RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 NSUN7Q8NE18 718 aaKnown RBP17.91■□□□□ 0.46
SMG6-207ENST00000570756 FBXW7Q969H0 707 aa17.91■□□□□ 0.46
SMG6-207ENST00000570756 KIAA1468Q9P260 1216 aa17.91■□□□□ 0.46
SMG6-207ENST00000570756 NWD1Q149M9 1564 aa17.91■□□□□ 0.46
SMG6-207ENST00000570756 A0A1W2PQ27 194 aa17.9■□□□□ 0.46
SMG6-207ENST00000570756 A0A1W2PQ64 194 aa17.9■□□□□ 0.46
SMG6-207ENST00000570756 A0A1W2PQD8 194 aa17.9■□□□□ 0.46
SMG6-207ENST00000570756 HOXC9P31274 260 aa17.9■□□□□ 0.46
SMG6-207ENST00000570756 LRRFIP1Q32MZ4 808 aaKnown RBP17.9■□□□□ 0.46
SMG6-207ENST00000570756 CHMP4CQ96CF2 233 aa17.9■□□□□ 0.46
SMG6-207ENST00000570756 MAP3K2Q9Y2U5 619 aa17.9■□□□□ 0.46
SMG6-207ENST00000570756 POLR3GO15318 223 aaPredicted RBP17.9■□□□□ 0.46
SMG6-207ENST00000570756 TADA3O75528 432 aa17.9■□□□□ 0.46
SMG6-207ENST00000570756 ADALQ6DHV7 355 aa17.9■□□□□ 0.46
SMG6-207ENST00000570756 C14orf37Q86TY3 774 aa17.9■□□□□ 0.46
SMG6-207ENST00000570756 PROSER2Q86WR7 435 aaPredicted RBP17.9■□□□□ 0.46
SMG6-207ENST00000570756 PTPDC1A2A3K4 754 aa17.89■□□□□ 0.45
SMG6-207ENST00000570756 TLR7Q9NYK1 1049 aaKnown RBP17.89■□□□□ 0.45
SMG6-207ENST00000570756 FEZ2Q9UHY8 353 aaPredicted RBP17.89■□□□□ 0.45
SMG6-207ENST00000570756 KDM3BQ7LBC6 1761 aa17.89■□□□□ 0.45
SMG6-207ENST00000570756 RFX7Q2KHR2 1363 aa17.89■□□□□ 0.45
SMG6-207ENST00000570756 DPCR1Q3MIW9 517 aa17.89■□□□□ 0.45
SMG6-207ENST00000570756 KSR2Q6VAB6 950 aa17.89■□□□□ 0.45
SMG6-207ENST00000570756 SYTL4Q96C24 671 aaPredicted RBP17.89■□□□□ 0.45
SMG6-207ENST00000570756 MED1Q15648 1581 aaPredicted RBP17.88■□□□□ 0.45
SMG6-207ENST00000570756 PSME1Q06323 249 aa17.88■□□□□ 0.45
SMG6-207ENST00000570756 UBXN6Q9BZV1 441 aa17.88■□□□□ 0.45
SMG6-207ENST00000570756 NCAPD2Q15021 1401 aa17.88■□□□□ 0.45
SMG6-207ENST00000570756 URI1O94763 535 aaPredicted RBP17.88■□□□□ 0.45
SMG6-207ENST00000570756 ANXA1P04083 346 aa17.88■□□□□ 0.45
SMG6-207ENST00000570756 NEK11Q8NG66 645 aa17.88■□□□□ 0.45
SMG6-207ENST00000570756 ERCC4Q92889 916 aaPredicted RBP17.88■□□□□ 0.45
SMG6-207ENST00000570756 TRIM34Q9BYJ4 488 aa17.88■□□□□ 0.45
SMG6-207ENST00000570756 CWC15Q9P013 229 aaKnown RBP17.88■□□□□ 0.45
SMG6-207ENST00000570756 PCDHA7Q9UN72 937 aa17.88■□□□□ 0.45
SMG6-207ENST00000570756 GRM8O00222 908 aa17.87■□□□□ 0.45
SMG6-207ENST00000570756 FOSBP53539 338 aa17.87■□□□□ 0.45
SMG6-207ENST00000570756 FCHSD1Q86WN1 690 aa17.87■□□□□ 0.45
SMG6-207ENST00000570756 NGDNQ8NEJ9 315 aaKnown RBP17.87■□□□□ 0.45
SMG6-207ENST00000570756 TRERF1Q96PN7 1200 aa17.87■□□□□ 0.45
SMG6-207ENST00000570756 RTEL1Q9NZ71 1219 aa17.87■□□□□ 0.45
SMG6-207ENST00000570756 ABCC6O95255 1503 aa17.87■□□□□ 0.45
SMG6-207ENST00000570756 ZSCAN12O43309 604 aa17.87■□□□□ 0.45
SMG6-207ENST00000570756 CYP21A2P08686 494 aa17.87■□□□□ 0.45
SMG6-207ENST00000570756 NLRP12P59046 1061 aa17.87■□□□□ 0.45
SMG6-207ENST00000570756 DHX32Q7L7V1 743 aaKnown RBP17.87■□□□□ 0.45
SMG6-207ENST00000570756 PIK3C2AO00443 1686 aa17.86■□□□□ 0.45
SMG6-207ENST00000570756 CBFA2T2O43439 604 aa17.86■□□□□ 0.45
SMG6-207ENST00000570756 SF3A1Q15459 793 aaKnown RBP17.86■□□□□ 0.45
SMG6-207ENST00000570756 KCNG4Q8TDN1 519 aa17.86■□□□□ 0.45
SMG6-207ENST00000570756 A0A1B0GVL5 298 aa17.86■□□□□ 0.45
SMG6-207ENST00000570756 IKBKBO14920 756 aa17.86■□□□□ 0.45
SMG6-207ENST00000570756 SLC3A2P08195 630 aaKnown RBP17.86■□□□□ 0.45
SMG6-207ENST00000570756 OAS2P29728 719 aaKnown RBP17.86■□□□□ 0.45
SMG6-207ENST00000570756 EVCP57679 992 aa17.86■□□□□ 0.45
SMG6-207ENST00000570756 TRIM65Q6PJ69 517 aa17.86■□□□□ 0.45
SMG6-207ENST00000570756 KRBA2Q6ZNG9 492 aa17.86■□□□□ 0.45
SMG6-207ENST00000570756 GPR161Q8N6U8 529 aaKnown RBP17.86■□□□□ 0.45
SMG6-207ENST00000570756 LINS1Q8NG48 757 aa17.86■□□□□ 0.45
SMG6-207ENST00000570756 SUCLG2Q96I99 432 aa17.86■□□□□ 0.45
SMG6-207ENST00000570756 AK7Q96M32 723 aa17.86■□□□□ 0.45
SMG6-207ENST00000570756 CARD6Q9BX69 1037 aa17.86■□□□□ 0.45
SMG6-207ENST00000570756 BICC1Q9H694 974 aaKnown RBP17.86■□□□□ 0.45
SMG6-207ENST00000570756 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.86■□□□□ 0.45
SMG6-207ENST00000570756 UTYO14607 1347 aa17.85■□□□□ 0.45
SMG6-207ENST00000570756 CTDNEP1O95476 244 aa17.85■□□□□ 0.45
SMG6-207ENST00000570756 NDUFA8P51970 172 aa17.85■□□□□ 0.45
SMG6-207ENST00000570756 NLRP6P59044 892 aa17.85■□□□□ 0.45
SMG6-207ENST00000570756 FANCCQ00597 558 aa17.85■□□□□ 0.45
SMG6-207ENST00000570756 CWF19L2Q2TBE0 894 aaKnown RBP17.85■□□□□ 0.45
SMG6-207ENST00000570756 MPHOSPH8Q99549 860 aa17.85■□□□□ 0.45
SMG6-207ENST00000570756 TMEM94Q12767 1356 aa17.85■□□□□ 0.45
SMG6-207ENST00000570756 MRC1P22897 1456 aa17.85■□□□□ 0.45
SMG6-207ENST00000570756 TEFQ10587 303 aa17.84■□□□□ 0.45
SMG6-207ENST00000570756 SMC1AQ14683 1233 aaKnown RBP17.84■□□□□ 0.45
SMG6-207ENST00000570756 CC2D1AQ6P1N0 951 aaPredicted RBP17.84■□□□□ 0.45
SMG6-207ENST00000570756 FMNL2Q96PY5 1086 aa17.84■□□□□ 0.45
SMG6-207ENST00000570756 LRRC2Q9BYS8 371 aa17.84■□□□□ 0.45
SMG6-207ENST00000570756 PARP3Q9Y6F1 533 aa17.84■□□□□ 0.45
SMG6-207ENST00000570756 COL15A1P39059 1388 aa17.84■□□□□ 0.45
SMG6-207ENST00000570756 GOLGA6L9A6NEM1 432 aa17.84■□□□□ 0.45
SMG6-207ENST00000570756 TBC1D8O95759 1140 aa17.84■□□□□ 0.45
SMG6-207ENST00000570756 ATP5JP18859 108 aa17.84■□□□□ 0.45
SMG6-207ENST00000570756 STK38Q15208 465 aa17.84■□□□□ 0.45
SMG6-207ENST00000570756 MCMDC2Q4G0Z9 681 aa17.84■□□□□ 0.45
SMG6-207ENST00000570756 SMARCE1Q969G3 411 aa17.84■□□□□ 0.45
SMG6-207ENST00000570756 LTV1Q96GA3 475 aaPredicted RBP17.84■□□□□ 0.45
SMG6-207ENST00000570756 SIL1Q9H173 461 aa17.84■□□□□ 0.45
SMG6-207ENST00000570756 ARFGAP3Q9NP61 516 aa17.84■□□□□ 0.45
SMG6-207ENST00000570756 SALL1Q9NSC2 1324 aa17.84■□□□□ 0.45
SMG6-207ENST00000570756 BTBD11A6QL63 1104 aa17.83■□□□□ 0.45
SMG6-207ENST00000570756 SEC31AO94979 1220 aaKnown RBP17.83■□□□□ 0.45
SMG6-207ENST00000570756 NCAPHQ15003 741 aa17.83■□□□□ 0.45
SMG6-207ENST00000570756 RASSF4Q9H2L5 321 aa17.83■□□□□ 0.45
SMG6-207ENST00000570756 YEATS4O95619 227 aa17.83■□□□□ 0.44
SMG6-207ENST00000570756 ZSCAN26Q16670 478 aa17.83■□□□□ 0.44
SMG6-207ENST00000570756 ILDR1Q86SU0 546 aaPredicted RBP17.83■□□□□ 0.44
SMG6-207ENST00000570756 LINC00301Q8NCQ3 95 aa17.83■□□□□ 0.44
SMG6-207ENST00000570756 DDX58O95786 925 aaKnown RBP17.82■□□□□ 0.44
SMG6-207ENST00000570756 TNNT3P45378 269 aaPredicted RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms