RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 CFAP100Q494V2 611 aa17.85■□□□□ 0.45
USP43-202ENST00000570475 MRPS27Q92552 414 aaKnown RBP17.85■□□□□ 0.45
USP43-202ENST00000570475 SPTLC3Q9NUV7 552 aa17.85■□□□□ 0.45
USP43-202ENST00000570475 CWC25Q9NXE8 425 aaPredicted RBP17.85■□□□□ 0.45
USP43-202ENST00000570475 A0A0U1RQG5 324 aaPredicted RBP17.84■□□□□ 0.45
USP43-202ENST00000570475 SFPQP23246 707 aaKnown RBP eCLIP17.84■□□□□ 0.45
USP43-202ENST00000570475 FAM89AQ96GI7 184 aa17.84■□□□□ 0.45
USP43-202ENST00000570475 CEMIPQ8WUJ3 1361 aa17.84■□□□□ 0.45
USP43-202ENST00000570475 PRC1O43663 620 aa17.84■□□□□ 0.45
USP43-202ENST00000570475 HMGB1P09429 215 aaKnown RBP17.84■□□□□ 0.45
USP43-202ENST00000570475 HSPD1P10809 573 aaKnown RBP17.84■□□□□ 0.45
USP43-202ENST00000570475 SPECC1Q5M775 1068 aa17.84■□□□□ 0.45
USP43-202ENST00000570475 CNNM1Q9NRU3 951 aa17.84■□□□□ 0.45
USP43-202ENST00000570475 TRIM29Q14134 588 aa17.83■□□□□ 0.45
USP43-202ENST00000570475 PDIA6Q15084 440 aa17.83■□□□□ 0.45
USP43-202ENST00000570475 KIF18AQ8NI77 898 aa17.83■□□□□ 0.45
USP43-202ENST00000570475 MYL10Q9BUA6 226 aa17.83■□□□□ 0.45
USP43-202ENST00000570475 ZNF215Q9UL58 517 aaPredicted RBP17.83■□□□□ 0.45
USP43-202ENST00000570475 CLIC4Q9Y696 253 aa17.83■□□□□ 0.45
USP43-202ENST00000570475 ELP1O95163 1332 aa17.83■□□□□ 0.44
USP43-202ENST00000570475 FAM160A1Q05DH4 1040 aa17.83■□□□□ 0.44
USP43-202ENST00000570475 RIMBP3CA6NJZ7 1639 aa17.83■□□□□ 0.44
USP43-202ENST00000570475 RIMBP3BA6NNM3 1639 aa17.83■□□□□ 0.44
USP43-202ENST00000570475 RIMBP3Q9UFD9 1639 aa17.83■□□□□ 0.44
USP43-202ENST00000570475 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.83■□□□□ 0.44
USP43-202ENST00000570475 SMTNL1A8MU46 457 aa17.82■□□□□ 0.44
USP43-202ENST00000570475 ZNF213O14771 459 aa17.82■□□□□ 0.44
USP43-202ENST00000570475 PDIA4P13667 645 aaKnown RBP17.82■□□□□ 0.44
USP43-202ENST00000570475 SYT10Q6XYQ8 523 aa17.82■□□□□ 0.44
USP43-202ENST00000570475 LRRC8AQ8IWT6 810 aa17.82■□□□□ 0.44
USP43-202ENST00000570475 SMAP1Q8IYB5 467 aaPredicted RBP17.82■□□□□ 0.44
USP43-202ENST00000570475 HELBQ8NG08 1087 aaPredicted RBP17.82■□□□□ 0.44
USP43-202ENST00000570475 COPRSQ9NQ92 184 aa17.82■□□□□ 0.44
USP43-202ENST00000570475 PCDHA7Q9UN72 937 aa17.82■□□□□ 0.44
USP43-202ENST00000570475 NDUFA8P51970 172 aa17.82■□□□□ 0.44
USP43-202ENST00000570475 GOLGA8FQ08AF8 430 aa17.82■□□□□ 0.44
USP43-202ENST00000570475 GOLGA8DPQ0D2H9 430 aa17.82■□□□□ 0.44
USP43-202ENST00000570475 METTL24Q5JXM2 366 aa17.82■□□□□ 0.44
USP43-202ENST00000570475 AIFM3Q96NN9 605 aa17.82■□□□□ 0.44
USP43-202ENST00000570475 PODXL2Q9NZ53 605 aa17.82■□□□□ 0.44
USP43-202ENST00000570475 USP42Q9H9J4 1324 aaKnown RBP17.82■□□□□ 0.44
USP43-202ENST00000570475 EVA1CP58658 441 aa17.82■□□□□ 0.44
USP43-202ENST00000570475 ELF2Q15723 593 aa17.82■□□□□ 0.44
USP43-202ENST00000570475 HAUS7Q99871 368 aa17.82■□□□□ 0.44
USP43-202ENST00000570475 CTAGE5O15320 804 aa17.81■□□□□ 0.44
USP43-202ENST00000570475 RNF113AO15541 343 aaKnown RBP17.81■□□□□ 0.44
USP43-202ENST00000570475 PHKG2P15735 406 aa17.81■□□□□ 0.44
USP43-202ENST00000570475 ADORA1P30542 326 aa17.81■□□□□ 0.44
USP43-202ENST00000570475 TDRD7Q8NHU6 1098 aaKnown RBP17.81■□□□□ 0.44
USP43-202ENST00000570475 PRDM11Q9NQV5 511 aa17.81■□□□□ 0.44
USP43-202ENST00000570475 C3P01024 1663 aa17.81■□□□□ 0.44
USP43-202ENST00000570475 SPTLC2O15270 562 aa17.81■□□□□ 0.44
USP43-202ENST00000570475 PDIA3P30101 505 aaKnown RBP17.81■□□□□ 0.44
USP43-202ENST00000570475 SNW1Q13573 536 aaKnown RBP17.81■□□□□ 0.44
USP43-202ENST00000570475 DPCR1Q3MIW9 517 aa17.81■□□□□ 0.44
USP43-202ENST00000570475 CPLX2Q6PUV4 134 aaKnown RBP17.81■□□□□ 0.44
USP43-202ENST00000570475 MNS1Q8NEH6 495 aa17.81■□□□□ 0.44
USP43-202ENST00000570475 PHKBQ93100 1093 aa17.81■□□□□ 0.44
USP43-202ENST00000570475 DHX16O60231 1041 aaKnown RBP17.81■□□□□ 0.44
USP43-202ENST00000570475 PFKFB2O60825 505 aa17.8■□□□□ 0.44
USP43-202ENST00000570475 NCBP1Q09161 790 aaKnown RBP17.8■□□□□ 0.44
USP43-202ENST00000570475 TRERF1Q96PN7 1200 aa17.8■□□□□ 0.44
USP43-202ENST00000570475 XPO4Q9C0E2 1151 aaKnown RBP17.8■□□□□ 0.44
USP43-202ENST00000570475 URI1O94763 535 aaPredicted RBP17.8■□□□□ 0.44
USP43-202ENST00000570475 NUP133Q8WUM0 1156 aa17.8■□□□□ 0.44
USP43-202ENST00000570475 PAXBP1Q9Y5B6 917 aa17.79■□□□□ 0.44
USP43-202ENST00000570475 M0R2C6 588 aa17.79■□□□□ 0.44
USP43-202ENST00000570475 ADD1P35611 737 aaKnown RBP17.79■□□□□ 0.44
USP43-202ENST00000570475 OSBP2Q969R2 916 aa17.79■□□□□ 0.44
USP43-202ENST00000570475 DNAI1Q9UI46 699 aa17.79■□□□□ 0.44
USP43-202ENST00000570475 CTNNA3Q9UI47 895 aa17.79■□□□□ 0.44
USP43-202ENST00000570475 ZNF609O15014 1411 aa17.79■□□□□ 0.44
USP43-202ENST00000570475 ZAP70P43403 619 aa17.78■□□□□ 0.44
USP43-202ENST00000570475 MAPK8IP2Q13387 824 aaPredicted RBP17.78■□□□□ 0.44
USP43-202ENST00000570475 LDHAL6AQ6ZMR3 332 aa17.78■□□□□ 0.44
USP43-202ENST00000570475 IL15P40933 162 aaPredicted RBP17.78■□□□□ 0.44
USP43-202ENST00000570475 LRRFIP1Q32MZ4 808 aaKnown RBP17.78■□□□□ 0.44
USP43-202ENST00000570475 ZSWIM4Q9H7M6 989 aa17.78■□□□□ 0.44
USP43-202ENST00000570475 CGNQ9P2M7 1197 aaKnown RBP17.78■□□□□ 0.44
USP43-202ENST00000570475 MAST3O60307 1309 aa17.78■□□□□ 0.44
USP43-202ENST00000570475 PXDNQ92626 1479 aa17.77■□□□□ 0.44
USP43-202ENST00000570475 EYA2O00167 538 aa17.77■□□□□ 0.44
USP43-202ENST00000570475 SLC9C2Q5TAH2 1124 aa17.77■□□□□ 0.44
USP43-202ENST00000570475 OLFM4Q6UX06 510 aa17.77■□□□□ 0.44
USP43-202ENST00000570475 PLA2G4DQ86XP0 818 aa17.77■□□□□ 0.44
USP43-202ENST00000570475 ALG1Q9BT22 464 aa17.77■□□□□ 0.44
USP43-202ENST00000570475 MON2Q7Z3U7 1717 aa17.77■□□□□ 0.44
USP43-202ENST00000570475 IFIT5Q13325 482 aaKnown RBP17.77■□□□□ 0.44
USP43-202ENST00000570475 KLHL10Q6JEL2 608 aa17.77■□□□□ 0.44
USP43-202ENST00000570475 SYNE4Q8N205 404 aa17.77■□□□□ 0.44
USP43-202ENST00000570475 PLBD2Q8NHP8 589 aa17.77■□□□□ 0.44
USP43-202ENST00000570475 ZKSCAN3Q9BRR0 538 aa17.77■□□□□ 0.44
USP43-202ENST00000570475 NRXN3Q9Y4C0 1643 aa17.77■□□□□ 0.43
USP43-202ENST00000570475 CTDNEP1O95476 244 aa17.77■□□□□ 0.43
USP43-202ENST00000570475 SYKP43405 635 aa17.77■□□□□ 0.43
USP43-202ENST00000570475 CPLX3Q8WVH0 158 aa17.77■□□□□ 0.43
USP43-202ENST00000570475 IQSEC3Q9UPP2 1182 aaPredicted RBP17.77■□□□□ 0.43
USP43-202ENST00000570475 DIP2BQ9P265 1576 aa17.76■□□□□ 0.43
USP43-202ENST00000570475 CYP27B1O15528 508 aa17.76■□□□□ 0.43
USP43-202ENST00000570475 ZNF202O95125 648 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms