RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 ATP2B4P23634 1241 aa18.83■□□□□ 0.6
HERPUD1-219ENST00000570273 BMP2KLQ5H9B9 411 aa18.83■□□□□ 0.6
HERPUD1-219ENST00000570273 OLFM4Q6UX06 510 aa18.83■□□□□ 0.6
HERPUD1-219ENST00000570273 PODXL2Q9NZ53 605 aa18.83■□□□□ 0.6
HERPUD1-219ENST00000570273 SLX4Q8IY92 1834 aa18.82■□□□□ 0.6
HERPUD1-219ENST00000570273 ATP5JP18859 108 aa18.82■□□□□ 0.6
HERPUD1-219ENST00000570273 SYT17Q9BSW7 474 aa18.82■□□□□ 0.6
HERPUD1-219ENST00000570273 PIM2Q9P1W9 311 aa18.82■□□□□ 0.6
HERPUD1-219ENST00000570273 GOLGB1Q14789 3259 aaKnown RBP18.81■□□□□ 0.6
HERPUD1-219ENST00000570273 WTIPA6NIX2 430 aaPredicted RBP18.81■□□□□ 0.6
HERPUD1-219ENST00000570273 KLRK1P26718 216 aa18.81■□□□□ 0.6
HERPUD1-219ENST00000570273 DPP8Q6V1X1 898 aaPredicted RBP18.81■□□□□ 0.6
HERPUD1-219ENST00000570273 MPNDQ8N594 471 aa18.81■□□□□ 0.6
HERPUD1-219ENST00000570273 BOLA2Q9H3K6 86 aa18.81■□□□□ 0.6
HERPUD1-219ENST00000570273 LTBP1Q14766 1721 aa18.8■□□□□ 0.6
HERPUD1-219ENST00000570273 C6orf229H3BNL8 230 aa18.8■□□□□ 0.6
HERPUD1-219ENST00000570273 PHKA1P46020 1223 aa18.8■□□□□ 0.6
HERPUD1-219ENST00000570273 CCDC102BQ68D86 513 aa18.8■□□□□ 0.6
HERPUD1-219ENST00000570273 CC2D2BQ6DHV5 1058 aa18.8■□□□□ 0.6
HERPUD1-219ENST00000570273 TRIM6-TRIM34B2RNG4 842 aa18.79■□□□□ 0.6
HERPUD1-219ENST00000570273 C21orf2O43822 256 aa18.79■□□□□ 0.6
HERPUD1-219ENST00000570273 MAP4K4O95819 1239 aaPredicted RBP18.79■□□□□ 0.6
HERPUD1-219ENST00000570273 UQCRFS1P1P0C7P4 283 aa18.79■□□□□ 0.6
HERPUD1-219ENST00000570273 GYG1P46976 350 aa18.79■□□□□ 0.6
HERPUD1-219ENST00000570273 BCAMP50895 628 aa18.79■□□□□ 0.6
HERPUD1-219ENST00000570273 CAVIN4Q5BKX8 364 aa18.79■□□□□ 0.6
HERPUD1-219ENST00000570273 DALRD3Q5D0E6 543 aaKnown RBP18.79■□□□□ 0.6
HERPUD1-219ENST00000570273 VPS37DQ86XT2 251 aa18.79■□□□□ 0.6
HERPUD1-219ENST00000570273 NLGN2Q8NFZ4 835 aa18.79■□□□□ 0.6
HERPUD1-219ENST00000570273 TBC1D16Q8TBP0 767 aa18.79■□□□□ 0.6
HERPUD1-219ENST00000570273 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.79■□□□□ 0.6
HERPUD1-219ENST00000570273 C7orf43Q8WVR3 580 aa18.79■□□□□ 0.6
HERPUD1-219ENST00000570273 GPR101Q96P66 508 aaPredicted RBP18.79■□□□□ 0.6
HERPUD1-219ENST00000570273 WWC3Q9ULE0 1092 aa18.79■□□□□ 0.6
HERPUD1-219ENST00000570273 DUOX1Q9NRD9 1551 aa18.78■□□□□ 0.6
HERPUD1-219ENST00000570273 CCDC93Q567U6 631 aa18.78■□□□□ 0.6
HERPUD1-219ENST00000570273 DNAJC2Q99543 621 aaKnown RBP18.78■□□□□ 0.6
HERPUD1-219ENST00000570273 POLLQ9UGP5 575 aa18.78■□□□□ 0.6
HERPUD1-219ENST00000570273 BRCA1P38398 1863 aaKnown RBP18.78■□□□□ 0.6
HERPUD1-219ENST00000570273 SDSP20132 328 aa18.77■□□□□ 0.6
HERPUD1-219ENST00000570273 ARID4AP29374 1257 aaPredicted RBP18.77■□□□□ 0.6
HERPUD1-219ENST00000570273 C15orf52Q6ZUT6 534 aaKnown RBP18.77■□□□□ 0.6
HERPUD1-219ENST00000570273 RILPL2Q969X0 211 aa18.77■□□□□ 0.6
HERPUD1-219ENST00000570273 ZNF512BQ96KM6 892 aaPredicted RBP18.77■□□□□ 0.6
HERPUD1-219ENST00000570273 HAUS7Q99871 368 aa18.77■□□□□ 0.6
HERPUD1-219ENST00000570273 GNL3LQ9NVN8 582 aaKnown RBP18.77■□□□□ 0.6
HERPUD1-219ENST00000570273 IRS2Q9Y4H2 1338 aa18.77■□□□□ 0.6
HERPUD1-219ENST00000570273 MED23Q9ULK4 1368 aa18.77■□□□□ 0.59
HERPUD1-219ENST00000570273 SOGA3Q5TF21 947 aa18.76■□□□□ 0.59
HERPUD1-219ENST00000570273 CNTROBQ8N137 903 aa18.76■□□□□ 0.59
HERPUD1-219ENST00000570273 FAM84BQ96KN1 310 aaPredicted RBP18.76■□□□□ 0.59
HERPUD1-219ENST00000570273 HIBADHP31937 336 aaKnown RBP18.75■□□□□ 0.59
HERPUD1-219ENST00000570273 MCAMP43121 646 aa18.75■□□□□ 0.59
HERPUD1-219ENST00000570273 SCARF1Q14162 830 aa18.75■□□□□ 0.59
HERPUD1-219ENST00000570273 ZNF804AQ7Z570 1209 aa18.75■□□□□ 0.59
HERPUD1-219ENST00000570273 FBXO33Q7Z6M2 555 aa18.75■□□□□ 0.59
HERPUD1-219ENST00000570273 TXNRD3Q86VQ6 643 aa18.75■□□□□ 0.59
HERPUD1-219ENST00000570273 EYA3Q99504 573 aa18.75■□□□□ 0.59
HERPUD1-219ENST00000570273 SNRKQ9NRH2 765 aa18.75■□□□□ 0.59
HERPUD1-219ENST00000570273 NDUFB9Q9Y6M9 179 aa18.75■□□□□ 0.59
HERPUD1-219ENST00000570273 SNED1Q8TER0 1413 aa18.75■□□□□ 0.59
HERPUD1-219ENST00000570273 UTRNP46939 3433 aa18.75■□□□□ 0.59
HERPUD1-219ENST00000570273 RASGRF1Q13972 1273 aa18.74■□□□□ 0.59
HERPUD1-219ENST00000570273 GRIPAP1Q4V328 841 aa18.74■□□□□ 0.59
HERPUD1-219ENST00000570273 BCS1LQ9Y276 419 aa18.74■□□□□ 0.59
HERPUD1-219ENST00000570273 GOLIM4O00461 696 aa18.74■□□□□ 0.59
HERPUD1-219ENST00000570273 CDC45O75419 566 aa18.74■□□□□ 0.59
HERPUD1-219ENST00000570273 FKBP4Q02790 459 aaKnown RBP eCLIP18.74■□□□□ 0.59
HERPUD1-219ENST00000570273 PI16Q6UXB8 463 aa18.74■□□□□ 0.59
HERPUD1-219ENST00000570273 RTKN2Q8IZC4 609 aa18.74■□□□□ 0.59
HERPUD1-219ENST00000570273 EVI5LQ96CN4 794 aa18.74■□□□□ 0.59
HERPUD1-219ENST00000570273 EDC3Q96F86 508 aaKnown RBP18.74■□□□□ 0.59
HERPUD1-219ENST00000570273 PAG1Q9NWQ8 432 aa18.74■□□□□ 0.59
HERPUD1-219ENST00000570273 IQSEC3Q9UPP2 1182 aaPredicted RBP18.74■□□□□ 0.59
HERPUD1-219ENST00000570273 RIMBP2O15034 1052 aa18.73■□□□□ 0.59
HERPUD1-219ENST00000570273 FRAT2O75474 233 aaPredicted RBP18.73■□□□□ 0.59
HERPUD1-219ENST00000570273 ZAP70P43403 619 aa18.73■□□□□ 0.59
HERPUD1-219ENST00000570273 SPATA5Q8NB90 893 aa18.73■□□□□ 0.59
HERPUD1-219ENST00000570273 SUPT20HQ8NEM7 779 aa18.73■□□□□ 0.59
HERPUD1-219ENST00000570273 RTFDC1Q9BY42 306 aaPredicted RBP18.73■□□□□ 0.59
HERPUD1-219ENST00000570273 HMG20BQ9P0W2 317 aa18.73■□□□□ 0.59
HERPUD1-219ENST00000570273 SEMA3EO15041 775 aa18.72■□□□□ 0.59
HERPUD1-219ENST00000570273 FSD1Q9BTV5 496 aa18.72■□□□□ 0.59
HERPUD1-219ENST00000570273 ZC3H12CQ9C0D7 883 aaKnown RBP18.72■□□□□ 0.59
HERPUD1-219ENST00000570273 COL1A1P02452 1464 aaPredicted RBP18.72■□□□□ 0.59
HERPUD1-219ENST00000570273 WASHC4Q2M389 1173 aa18.71■□□□□ 0.59
HERPUD1-219ENST00000570273 C8orf34Q49A92 452 aa18.71■□□□□ 0.59
HERPUD1-219ENST00000570273 DENND2AQ9ULE3 1009 aa18.71■□□□□ 0.59
HERPUD1-219ENST00000570273 PSMD1Q99460 953 aa18.7■□□□□ 0.58
HERPUD1-219ENST00000570273 G3V3G9 751 aa18.69■□□□□ 0.58
HERPUD1-219ENST00000570273 CHAF1AQ13111 956 aaPredicted RBP18.69■□□□□ 0.58
HERPUD1-219ENST00000570273 DCAF8Q5TAQ9 597 aa18.69■□□□□ 0.58
HERPUD1-219ENST00000570273 CASC1Q6TDU7 716 aa18.69■□□□□ 0.58
HERPUD1-219ENST00000570273 TBC1D9Q6ZT07 1266 aa18.69■□□□□ 0.58
HERPUD1-219ENST00000570273 KBTBD3Q8NAB2 608 aa18.69■□□□□ 0.58
HERPUD1-219ENST00000570273 COA1Q9GZY4 146 aa18.69■□□□□ 0.58
HERPUD1-219ENST00000570273 ANTXR1Q9H6X2 564 aa18.69■□□□□ 0.58
HERPUD1-219ENST00000570273 CD209Q9NNX6 404 aa18.69■□□□□ 0.58
HERPUD1-219ENST00000570273 RFX7Q2KHR2 1363 aa18.68■□□□□ 0.58
HERPUD1-219ENST00000570273 PDS5AQ29RF7 1337 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms