RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 JAG2Q9Y219 1238 aa11.32□□□□□ -0.6
GTF3C1-210ENST00000569394 ZNF804BA4D1E1 1349 aa11.32□□□□□ -0.6
GTF3C1-210ENST00000569394 RTL9Q8NET4 1388 aa11.31□□□□□ -0.6
GTF3C1-210ENST00000569394 SCNN1DP51172 638 aa11.31□□□□□ -0.6
GTF3C1-210ENST00000569394 PANK1Q8TE04 598 aa11.31□□□□□ -0.6
GTF3C1-210ENST00000569394 ANKRD2Q9GZV1 360 aa11.31□□□□□ -0.6
GTF3C1-210ENST00000569394 C1orf115Q9H7X2 142 aa11.31□□□□□ -0.6
GTF3C1-210ENST00000569394 PODXL2Q9NZ53 605 aa11.31□□□□□ -0.6
GTF3C1-210ENST00000569394 UTYO14607 1347 aa11.31□□□□□ -0.6
GTF3C1-210ENST00000569394 LTBP1Q14766 1721 aa11.3□□□□□ -0.6
GTF3C1-210ENST00000569394 IQCA1LA6NCM1 817 aa11.3□□□□□ -0.6
GTF3C1-210ENST00000569394 APLP1P51693 650 aa11.3□□□□□ -0.6
GTF3C1-210ENST00000569394 BRPF1P55201 1214 aaPredicted RBP11.3□□□□□ -0.6
GTF3C1-210ENST00000569394 TNIP1Q15025 636 aa11.3□□□□□ -0.6
GTF3C1-210ENST00000569394 MAP1SQ66K74 1059 aaPredicted RBP11.3□□□□□ -0.6
GTF3C1-210ENST00000569394 ITPRIPQ8IWB1 547 aa11.3□□□□□ -0.6
GTF3C1-210ENST00000569394 SMC1BQ8NDV3 1235 aa11.3□□□□□ -0.6
GTF3C1-210ENST00000569394 RBM46Q8TBY0 533 aaKnown RBP11.3□□□□□ -0.6
GTF3C1-210ENST00000569394 PA2G4Q9UQ80 394 aaKnown RBP11.3□□□□□ -0.6
GTF3C1-210ENST00000569394 SSUH2Q9Y2M2 353 aa11.3□□□□□ -0.6
GTF3C1-210ENST00000569394 SCN9AQ15858 1988 aa11.29□□□□□ -0.6
GTF3C1-210ENST00000569394 RLBP1P12271 317 aa11.29□□□□□ -0.6
GTF3C1-210ENST00000569394 METTL24Q5JXM2 366 aa11.29□□□□□ -0.6
GTF3C1-210ENST00000569394 INTS3Q68E01 1043 aaKnown RBP11.29□□□□□ -0.6
GTF3C1-210ENST00000569394 SAMD7Q7Z3H4 446 aa11.29□□□□□ -0.6
GTF3C1-210ENST00000569394 ARHGAP45Q92619 1136 aa11.29□□□□□ -0.6
GTF3C1-210ENST00000569394 BCL11AQ9H165 835 aa11.29□□□□□ -0.6
GTF3C1-210ENST00000569394 VPS33BQ9H267 617 aa11.29□□□□□ -0.6
GTF3C1-210ENST00000569394 CNOT7Q9UIV1 285 aaKnown RBP11.29□□□□□ -0.6
GTF3C1-210ENST00000569394 GYG1P46976 350 aa11.28□□□□□ -0.6
GTF3C1-210ENST00000569394 FMR1Q06787 632 aaKnown RBP eCLIP11.28□□□□□ -0.6
GTF3C1-210ENST00000569394 RABL6Q3YEC7 729 aaPredicted RBP11.28□□□□□ -0.6
GTF3C1-210ENST00000569394 TBC1D10BQ4KMP7 808 aaPredicted RBP11.28□□□□□ -0.6
GTF3C1-210ENST00000569394 MICALL2Q8IY33 904 aa11.28□□□□□ -0.6
GTF3C1-210ENST00000569394 DZIP1LQ8IYY4 767 aaKnown RBP11.28□□□□□ -0.6
GTF3C1-210ENST00000569394 L3MBTL3Q96JM7 780 aaPredicted RBP11.28□□□□□ -0.6
GTF3C1-210ENST00000569394 GPRC5DQ9NZD1 345 aa11.28□□□□□ -0.6
GTF3C1-210ENST00000569394 IQSEC3Q9UPP2 1182 aaPredicted RBP11.28□□□□□ -0.6
GTF3C1-210ENST00000569394 LEMD3Q9Y2U8 911 aa11.28□□□□□ -0.6
GTF3C1-210ENST00000569394 A0A1B0GUL6 1792 aa11.28□□□□□ -0.6
GTF3C1-210ENST00000569394 SCN4AP35499 1836 aa11.28□□□□□ -0.6
GTF3C1-210ENST00000569394 F8W031 263 aaPredicted RBP11.27□□□□□ -0.61
GTF3C1-210ENST00000569394 GTF2IP78347 998 aa11.27□□□□□ -0.61
GTF3C1-210ENST00000569394 CHADLQ6NUI6 762 aa11.27□□□□□ -0.61
GTF3C1-210ENST00000569394 DLK2Q6UY11 383 aa11.27□□□□□ -0.61
GTF3C1-210ENST00000569394 TRPM4Q8TD43 1214 aa11.27□□□□□ -0.61
GTF3C1-210ENST00000569394 RCAN3Q9UKA8 241 aa11.27□□□□□ -0.61
GTF3C1-210ENST00000569394 SCAF8Q9UPN6 1271 aaKnown RBP11.27□□□□□ -0.61
GTF3C1-210ENST00000569394 MED23Q9ULK4 1368 aa11.27□□□□□ -0.61
GTF3C1-210ENST00000569394 H7C1D1 291 aa11.26□□□□□ -0.61
GTF3C1-210ENST00000569394 SRGAP3O43295 1099 aa11.26□□□□□ -0.61
GTF3C1-210ENST00000569394 EGFRP00533 1210 aa11.26□□□□□ -0.61
GTF3C1-210ENST00000569394 GNAI3P08754 354 aa11.26□□□□□ -0.61
GTF3C1-210ENST00000569394 RFX5P48382 616 aaPredicted RBP11.26□□□□□ -0.61
GTF3C1-210ENST00000569394 LDHDQ86WU2 507 aa11.26□□□□□ -0.61
GTF3C1-210ENST00000569394 DNAJC5GQ8N7S2 189 aa11.26□□□□□ -0.61
GTF3C1-210ENST00000569394 RIPOR2Q9Y4F9 1068 aa11.26□□□□□ -0.61
GTF3C1-210ENST00000569394 USP17L3A6NCW0 530 aa11.25□□□□□ -0.61
GTF3C1-210ENST00000569394 USP17L4A6NCW7 530 aa11.25□□□□□ -0.61
GTF3C1-210ENST00000569394 SPDYE2BA6NHP3 402 aa11.25□□□□□ -0.61
GTF3C1-210ENST00000569394 TRAF5O00463 557 aa11.25□□□□□ -0.61
GTF3C1-210ENST00000569394 GNAI2P04899 355 aa11.25□□□□□ -0.61
GTF3C1-210ENST00000569394 SPDYE6P0CI01 402 aa11.25□□□□□ -0.61
GTF3C1-210ENST00000569394 HIRAP54198 1017 aaPredicted RBP11.25□□□□□ -0.61
GTF3C1-210ENST00000569394 PTPN12Q05209 780 aaKnown RBP11.25□□□□□ -0.61
GTF3C1-210ENST00000569394 FSTL1Q12841 308 aa11.25□□□□□ -0.61
GTF3C1-210ENST00000569394 CHAF1AQ13111 956 aaPredicted RBP11.25□□□□□ -0.61
GTF3C1-210ENST00000569394 SPDYE2Q495Y8 402 aa11.25□□□□□ -0.61
GTF3C1-210ENST00000569394 TTLL5Q6EMB2 1281 aa11.25□□□□□ -0.61
GTF3C1-210ENST00000569394 RSBN1LQ6PCB5 846 aaPredicted RBP11.25□□□□□ -0.61
GTF3C1-210ENST00000569394 USP17L1Q7RTZ2 530 aa11.25□□□□□ -0.61
GTF3C1-210ENST00000569394 PNMA8AQ86V59 439 aaPredicted RBP11.25□□□□□ -0.61
GTF3C1-210ENST00000569394 VPS37DQ86XT2 251 aa11.25□□□□□ -0.61
GTF3C1-210ENST00000569394 CNTROBQ8N137 903 aa11.25□□□□□ -0.61
GTF3C1-210ENST00000569394 CD209Q9NNX6 404 aa11.25□□□□□ -0.61
GTF3C1-210ENST00000569394 ADARB2Q9NS39 739 aaKnown RBP11.25□□□□□ -0.61
GTF3C1-210ENST00000569394 COG6Q9Y2V7 657 aa11.25□□□□□ -0.61
GTF3C1-210ENST00000569394 PNMA6EA0A0J9YXQ4 647 aa11.24□□□□□ -0.61
GTF3C1-210ENST00000569394 EYA2O00167 538 aa11.24□□□□□ -0.61
GTF3C1-210ENST00000569394 FRAT2O75474 233 aaPredicted RBP11.24□□□□□ -0.61
GTF3C1-210ENST00000569394 VIL1P09327 827 aaKnown RBP11.24□□□□□ -0.61
GTF3C1-210ENST00000569394 C20orf194Q5TEA3 1177 aa11.24□□□□□ -0.61
GTF3C1-210ENST00000569394 ZNF804AQ7Z570 1209 aa11.24□□□□□ -0.61
GTF3C1-210ENST00000569394 PODNQ7Z5L7 613 aa11.24□□□□□ -0.61
GTF3C1-210ENST00000569394 KIAA0825Q8IV33 1275 aa11.24□□□□□ -0.61
GTF3C1-210ENST00000569394 COA1Q9GZY4 146 aa11.24□□□□□ -0.61
GTF3C1-210ENST00000569394 ZNF408Q9H9D4 720 aa11.24□□□□□ -0.61
GTF3C1-210ENST00000569394 ASTN2O75129 1339 aaPredicted RBP11.24□□□□□ -0.61
GTF3C1-210ENST00000569394 MROH5Q6ZUA9 1318 aa11.24□□□□□ -0.61
GTF3C1-210ENST00000569394 BCAMP50895 628 aa11.23□□□□□ -0.61
GTF3C1-210ENST00000569394 USP50Q70EL3 339 aaPredicted RBP11.23□□□□□ -0.61
GTF3C1-210ENST00000569394 ATG9AQ7Z3C6 839 aa11.23□□□□□ -0.61
GTF3C1-210ENST00000569394 SPOCK2Q92563 424 aa11.23□□□□□ -0.61
GTF3C1-210ENST00000569394 GLIS2Q9BZE0 524 aaPredicted RBP11.23□□□□□ -0.61
GTF3C1-210ENST00000569394 SASH1O94885 1247 aa11.22□□□□□ -0.61
GTF3C1-210ENST00000569394 PDE8BO95263 885 aa11.22□□□□□ -0.61
GTF3C1-210ENST00000569394 USP17L8P0C7I0 530 aa11.22□□□□□ -0.61
GTF3C1-210ENST00000569394 HIBADHP31937 336 aaKnown RBP11.22□□□□□ -0.61
GTF3C1-210ENST00000569394 GRM1Q13255 1194 aa11.22□□□□□ -0.61
GTF3C1-210ENST00000569394 OS9Q13438 667 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms