RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 KCNJ4P48050 445 aa13.86□□□□□ -0.19
SHCBP1-207ENST00000569702 PTPN12Q05209 780 aaKnown RBP13.86□□□□□ -0.19
SHCBP1-207ENST00000569702 LRRC24Q50LG9 513 aa13.86□□□□□ -0.19
SHCBP1-207ENST00000569702 DZIP1LQ8IYY4 767 aaKnown RBP13.86□□□□□ -0.19
SHCBP1-207ENST00000569702 CNOT7Q9UIV1 285 aaKnown RBP13.86□□□□□ -0.19
SHCBP1-207ENST00000569702 ZNF609O15014 1411 aa13.86□□□□□ -0.19
SHCBP1-207ENST00000569702 MROH5Q6ZUA9 1318 aa13.86□□□□□ -0.19
SHCBP1-207ENST00000569702 USP17L3A6NCW0 530 aa13.85□□□□□ -0.19
SHCBP1-207ENST00000569702 USP17L4A6NCW7 530 aa13.85□□□□□ -0.19
SHCBP1-207ENST00000569702 PLIN1O60240 522 aa13.85□□□□□ -0.19
SHCBP1-207ENST00000569702 RLBP1P12271 317 aa13.85□□□□□ -0.19
SHCBP1-207ENST00000569702 MTX1Q13505 466 aa13.85□□□□□ -0.19
SHCBP1-207ENST00000569702 UBE4AQ14139 1066 aa13.85□□□□□ -0.19
SHCBP1-207ENST00000569702 USP17L1Q7RTZ2 530 aa13.85□□□□□ -0.19
SHCBP1-207ENST00000569702 VGLL2Q8N8G2 317 aa13.85□□□□□ -0.19
SHCBP1-207ENST00000569702 GMLQ99445 158 aa13.85□□□□□ -0.19
SHCBP1-207ENST00000569702 PSME4Q14997 1843 aa13.85□□□□□ -0.19
SHCBP1-207ENST00000569702 SHTN1A0MZ66 631 aa13.84□□□□□ -0.19
SHCBP1-207ENST00000569702 EYA2O00167 538 aa13.84□□□□□ -0.19
SHCBP1-207ENST00000569702 ITGBL1O95965 494 aaPredicted RBP13.84□□□□□ -0.19
SHCBP1-207ENST00000569702 APLP1P51693 650 aa13.84□□□□□ -0.19
SHCBP1-207ENST00000569702 DACT2Q5SW24 774 aa13.84□□□□□ -0.19
SHCBP1-207ENST00000569702 STRIP1Q5VSL9 837 aa13.84□□□□□ -0.19
SHCBP1-207ENST00000569702 RSBN1LQ6PCB5 846 aaPredicted RBP13.84□□□□□ -0.19
SHCBP1-207ENST00000569702 MICALL2Q8IY33 904 aa13.84□□□□□ -0.19
SHCBP1-207ENST00000569702 FTSJ3Q8IY81 847 aaKnown RBP13.84□□□□□ -0.19
SHCBP1-207ENST00000569702 AGBL3Q8NEM8 1001 aa13.84□□□□□ -0.19
SHCBP1-207ENST00000569702 CD209Q9NNX6 404 aa13.84□□□□□ -0.19
SHCBP1-207ENST00000569702 FBXO3Q9UK99 471 aa13.84□□□□□ -0.19
SHCBP1-207ENST00000569702 RCAN3Q9UKA8 241 aa13.84□□□□□ -0.19
SHCBP1-207ENST00000569702 CLEC11AQ9Y240 323 aa13.84□□□□□ -0.19
SHCBP1-207ENST00000569702 H7C1D1 291 aa13.83□□□□□ -0.2
SHCBP1-207ENST00000569702 PDE8BO95263 885 aa13.83□□□□□ -0.2
SHCBP1-207ENST00000569702 GNAI2P04899 355 aa13.83□□□□□ -0.2
SHCBP1-207ENST00000569702 IL1R1P14778 569 aa13.83□□□□□ -0.2
SHCBP1-207ENST00000569702 HIRAP54198 1017 aaPredicted RBP13.83□□□□□ -0.2
SHCBP1-207ENST00000569702 METTL24Q5JXM2 366 aa13.83□□□□□ -0.2
SHCBP1-207ENST00000569702 ATG9AQ7Z3C6 839 aa13.83□□□□□ -0.2
SHCBP1-207ENST00000569702 COPRSQ9NQ92 184 aa13.83□□□□□ -0.2
SHCBP1-207ENST00000569702 PGAP2Q9UHJ9 254 aa13.83□□□□□ -0.2
SHCBP1-207ENST00000569702 ZBTB7BO15156 539 aaPredicted RBP13.82□□□□□ -0.2
SHCBP1-207ENST00000569702 CIAO1O76071 339 aa13.82□□□□□ -0.2
SHCBP1-207ENST00000569702 ZNF280AP59817 542 aaPredicted RBP13.82□□□□□ -0.2
SHCBP1-207ENST00000569702 MAP1SQ66K74 1059 aaPredicted RBP13.82□□□□□ -0.2
SHCBP1-207ENST00000569702 ZNF804AQ7Z570 1209 aa13.82□□□□□ -0.2
SHCBP1-207ENST00000569702 CNTROBQ8N137 903 aa13.82□□□□□ -0.2
SHCBP1-207ENST00000569702 TRPM4Q8TD43 1214 aa13.82□□□□□ -0.2
SHCBP1-207ENST00000569702 ZC3H15Q8WU90 426 aaKnown RBP13.82□□□□□ -0.2
SHCBP1-207ENST00000569702 ZNF646O15015 1829 aaPredicted RBP13.82□□□□□ -0.2
SHCBP1-207ENST00000569702 PASKQ96RG2 1323 aa13.82□□□□□ -0.2
SHCBP1-207ENST00000569702 SRGAP3O43295 1099 aa13.81□□□□□ -0.2
SHCBP1-207ENST00000569702 EGFRP00533 1210 aa13.81□□□□□ -0.2
SHCBP1-207ENST00000569702 FGFR2P21802 821 aa13.81□□□□□ -0.2
SHCBP1-207ENST00000569702 TTLL5Q6EMB2 1281 aa13.81□□□□□ -0.2
SHCBP1-207ENST00000569702 SAMD7Q7Z3H4 446 aa13.81□□□□□ -0.2
SHCBP1-207ENST00000569702 FAM84BQ96KN1 310 aaPredicted RBP13.81□□□□□ -0.2
SHCBP1-207ENST00000569702 USP17L8P0C7I0 530 aa13.8□□□□□ -0.2
SHCBP1-207ENST00000569702 MS4A1P11836 297 aa13.8□□□□□ -0.2
SHCBP1-207ENST00000569702 IL15P40933 162 aaPredicted RBP13.8□□□□□ -0.2
SHCBP1-207ENST00000569702 GTF2IP78347 998 aa13.8□□□□□ -0.2
SHCBP1-207ENST00000569702 FBXO33Q7Z6M2 555 aa13.8□□□□□ -0.2
SHCBP1-207ENST00000569702 ITPRIPQ8IWB1 547 aa13.8□□□□□ -0.2
SHCBP1-207ENST00000569702 PANK1Q8TE04 598 aa13.8□□□□□ -0.2
SHCBP1-207ENST00000569702 MXD3Q9BW11 206 aa13.8□□□□□ -0.2
SHCBP1-207ENST00000569702 SIL1Q9H173 461 aa13.8□□□□□ -0.2
SHCBP1-207ENST00000569702 PA2G4Q9UQ80 394 aaKnown RBP13.8□□□□□ -0.2
SHCBP1-207ENST00000569702 MYO3BQ8WXR4 1341 aa13.8□□□□□ -0.2
SHCBP1-207ENST00000569702 PNMA6EA0A0J9YXQ4 647 aa13.79□□□□□ -0.2
SHCBP1-207ENST00000569702 SASH1O94885 1247 aa13.79□□□□□ -0.2
SHCBP1-207ENST00000569702 HIBADHP31937 336 aaKnown RBP13.79□□□□□ -0.2
SHCBP1-207ENST00000569702 GYG1P46976 350 aa13.79□□□□□ -0.2
SHCBP1-207ENST00000569702 PUM3Q15397 648 aaKnown RBP13.79□□□□□ -0.2
SHCBP1-207ENST00000569702 TBC1D10BQ4KMP7 808 aaPredicted RBP13.79□□□□□ -0.2
SHCBP1-207ENST00000569702 DNAJC5GQ8N7S2 189 aa13.79□□□□□ -0.2
SHCBP1-207ENST00000569702 TDRD7Q8NHU6 1098 aaKnown RBP13.79□□□□□ -0.2
SHCBP1-207ENST00000569702 MMP14P50281 582 aa13.78□□□□□ -0.2
SHCBP1-207ENST00000569702 FKBP1AP62942 108 aaKnown RBP13.78□□□□□ -0.2
SHCBP1-207ENST00000569702 HTRA3P83110 453 aa13.78□□□□□ -0.2
SHCBP1-207ENST00000569702 CERS5Q8N5B7 392 aa13.78□□□□□ -0.2
SHCBP1-207ENST00000569702 FBXW7Q969H0 707 aa13.78□□□□□ -0.2
SHCBP1-207ENST00000569702 CEP126Q9P2H0 1117 aa13.78□□□□□ -0.2
SHCBP1-207ENST00000569702 FAM205AQ6ZU69 1335 aa13.78□□□□□ -0.2
SHCBP1-207ENST00000569702 IFIT1P09914 478 aaKnown RBP13.77□□□□□ -0.21
SHCBP1-207ENST00000569702 ATP8B2P98198 1209 aa13.77□□□□□ -0.21
SHCBP1-207ENST00000569702 POLA2Q14181 598 aa13.77□□□□□ -0.21
SHCBP1-207ENST00000569702 KIF4BQ2VIQ3 1234 aa13.77□□□□□ -0.21
SHCBP1-207ENST00000569702 RBM26Q5T8P6 1007 aaKnown RBP13.77□□□□□ -0.21
SHCBP1-207ENST00000569702 LPIN2Q92539 896 aa13.77□□□□□ -0.21
SHCBP1-207ENST00000569702 MYOZ2Q9NPC6 264 aa13.77□□□□□ -0.21
SHCBP1-207ENST00000569702 SLC5A1P13866 664 aa13.76□□□□□ -0.21
SHCBP1-207ENST00000569702 BCAMP50895 628 aa13.76□□□□□ -0.21
SHCBP1-207ENST00000569702 MVPQ14764 893 aaKnown RBP13.76□□□□□ -0.21
SHCBP1-207ENST00000569702 CAVIN4Q5BKX8 364 aa13.76□□□□□ -0.21
SHCBP1-207ENST00000569702 OGFOD1Q8N543 542 aa13.76□□□□□ -0.21
SHCBP1-207ENST00000569702 SSH3Q8TE77 659 aa13.76□□□□□ -0.21
SHCBP1-207ENST00000569702 C1orf115Q9H7X2 142 aa13.76□□□□□ -0.21
SHCBP1-207ENST00000569702 CREBZFQ9NS37 354 aa13.76□□□□□ -0.21
SHCBP1-207ENST00000569702 TMEM88BA6NKF7 163 aa13.75□□□□□ -0.21
SHCBP1-207ENST00000569702 TRAF5O00463 557 aa13.75□□□□□ -0.21
SHCBP1-207ENST00000569702 FMR1Q06787 632 aaKnown RBP eCLIP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms