RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 SASH1O94885 1247 aa15.56■□□□□ 0.08
CAPN3-220ENST00000569827 ATP2B4P23634 1241 aa15.56■□□□□ 0.08
CAPN3-220ENST00000569827 KLRK1P26718 216 aa15.56■□□□□ 0.08
CAPN3-220ENST00000569827 G2E3Q7L622 706 aa15.56■□□□□ 0.08
CAPN3-220ENST00000569827 USP17L1Q7RTZ2 530 aa15.56■□□□□ 0.08
CAPN3-220ENST00000569827 TXNRD3Q86VQ6 643 aa15.56■□□□□ 0.08
CAPN3-220ENST00000569827 PI4KAP1Q8N8J0 262 aa15.56■□□□□ 0.08
CAPN3-220ENST00000569827 SAGE1Q9NXZ1 904 aa15.56■□□□□ 0.08
CAPN3-220ENST00000569827 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.56■□□□□ 0.08
CAPN3-220ENST00000569827 CENPFP49454 3210 aa15.55■□□□□ 0.08
CAPN3-220ENST00000569827 MED23Q9ULK4 1368 aa15.55■□□□□ 0.08
CAPN3-220ENST00000569827 DDX58O95786 925 aaKnown RBP15.55■□□□□ 0.08
CAPN3-220ENST00000569827 TTLL11Q8NHH1 800 aa15.55■□□□□ 0.08
CAPN3-220ENST00000569827 MINPP1Q9UNW1 487 aa15.55■□□□□ 0.08
CAPN3-220ENST00000569827 HSP90B1P14625 803 aaKnown RBP15.54■□□□□ 0.08
CAPN3-220ENST00000569827 PRKG1Q13976 671 aa15.54■□□□□ 0.08
CAPN3-220ENST00000569827 TTLL12Q14166 644 aaPredicted RBP15.54■□□□□ 0.08
CAPN3-220ENST00000569827 CCDC184Q52MB2 194 aa15.54■□□□□ 0.08
CAPN3-220ENST00000569827 CCDC30Q5VVM6 783 aa15.54■□□□□ 0.08
CAPN3-220ENST00000569827 UBE3BQ7Z3V4 1068 aa15.54■□□□□ 0.08
CAPN3-220ENST00000569827 CDC5LQ99459 802 aaKnown RBP15.54■□□□□ 0.08
CAPN3-220ENST00000569827 FZD1Q9UP38 647 aa15.54■□□□□ 0.08
CAPN3-220ENST00000569827 TBC1D8O95759 1140 aa15.53■□□□□ 0.08
CAPN3-220ENST00000569827 CCT4P50991 539 aaKnown RBP15.53■□□□□ 0.08
CAPN3-220ENST00000569827 DACT2Q5SW24 774 aa15.53■□□□□ 0.08
CAPN3-220ENST00000569827 KSR2Q6VAB6 950 aa15.53■□□□□ 0.08
CAPN3-220ENST00000569827 OTOFQ9HC10 1997 aa15.53■□□□□ 0.08
CAPN3-220ENST00000569827 HTTP42858 3142 aa15.52■□□□□ 0.08
CAPN3-220ENST00000569827 PITPNM2Q9BZ72 1349 aa15.52■□□□□ 0.08
CAPN3-220ENST00000569827 NEURL1BA8MQ27 555 aa15.52■□□□□ 0.08
CAPN3-220ENST00000569827 PODNQ7Z5L7 613 aa15.52■□□□□ 0.08
CAPN3-220ENST00000569827 SNAP23O00161 211 aa15.51■□□□□ 0.07
CAPN3-220ENST00000569827 WNT10BO00744 389 aa15.51■□□□□ 0.07
CAPN3-220ENST00000569827 CALD1Q05682 793 aaKnown RBP15.51■□□□□ 0.07
CAPN3-220ENST00000569827 CTU1Q7Z7A3 348 aaKnown RBP15.51■□□□□ 0.07
CAPN3-220ENST00000569827 KIAA0825Q8IV33 1275 aa15.51■□□□□ 0.07
CAPN3-220ENST00000569827 BSDC1Q9NW68 430 aaPredicted RBP15.51■□□□□ 0.07
CAPN3-220ENST00000569827 PCDHAC2Q9Y5I4 1007 aa15.51■□□□□ 0.07
CAPN3-220ENST00000569827 MKI67P46013 3256 aaKnown RBP15.51■□□□□ 0.07
CAPN3-220ENST00000569827 LAMB1P07942 1786 aa15.5■□□□□ 0.07
CAPN3-220ENST00000569827 ITGA6P23229 1130 aa15.49■□□□□ 0.07
CAPN3-220ENST00000569827 NEXNQ0ZGT2 675 aa15.49■□□□□ 0.07
CAPN3-220ENST00000569827 ZNF296Q8WUU4 475 aaPredicted RBP15.49■□□□□ 0.07
CAPN3-220ENST00000569827 STK31Q9BXU1 1019 aa15.49■□□□□ 0.07
CAPN3-220ENST00000569827 R3HDMLQ9H3Y0 253 aa15.49■□□□□ 0.07
CAPN3-220ENST00000569827 HPS5Q9UPZ3 1129 aa15.49■□□□□ 0.07
CAPN3-220ENST00000569827 ZNF804BA4D1E1 1349 aa15.48■□□□□ 0.07
CAPN3-220ENST00000569827 SLC4A2P04920 1241 aa15.48■□□□□ 0.07
CAPN3-220ENST00000569827 IGHMBP2P38935 993 aaKnown RBP15.48■□□□□ 0.07
CAPN3-220ENST00000569827 FKBP1BP68106 108 aa15.48■□□□□ 0.07
CAPN3-220ENST00000569827 GTF2IP78347 998 aa15.48■□□□□ 0.07
CAPN3-220ENST00000569827 PTPN12Q05209 780 aaKnown RBP15.48■□□□□ 0.07
CAPN3-220ENST00000569827 TWISTNBQ3B726 338 aaPredicted RBP15.48■□□□□ 0.07
CAPN3-220ENST00000569827 HELBQ8NG08 1087 aaPredicted RBP15.48■□□□□ 0.07
CAPN3-220ENST00000569827 HDAC9Q9UKV0 1011 aa15.48■□□□□ 0.07
CAPN3-220ENST00000569827 JAG2Q9Y219 1238 aa15.48■□□□□ 0.07
CAPN3-220ENST00000569827 KIAA0100Q14667 2235 aaKnown RBP15.48■□□□□ 0.07
CAPN3-220ENST00000569827 BRCA2P51587 3418 aa15.48■□□□□ 0.07
CAPN3-220ENST00000569827 SSC5DA1L4H1 1573 aa15.47■□□□□ 0.07
CAPN3-220ENST00000569827 H7C1W4 665 aa15.47■□□□□ 0.07
CAPN3-220ENST00000569827 STRIP1Q5VSL9 837 aa15.47■□□□□ 0.07
CAPN3-220ENST00000569827 TTLL5Q6EMB2 1281 aa15.47■□□□□ 0.07
CAPN3-220ENST00000569827 OGFOD1Q8N543 542 aa15.47■□□□□ 0.07
CAPN3-220ENST00000569827 ARAP2Q8WZ64 1704 aa15.47■□□□□ 0.07
CAPN3-220ENST00000569827 COA1Q9GZY4 146 aa15.47■□□□□ 0.07
CAPN3-220ENST00000569827 SALL2Q9Y467 1007 aaPredicted RBP15.47■□□□□ 0.07
CAPN3-220ENST00000569827 AOX1Q06278 1338 aa15.46■□□□□ 0.07
CAPN3-220ENST00000569827 F8W031 263 aaPredicted RBP15.46■□□□□ 0.07
CAPN3-220ENST00000569827 TAF5LO75529 589 aa15.46■□□□□ 0.07
CAPN3-220ENST00000569827 KCNJ4P48050 445 aa15.46■□□□□ 0.07
CAPN3-220ENST00000569827 CASP7P55210 303 aa15.46■□□□□ 0.07
CAPN3-220ENST00000569827 CHRNDQ07001 517 aa15.46■□□□□ 0.07
CAPN3-220ENST00000569827 GCKRQ14397 625 aa15.46■□□□□ 0.07
CAPN3-220ENST00000569827 MYO3BQ8WXR4 1341 aa15.45■□□□□ 0.06
CAPN3-220ENST00000569827 FLIIQ13045 1269 aa15.45■□□□□ 0.06
CAPN3-220ENST00000569827 FKBP5Q13451 457 aaPredicted RBP15.45■□□□□ 0.06
CAPN3-220ENST00000569827 WWC1Q8IX03 1113 aa15.45■□□□□ 0.06
CAPN3-220ENST00000569827 CERS5Q8N5B7 392 aa15.45■□□□□ 0.06
CAPN3-220ENST00000569827 MPHOSPH8Q99549 860 aa15.45■□□□□ 0.06
CAPN3-220ENST00000569827 ANGEL1Q9UNK9 670 aaKnown RBP15.45■□□□□ 0.06
CAPN3-220ENST00000569827 LEMD3Q9Y2U8 911 aa15.45■□□□□ 0.06
CAPN3-220ENST00000569827 CLRN2A0PK11 232 aa15.44■□□□□ 0.06
CAPN3-220ENST00000569827 F6X3S4 739 aa15.44■□□□□ 0.06
CAPN3-220ENST00000569827 GPR25O00155 361 aa15.44■□□□□ 0.06
CAPN3-220ENST00000569827 NF2P35240 595 aa15.44■□□□□ 0.06
CAPN3-220ENST00000569827 CLMNQ96JQ2 1002 aa15.44■□□□□ 0.06
CAPN3-220ENST00000569827 CHMP3Q9Y3E7 222 aa15.44■□□□□ 0.06
CAPN3-220ENST00000569827 ZSWIM8A7E2V4 1837 aa15.44■□□□□ 0.06
CAPN3-220ENST00000569827 MYH13Q9UKX3 1938 aa15.43■□□□□ 0.06
CAPN3-220ENST00000569827 TM4SF4P48230 202 aa15.43■□□□□ 0.06
CAPN3-220ENST00000569827 ARMC9Q7Z3E5 817 aa15.43■□□□□ 0.06
CAPN3-220ENST00000569827 APOBEC3FQ8IUX4 373 aaKnown RBP15.43■□□□□ 0.06
CAPN3-220ENST00000569827 REM2Q8IYK8 340 aaPredicted RBP15.43■□□□□ 0.06
CAPN3-220ENST00000569827 DNAAF4Q8WXU2 420 aa15.43■□□□□ 0.06
CAPN3-220ENST00000569827 ZBED3Q96IU2 234 aaPredicted RBP15.43■□□□□ 0.06
CAPN3-220ENST00000569827 ZNF594Q96JF6 807 aaPredicted RBP15.43■□□□□ 0.06
CAPN3-220ENST00000569827 PLA2G12BQ9BX93 195 aa15.43■□□□□ 0.06
CAPN3-220ENST00000569827 CD209Q9NNX6 404 aa15.43■□□□□ 0.06
CAPN3-220ENST00000569827 FANCIQ9NVI1 1328 aa15.43■□□□□ 0.06
CAPN3-220ENST00000569827 IRS2Q9Y4H2 1338 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms