RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 KIF20AO95235 890 aa9.63□□□□□ -0.87
TCF4-246ENST00000570287 FBXO45P0C2W1 286 aa9.63□□□□□ -0.87
TCF4-246ENST00000570287 OCLNQ16625 522 aa9.63□□□□□ -0.87
TCF4-246ENST00000570287 GTF3C2Q8WUA4 911 aaPredicted RBP9.63□□□□□ -0.87
TCF4-246ENST00000570287 JDP2Q8WYK2 163 aa9.63□□□□□ -0.87
TCF4-246ENST00000570287 BABAM1Q9NWV8 329 aa9.63□□□□□ -0.87
TCF4-246ENST00000570287 PARP2Q9UGN5 583 aa9.63□□□□□ -0.87
TCF4-246ENST00000570287 SOS1Q07889 1333 aaPredicted RBP9.63□□□□□ -0.87
TCF4-246ENST00000570287 GNAT3A8MTJ3 354 aa9.63□□□□□ -0.87
TCF4-246ENST00000570287 C3orf80F5H4A9 247 aa9.63□□□□□ -0.87
TCF4-246ENST00000570287 ZNF445P59923 1031 aa9.63□□□□□ -0.87
TCF4-246ENST00000570287 GTPBP4Q9BZE4 634 aaKnown RBP9.63□□□□□ -0.87
TCF4-246ENST00000570287 ZBTB3Q9H5J0 574 aa9.63□□□□□ -0.87
TCF4-246ENST00000570287 KIAA1024Q9UPX6 916 aa9.63□□□□□ -0.87
TCF4-246ENST00000570287 MSH6P52701 1360 aa9.63□□□□□ -0.87
TCF4-246ENST00000570287 SH3BP5O60239 455 aa9.63□□□□□ -0.87
TCF4-246ENST00000570287 TMC7Q7Z402 723 aa9.63□□□□□ -0.87
TCF4-246ENST00000570287 GPATCH11Q8N954 259 aa9.63□□□□□ -0.87
TCF4-246ENST00000570287 PURBQ96QR8 312 aaKnown RBP9.63□□□□□ -0.87
TCF4-246ENST00000570287 MIS18AQ9NYP9 233 aa9.63□□□□□ -0.87
TCF4-246ENST00000570287 R3HCC1Q9Y3T6 440 aaKnown RBP9.63□□□□□ -0.87
TCF4-246ENST00000570287 CEP85Q6P2H3 762 aa9.62□□□□□ -0.87
TCF4-246ENST00000570287 TGIF2Q9GZN2 237 aa9.62□□□□□ -0.87
TCF4-246ENST00000570287 LMTK3Q96Q04 1460 aa9.62□□□□□ -0.87
TCF4-246ENST00000570287 MAP3K5Q99683 1374 aa9.62□□□□□ -0.87
TCF4-246ENST00000570287 CCT4P50991 539 aaKnown RBP9.62□□□□□ -0.87
TCF4-246ENST00000570287 RACK1P63244 317 aaKnown RBP9.62□□□□□ -0.87
TCF4-246ENST00000570287 KLHL40Q2TBA0 621 aa9.62□□□□□ -0.87
TCF4-246ENST00000570287 ZFYVE27Q5T4F4 411 aa9.62□□□□□ -0.87
TCF4-246ENST00000570287 NUTM2GQ5VZR2 741 aa9.62□□□□□ -0.87
TCF4-246ENST00000570287 ANKMY2Q8IV38 441 aa9.62□□□□□ -0.87
TCF4-246ENST00000570287 HSCBQ8IWL3 235 aa9.62□□□□□ -0.87
TCF4-246ENST00000570287 KANSL2Q9H9L4 492 aa9.62□□□□□ -0.87
TCF4-246ENST00000570287 DDX56Q9NY93 547 aaKnown RBP9.62□□□□□ -0.87
TCF4-246ENST00000570287 RBL2Q08999 1139 aa9.61□□□□□ -0.87
TCF4-246ENST00000570287 SASS6Q6UVJ0 657 aa9.61□□□□□ -0.87
TCF4-246ENST00000570287 DUSP9Q99956 384 aaKnown RBP9.61□□□□□ -0.87
TCF4-246ENST00000570287 ZHX1Q9UKY1 873 aaPredicted RBP9.61□□□□□ -0.87
TCF4-246ENST00000570287 ADGRL3Q9HAR2 1447 aa9.61□□□□□ -0.87
TCF4-246ENST00000570287 RHBDL3P58872 404 aa9.61□□□□□ -0.87
TCF4-246ENST00000570287 MCF2L2Q86YR7 1114 aa9.61□□□□□ -0.87
TCF4-246ENST00000570287 PLEKHM2Q8IWE5 1019 aa9.61□□□□□ -0.87
TCF4-246ENST00000570287 SYMPKQ92797 1274 aaKnown RBP9.61□□□□□ -0.87
TCF4-246ENST00000570287 STK31Q9BXU1 1019 aa9.61□□□□□ -0.87
TCF4-246ENST00000570287 LTN1O94822 1766 aa9.61□□□□□ -0.87
TCF4-246ENST00000570287 ZKSCAN5Q9Y2L8 839 aa9.61□□□□□ -0.87
TCF4-246ENST00000570287 CACNA1FO60840 1977 aa9.61□□□□□ -0.87
TCF4-246ENST00000570287 NFAT5O94916 1531 aa9.6□□□□□ -0.87
TCF4-246ENST00000570287 CDC45O75419 566 aa9.6□□□□□ -0.87
TCF4-246ENST00000570287 S100BP04271 92 aaPredicted RBP9.6□□□□□ -0.87
TCF4-246ENST00000570287 HSP90AB1P08238 724 aaKnown RBP9.6□□□□□ -0.87
TCF4-246ENST00000570287 SOX11P35716 441 aa9.6□□□□□ -0.87
TCF4-246ENST00000570287 AMPD3Q01432 767 aa9.6□□□□□ -0.87
TCF4-246ENST00000570287 CCDC30Q5VVM6 783 aa9.6□□□□□ -0.87
TCF4-246ENST00000570287 IP6K1Q92551 441 aa9.6□□□□□ -0.87
TCF4-246ENST00000570287 PHF12Q96QT6 1004 aa9.6□□□□□ -0.87
TCF4-246ENST00000570287 MEIS3Q99687 375 aa9.6□□□□□ -0.87
TCF4-246ENST00000570287 RPS6KL1Q9Y6S9 549 aa9.6□□□□□ -0.87
TCF4-246ENST00000570287 SETD1BQ9UPS6 1966 aaKnown RBP9.6□□□□□ -0.87
TCF4-246ENST00000570287 ADAMTSL3P82987 1691 aa9.6□□□□□ -0.87
TCF4-246ENST00000570287 FAM208AQ9UK61 1670 aaKnown RBP9.6□□□□□ -0.87
TCF4-246ENST00000570287 RCCD1A6NED2 376 aa9.6□□□□□ -0.87
TCF4-246ENST00000570287 C21orf2O43822 256 aa9.6□□□□□ -0.87
TCF4-246ENST00000570287 HMMRO75330 724 aa9.6□□□□□ -0.87
TCF4-246ENST00000570287 EVA1CP58658 441 aa9.6□□□□□ -0.87
TCF4-246ENST00000570287 AXDND1Q5T1B0 1012 aaPredicted RBP9.6□□□□□ -0.87
TCF4-246ENST00000570287 G2E3Q7L622 706 aa9.6□□□□□ -0.87
TCF4-246ENST00000570287 RNF34Q969K3 372 aa9.6□□□□□ -0.87
TCF4-246ENST00000570287 AKT1S1Q96B36 256 aa9.6□□□□□ -0.87
TCF4-246ENST00000570287 LETM1O95202 739 aaPredicted RBP9.59□□□□□ -0.87
TCF4-246ENST00000570287 MAPK8P45983 427 aa9.59□□□□□ -0.87
TCF4-246ENST00000570287 APLP1P51693 650 aa9.59□□□□□ -0.87
TCF4-246ENST00000570287 TAF7Q15545 349 aaPredicted RBP9.59□□□□□ -0.87
TCF4-246ENST00000570287 TSHZ1Q6ZSZ6 1077 aa9.59□□□□□ -0.87
TCF4-246ENST00000570287 C11orf96Q7Z7L8 435 aa9.59□□□□□ -0.87
TCF4-246ENST00000570287 RGL4Q8IZJ4 473 aa9.59□□□□□ -0.87
TCF4-246ENST00000570287 KCNH5Q8NCM2 988 aa9.59□□□□□ -0.87
TCF4-246ENST00000570287 IL17REQ8NFR9 667 aa9.59□□□□□ -0.87
TCF4-246ENST00000570287 ANP32BQ92688 251 aaKnown RBP9.59□□□□□ -0.87
TCF4-246ENST00000570287 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.59□□□□□ -0.87
TCF4-246ENST00000570287 PHRF1Q9P1Y6 1649 aaKnown RBP9.59□□□□□ -0.87
TCF4-246ENST00000570287 PPP4R3BQ5MIZ7 849 aa9.59□□□□□ -0.87
TCF4-246ENST00000570287 TTC22Q5TAA0 569 aa9.59□□□□□ -0.87
TCF4-246ENST00000570287 RPS6KC1Q96S38 1066 aa9.59□□□□□ -0.87
TCF4-246ENST00000570287 TTF2Q9UNY4 1162 aaKnown RBP9.59□□□□□ -0.87
TCF4-246ENST00000570287 GSPT1P15170 499 aaKnown RBP9.59□□□□□ -0.87
TCF4-246ENST00000570287 OGFOD1Q8N543 542 aa9.59□□□□□ -0.87
TCF4-246ENST00000570287 LTV1Q96GA3 475 aaPredicted RBP9.59□□□□□ -0.87
TCF4-246ENST00000570287 HDAC5Q9UQL6 1122 aa9.59□□□□□ -0.87
TCF4-246ENST00000570287 RNF187Q5TA31 235 aaPredicted RBP9.58□□□□□ -0.88
TCF4-246ENST00000570287 TSGA10IPQ3SY00 556 aa9.58□□□□□ -0.88
TCF4-246ENST00000570287 SLC4A10Q6U841 1118 aa9.58□□□□□ -0.88
TCF4-246ENST00000570287 ZSCAN29Q8IWY8 852 aaPredicted RBP9.58□□□□□ -0.88
TCF4-246ENST00000570287 GMLQ99445 158 aa9.58□□□□□ -0.88
TCF4-246ENST00000570287 MAGEC2Q9UBF1 373 aaPredicted RBP9.58□□□□□ -0.88
TCF4-246ENST00000570287 N4BP2Q86UW6 1770 aaPredicted RBP9.57□□□□□ -0.88
TCF4-246ENST00000570287 F6X3S4 739 aa9.57□□□□□ -0.88
TCF4-246ENST00000570287 GNAI2P04899 355 aa9.57□□□□□ -0.88
TCF4-246ENST00000570287 IRX3P78415 501 aaPredicted RBP9.57□□□□□ -0.88
TCF4-246ENST00000570287 CACNB1Q02641 598 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms