RNA–Protein interactions for RNA: ENST00000571186.5

CIITA-205, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 1,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-205ENST00000571186 MAP3K2Q9Y2U5 619 aa18.42■□□□□ 0.54
CIITA-205ENST00000571186 PITPNM2Q9BZ72 1349 aa18.42■□□□□ 0.54
CIITA-205ENST00000571186 PAPPA2Q9BXP8 1791 aa18.42■□□□□ 0.54
CIITA-205ENST00000571186 ZNF609O15014 1411 aa18.41■□□□□ 0.54
CIITA-205ENST00000571186 CTSWP56202 376 aa18.41■□□□□ 0.54
CIITA-205ENST00000571186 TTLL12Q14166 644 aaPredicted RBP18.41■□□□□ 0.54
CIITA-205ENST00000571186 FBXW7Q969H0 707 aa18.41■□□□□ 0.54
CIITA-205ENST00000571186 NBPF9Q3BBW0 867 aa18.4■□□□□ 0.54
CIITA-205ENST00000571186 OGFOD1Q8N543 542 aa18.4■□□□□ 0.54
CIITA-205ENST00000571186 MXD3Q9BW11 206 aa18.4■□□□□ 0.54
CIITA-205ENST00000571186 MINPP1Q9UNW1 487 aa18.4■□□□□ 0.54
CIITA-205ENST00000571186 PI4KAP2A4QPH2 592 aa18.39■□□□□ 0.53
CIITA-205ENST00000571186 KSR2Q6VAB6 950 aa18.39■□□□□ 0.53
CIITA-205ENST00000571186 PI4KAP1Q8N8J0 262 aa18.39■□□□□ 0.53
CIITA-205ENST00000571186 TTLL11Q8NHH1 800 aa18.39■□□□□ 0.53
CIITA-205ENST00000571186 BSDC1Q9NW68 430 aaPredicted RBP18.39■□□□□ 0.53
CIITA-205ENST00000571186 TBC1D8O95759 1140 aa18.38■□□□□ 0.53
CIITA-205ENST00000571186 IGKV5-2P06315 115 aa18.38■□□□□ 0.53
CIITA-205ENST00000571186 CCT4P50991 539 aaKnown RBP18.38■□□□□ 0.53
CIITA-205ENST00000571186 NEXNQ0ZGT2 675 aa18.38■□□□□ 0.53
CIITA-205ENST00000571186 TSPYL6Q8N831 410 aa18.38■□□□□ 0.53
CIITA-205ENST00000571186 GREM2Q9H772 168 aa18.38■□□□□ 0.53
CIITA-205ENST00000571186 HDAC9Q9UKV0 1011 aa18.38■□□□□ 0.53
CIITA-205ENST00000571186 DACT2Q5SW24 774 aa18.37■□□□□ 0.53
CIITA-205ENST00000571186 MED23Q9ULK4 1368 aa18.37■□□□□ 0.53
CIITA-205ENST00000571186 WNT10BO00744 389 aa18.36■□□□□ 0.53
CIITA-205ENST00000571186 NF2P35240 595 aa18.36■□□□□ 0.53
CIITA-205ENST00000571186 MKRN3Q13064 507 aaKnown RBP18.36■□□□□ 0.53
CIITA-205ENST00000571186 MYO3BQ8WXR4 1341 aa18.35■□□□□ 0.53
CIITA-205ENST00000571186 CWF19L2Q2TBE0 894 aaKnown RBP18.35■□□□□ 0.53
CIITA-205ENST00000571186 STRIP1Q5VSL9 837 aa18.35■□□□□ 0.53
CIITA-205ENST00000571186 TTLL5Q6EMB2 1281 aa18.35■□□□□ 0.53
CIITA-205ENST00000571186 ZNF296Q8WUU4 475 aaPredicted RBP18.35■□□□□ 0.53
CIITA-205ENST00000571186 STK31Q9BXU1 1019 aa18.35■□□□□ 0.53
CIITA-205ENST00000571186 COA1Q9GZY4 146 aa18.35■□□□□ 0.53
CIITA-205ENST00000571186 HPS5Q9UPZ3 1129 aa18.35■□□□□ 0.53
CIITA-205ENST00000571186 ZNF646O15015 1829 aaPredicted RBP18.35■□□□□ 0.53
CIITA-205ENST00000571186 SASH1O94885 1247 aa18.34■□□□□ 0.53
CIITA-205ENST00000571186 IGHMBP2P38935 993 aaKnown RBP18.34■□□□□ 0.53
CIITA-205ENST00000571186 TM4SF4P48230 202 aa18.34■□□□□ 0.53
CIITA-205ENST00000571186 PRKG1Q13976 671 aa18.34■□□□□ 0.53
CIITA-205ENST00000571186 PKN2Q16513 984 aaKnown RBP18.34■□□□□ 0.53
CIITA-205ENST00000571186 UBE3BQ7Z3V4 1068 aa18.34■□□□□ 0.53
CIITA-205ENST00000571186 TXNRD3Q86VQ6 643 aa18.34■□□□□ 0.53
CIITA-205ENST00000571186 LEMD3Q9Y2U8 911 aa18.34■□□□□ 0.53
CIITA-205ENST00000571186 NEURL1BA8MQ27 555 aa18.33■□□□□ 0.52
CIITA-205ENST00000571186 TSR2Q969E8 191 aaKnown RBP18.33■□□□□ 0.52
CIITA-205ENST00000571186 H7C1W4 665 aa18.32■□□□□ 0.52
CIITA-205ENST00000571186 PTPN12Q05209 780 aaKnown RBP18.32■□□□□ 0.52
CIITA-205ENST00000571186 ARMC9Q7Z3E5 817 aa18.32■□□□□ 0.52
CIITA-205ENST00000571186 KIAA0825Q8IV33 1275 aa18.32■□□□□ 0.52
CIITA-205ENST00000571186 FAM9BQ8IZU0 186 aa18.32■□□□□ 0.52
CIITA-205ENST00000571186 MPHOSPH8Q99549 860 aa18.32■□□□□ 0.52
CIITA-205ENST00000571186 ANKRD2Q9GZV1 360 aa18.32■□□□□ 0.52
CIITA-205ENST00000571186 ZNF804BA4D1E1 1349 aa18.31■□□□□ 0.52
CIITA-205ENST00000571186 GPR25O00155 361 aa18.31■□□□□ 0.52
CIITA-205ENST00000571186 MMP14P50281 582 aa18.31■□□□□ 0.52
CIITA-205ENST00000571186 GTF2IP78347 998 aa18.31■□□□□ 0.52
CIITA-205ENST00000571186 G2E3Q7L622 706 aa18.31■□□□□ 0.52
CIITA-205ENST00000571186 CACNA1FO60840 1977 aa18.31■□□□□ 0.52
CIITA-205ENST00000571186 SLC4A2P04920 1241 aa18.3■□□□□ 0.52
CIITA-205ENST00000571186 ITGA6P23229 1130 aa18.3■□□□□ 0.52
CIITA-205ENST00000571186 KLRK1P26718 216 aa18.3■□□□□ 0.52
CIITA-205ENST00000571186 KCNJ4P48050 445 aa18.3■□□□□ 0.52
CIITA-205ENST00000571186 SREBF2Q12772 1141 aa18.3■□□□□ 0.52
CIITA-205ENST00000571186 APOBEC3FQ8IUX4 373 aaKnown RBP18.3■□□□□ 0.52
CIITA-205ENST00000571186 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.3■□□□□ 0.52
CIITA-205ENST00000571186 PCDH10Q9P2E7 1040 aa18.3■□□□□ 0.52
CIITA-205ENST00000571186 TWISTNBQ3B726 338 aaPredicted RBP18.29■□□□□ 0.52
CIITA-205ENST00000571186 ANGEL1Q9UNK9 670 aaKnown RBP18.29■□□□□ 0.52
CIITA-205ENST00000571186 FKTNO75072 461 aa18.28■□□□□ 0.52
CIITA-205ENST00000571186 GCKRQ14397 625 aa18.28■□□□□ 0.52
CIITA-205ENST00000571186 SALL2Q9Y467 1007 aaPredicted RBP18.28■□□□□ 0.52
CIITA-205ENST00000571186 DLGAP5Q15398 846 aa18.27■□□□□ 0.52
CIITA-205ENST00000571186 NOM1Q5C9Z4 860 aaKnown RBP18.27■□□□□ 0.52
CIITA-205ENST00000571186 LDLRAD1Q5T700 205 aa18.27■□□□□ 0.52
CIITA-205ENST00000571186 FBXO46Q6PJ61 603 aaPredicted RBP18.27■□□□□ 0.52
CIITA-205ENST00000571186 SLC10A4Q96EP9 437 aa18.27■□□□□ 0.52
CIITA-205ENST00000571186 PLA2G12BQ9BX93 195 aa18.27■□□□□ 0.52
CIITA-205ENST00000571186 R3HDMLQ9H3Y0 253 aa18.27■□□□□ 0.52
CIITA-205ENST00000571186 MYH16Q9H6N6 1097 aa18.27■□□□□ 0.52
CIITA-205ENST00000571186 FZD1Q9UP38 647 aa18.27■□□□□ 0.52
CIITA-205ENST00000571186 ECM29Q5VYK3 1845 aa18.26■□□□□ 0.51
CIITA-205ENST00000571186 CSF1RP07333 972 aa18.26■□□□□ 0.51
CIITA-205ENST00000571186 CHRNDQ07001 517 aa18.26■□□□□ 0.51
CIITA-205ENST00000571186 PRPF38BQ5VTL8 546 aaKnown RBP18.26■□□□□ 0.51
CIITA-205ENST00000571186 SPRYD7Q5W111 196 aa18.26■□□□□ 0.51
CIITA-205ENST00000571186 ZBED3Q96IU2 234 aaPredicted RBP18.26■□□□□ 0.51
CIITA-205ENST00000571186 DEFB129Q9H1M3 183 aa18.26■□□□□ 0.51
CIITA-205ENST00000571186 CD209Q9NNX6 404 aa18.26■□□□□ 0.51
CIITA-205ENST00000571186 ANKRD18BA2A2Z9 1011 aa18.25■□□□□ 0.51
CIITA-205ENST00000571186 SNAP23O00161 211 aa18.25■□□□□ 0.51
CIITA-205ENST00000571186 FKBP5Q13451 457 aaPredicted RBP18.25■□□□□ 0.51
CIITA-205ENST00000571186 HELBQ8NG08 1087 aaPredicted RBP18.25■□□□□ 0.51
CIITA-205ENST00000571186 TAF5LO75529 589 aa18.24■□□□□ 0.51
CIITA-205ENST00000571186 CASP7P55210 303 aa18.24■□□□□ 0.51
CIITA-205ENST00000571186 FLIIQ13045 1269 aa18.24■□□□□ 0.51
CIITA-205ENST00000571186 WWC1Q8IX03 1113 aa18.24■□□□□ 0.51
CIITA-205ENST00000571186 DNAAF4Q8WXU2 420 aa18.24■□□□□ 0.51
CIITA-205ENST00000571186 F8W031 263 aaPredicted RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms