206ENST00000571190 LDHAL6AQ6ZMR3 332 aa22.28■■□□□ 1.16
CIITA-206ENST00000571190 MTMR14Q8NCE2 650 aa22.28■■□□□ 1.16
CIITA-206ENST00000571190 KAZALD1Q96I82 304 aa22.28■■□□□ 1.16
CIITA-206ENST00000571190 FZD1Q9UP38 647 aa22.28■■□□□ 1.16
CIITA-206ENST00000571190 ALDH1L1O75891 902 aa22.27■■□□□ 1.16
CIITA-206ENST00000571190 NF2P35240 595 aa22.27■■□□□ 1.16
CIITA-206ENST00000571190 ZEB1P37275 1124 aaPredicted RBP22.27■■□□□ 1.16
CIITA-206ENST00000571190 TM4SF4P48230 202 aa22.27■■□□□ 1.16
CIITA-206ENST00000571190 DLGAP5Q15398 846 aa22.27■■□□□ 1.16
CIITA-206ENST00000571190 CCDC57Q2TAC2 916 aa22.27■■□□□ 1.16
CIITA-206ENST00000571190 AOX1Q06278 1338 aa22.27■■□□□ 1.16
CIITA-206ENST00000571190 ZNF521Q96K83 1311 aa22.27■■□□□ 1.16
CIITA-206ENST00000571190 CASP8AP2Q9UKL3 1982 aa22.27■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms