RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 INTS5Q6P9B9 1019 aaKnown RBP7.2□□□□□ -1.26
CYLD-216ENST00000569891 BLOC1S2Q6QNY1 142 aa7.2□□□□□ -1.26
CYLD-216ENST00000569891 TMC4Q7Z404 712 aa7.2□□□□□ -1.26
CYLD-216ENST00000569891 ANKRD31Q8N7Z5 1873 aa7.2□□□□□ -1.26
CYLD-216ENST00000569891 CAMTA2O94983 1202 aa7.19□□□□□ -1.26
CYLD-216ENST00000569891 EPHA10Q5JZY3 1008 aa7.19□□□□□ -1.26
CYLD-216ENST00000569891 RNF113AO15541 343 aaKnown RBP7.19□□□□□ -1.26
CYLD-216ENST00000569891 NBR1Q14596 966 aa7.19□□□□□ -1.26
CYLD-216ENST00000569891 NACAP1Q9BZK3 213 aa7.19□□□□□ -1.26
CYLD-216ENST00000569891 SEMA3EO15041 775 aa7.19□□□□□ -1.26
CYLD-216ENST00000569891 WASHC4Q2M389 1173 aa7.19□□□□□ -1.26
CYLD-216ENST00000569891 CERS3Q8IU89 383 aa7.19□□□□□ -1.26
CYLD-216ENST00000569891 ZGPATQ8N5A5 531 aaKnown RBP7.19□□□□□ -1.26
CYLD-216ENST00000569891 IL17RAQ96F46 866 aa7.19□□□□□ -1.26
CYLD-216ENST00000569891 DBNDD2Q9BQY9 259 aa7.19□□□□□ -1.26
CYLD-216ENST00000569891 SPEF2Q9C093 1822 aa7.19□□□□□ -1.26
CYLD-216ENST00000569891 ZNF609O15014 1411 aa7.19□□□□□ -1.26
CYLD-216ENST00000569891 PDE8BO95263 885 aa7.19□□□□□ -1.26
CYLD-216ENST00000569891 GNAT2P19087 354 aa7.19□□□□□ -1.26
CYLD-216ENST00000569891 DSCC1Q9BVC3 393 aa7.19□□□□□ -1.26
CYLD-216ENST00000569891 DBNLQ9UJU6 430 aaKnown RBP7.19□□□□□ -1.26
CYLD-216ENST00000569891 AK9Q5TCS8 1911 aa7.19□□□□□ -1.26
CYLD-216ENST00000569891 FRAT2O75474 233 aaPredicted RBP7.18□□□□□ -1.26
CYLD-216ENST00000569891 NT5C2P49902 561 aa7.18□□□□□ -1.26
CYLD-216ENST00000569891 IMMTQ16891 758 aaKnown RBP7.18□□□□□ -1.26
CYLD-216ENST00000569891 XAGE2Q96GT9 111 aa7.18□□□□□ -1.26
CYLD-216ENST00000569891 NOL10Q9BSC4 688 aaKnown RBP7.18□□□□□ -1.26
CYLD-216ENST00000569891 LIMCH1Q9UPQ0 1083 aa7.18□□□□□ -1.26
CYLD-216ENST00000569891 MAP4K4O95819 1239 aaPredicted RBP7.18□□□□□ -1.26
CYLD-216ENST00000569891 FKBP4Q02790 459 aaKnown RBP eCLIP7.18□□□□□ -1.26
CYLD-216ENST00000569891 NMIQ13287 307 aaPredicted RBP7.18□□□□□ -1.26
CYLD-216ENST00000569891 UBE4AQ14139 1066 aa7.18□□□□□ -1.26
CYLD-216ENST00000569891 HLFQ16534 295 aa7.18□□□□□ -1.26
CYLD-216ENST00000569891 VPS53Q5VIR6 699 aa7.18□□□□□ -1.26
CYLD-216ENST00000569891 SPTY2D1Q68D10 685 aaPredicted RBP7.18□□□□□ -1.26
CYLD-216ENST00000569891 CDK5RAP2Q96SN8 1893 aa7.18□□□□□ -1.26
CYLD-216ENST00000569891 GOLIM4O00461 696 aa7.18□□□□□ -1.26
CYLD-216ENST00000569891 SF3B3Q15393 1217 aaKnown RBP7.18□□□□□ -1.26
CYLD-216ENST00000569891 TSHZ3Q63HK5 1081 aa7.18□□□□□ -1.26
CYLD-216ENST00000569891 CPLX2Q6PUV4 134 aaKnown RBP7.18□□□□□ -1.26
CYLD-216ENST00000569891 RALYLQ86SE5 291 aaKnown RBP7.18□□□□□ -1.26
CYLD-216ENST00000569891 JARID2Q92833 1246 aaPredicted RBP7.18□□□□□ -1.26
CYLD-216ENST00000569891 SNRKQ9NRH2 765 aa7.18□□□□□ -1.26
CYLD-216ENST00000569891 PDRG1Q9NUG6 133 aa7.18□□□□□ -1.26
CYLD-216ENST00000569891 DHX16O60231 1041 aaKnown RBP7.18□□□□□ -1.26
CYLD-216ENST00000569891 SLC10A5Q5PT55 438 aa7.18□□□□□ -1.26
CYLD-216ENST00000569891 ATG9AQ7Z3C6 839 aa7.18□□□□□ -1.26
CYLD-216ENST00000569891 AMOTL1Q8IY63 956 aa7.18□□□□□ -1.26
CYLD-216ENST00000569891 APPBP2Q92624 585 aa7.18□□□□□ -1.26
CYLD-216ENST00000569891 CARMIL3Q8ND23 1372 aa7.17□□□□□ -1.26
CYLD-216ENST00000569891 ITPK1Q13572 414 aa7.17□□□□□ -1.26
CYLD-216ENST00000569891 RPGRQ92834 1020 aaKnown RBP7.17□□□□□ -1.26
CYLD-216ENST00000569891 SMC3Q9UQE7 1217 aa7.17□□□□□ -1.26
CYLD-216ENST00000569891 RBM8AQ9Y5S9 174 aaKnown RBP7.17□□□□□ -1.26
CYLD-216ENST00000569891 RPAP1Q9BWH6 1393 aaPredicted RBP7.17□□□□□ -1.26
CYLD-216ENST00000569891 SLC4A3P48751 1232 aa7.17□□□□□ -1.26
CYLD-216ENST00000569891 SF3B2Q13435 895 aaKnown RBP7.17□□□□□ -1.26
CYLD-216ENST00000569891 NFKBIBQ15653 356 aa7.17□□□□□ -1.26
CYLD-216ENST00000569891 SYAP1Q96A49 352 aaPredicted RBP7.17□□□□□ -1.26
CYLD-216ENST00000569891 JAKMIP1Q96N16 626 aaKnown RBP7.17□□□□□ -1.26
CYLD-216ENST00000569891 DENND2AQ9ULE3 1009 aa7.17□□□□□ -1.26
CYLD-216ENST00000569891 ISY1Q9ULR0 285 aaKnown RBP7.17□□□□□ -1.26
CYLD-216ENST00000569891 WDR33Q9C0J8 1336 aaKnown RBP7.17□□□□□ -1.26
CYLD-216ENST00000569891 CACNA1SQ13698 1873 aa7.17□□□□□ -1.26
CYLD-216ENST00000569891 NHSQ6T4R5 1651 aa7.17□□□□□ -1.26
CYLD-216ENST00000569891 SUSD4Q5VX71 490 aa7.17□□□□□ -1.26
CYLD-216ENST00000569891 CNBD1Q8NA66 436 aa7.17□□□□□ -1.26
CYLD-216ENST00000569891 KLHDC4Q8TBB5 520 aa7.17□□□□□ -1.26
CYLD-216ENST00000569891 LSG1Q9H089 658 aaKnown RBP7.17□□□□□ -1.26
CYLD-216ENST00000569891 GREM2Q9H772 168 aa7.17□□□□□ -1.26
CYLD-216ENST00000569891 FAM177BA6PVY3 158 aa7.16□□□□□ -1.26
CYLD-216ENST00000569891 MAP4K1Q92918 833 aa7.16□□□□□ -1.26
CYLD-216ENST00000569891 RIPOR2Q9Y4F9 1068 aa7.16□□□□□ -1.26
CYLD-216ENST00000569891 NTSR2O95665 410 aa7.16□□□□□ -1.26
CYLD-216ENST00000569891 UBE3CQ15386 1083 aa7.16□□□□□ -1.26
CYLD-216ENST00000569891 PRPF40BQ6NWY9 871 aaKnown RBP7.16□□□□□ -1.26
CYLD-216ENST00000569891 SLF2Q8IX21 1173 aa7.16□□□□□ -1.26
CYLD-216ENST00000569891 SLC4A9Q96Q91 983 aa7.16□□□□□ -1.26
CYLD-216ENST00000569891 BSDC1Q9NW68 430 aaPredicted RBP7.16□□□□□ -1.26
CYLD-216ENST00000569891 SLC3A2P08195 630 aaKnown RBP7.16□□□□□ -1.26
CYLD-216ENST00000569891 CASTP20810 708 aaKnown RBP7.16□□□□□ -1.26
CYLD-216ENST00000569891 SART3Q15020 963 aaKnown RBP7.16□□□□□ -1.26
CYLD-216ENST00000569891 TSGA10IPQ3SY00 556 aa7.16□□□□□ -1.26
CYLD-216ENST00000569891 L1TD1Q5T7N2 865 aaKnown RBP7.16□□□□□ -1.26
CYLD-216ENST00000569891 RBM17Q96I25 401 aaKnown RBP7.16□□□□□ -1.26
CYLD-216ENST00000569891 DCAF8L1A6NGE4 600 aa7.16□□□□□ -1.26
CYLD-216ENST00000569891 RXRBP28702 533 aa7.16□□□□□ -1.26
CYLD-216ENST00000569891 TIMM10P62072 90 aa7.16□□□□□ -1.26
CYLD-216ENST00000569891 LRRC24Q50LG9 513 aa7.16□□□□□ -1.26
CYLD-216ENST00000569891 ZMYM1Q5SVZ6 1142 aa7.16□□□□□ -1.26
CYLD-216ENST00000569891 CREB3L3Q68CJ9 461 aa7.16□□□□□ -1.26
CYLD-216ENST00000569891 NLGN1Q8N2Q7 840 aa7.16□□□□□ -1.26
CYLD-216ENST00000569891 LINC00116Q8NCU8 138 aa7.16□□□□□ -1.26
CYLD-216ENST00000569891 ANP32BQ92688 251 aaKnown RBP7.16□□□□□ -1.26
CYLD-216ENST00000569891 AIDAQ96BJ3 306 aa7.16□□□□□ -1.26
CYLD-216ENST00000569891 ALDH8A1Q9H2A2 487 aaPredicted RBP7.16□□□□□ -1.26
CYLD-216ENST00000569891 RNF41Q9H4P4 317 aaPredicted RBP7.16□□□□□ -1.26
CYLD-216ENST00000569891 KCNQ2O43526 872 aa7.15□□□□□ -1.26
CYLD-216ENST00000569891 ZNF594Q96JF6 807 aaPredicted RBP7.15□□□□□ -1.26
CYLD-216ENST00000569891 RPS8P62241 208 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms