RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	SOX18	P35713	384 aa		7.64	□□□□□ -1.19
UBR1-209	ENST00000569243	SHISA5	Q8N114	240 aa		7.64	□□□□□ -1.19
UBR1-209	ENST00000569243	KLHL23	Q8NBE8	558 aa		7.64	□□□□□ -1.19
UBR1-209	ENST00000569243	GLMN	Q92990	594 aa		7.64	□□□□□ -1.19
UBR1-209	ENST00000569243	PAK6	Q9NQU5	681 aa	Predicted RBP	7.64	□□□□□ -1.19
UBR1-209	ENST00000569243	BSDC1	Q9NW68	430 aa	Predicted RBP	7.64	□□□□□ -1.19
UBR1-209	ENST00000569243	GAS2	O43903	313 aa	Known RBP	7.63	□□□□□ -1.19
UBR1-209	ENST00000569243	ATP11A	P98196	1134 aa		7.63	□□□□□ -1.19
UBR1-209	ENST00000569243	CEP135	Q66GS9	1140 aa		7.63	□□□□□ -1.19
UBR1-209	ENST00000569243	RGL4	Q8IZJ4	473 aa		7.63	□□□□□ -1.19
UBR1-209	ENST00000569243	TFIP11	Q9UBB9	837 aa	Known RBP	7.63	□□□□□ -1.19
UBR1-209	ENST00000569243	CARMIL2	Q6F5E8	1435 aa		7.62	□□□□□ -1.19
UBR1-209	ENST00000569243	RXRB	P28702	533 aa		7.62	□□□□□ -1.19
UBR1-209	ENST00000569243	SGO2	Q562F6	1265 aa		7.62	□□□□□ -1.19
UBR1-209	ENST00000569243	FAM117B	Q6P1L5	589 aa		7.62	□□□□□ -1.19
UBR1-209	ENST00000569243	FDX2	Q6P4F2	183 aa		7.62	□□□□□ -1.19
UBR1-209	ENST00000569243	CLUAP1	Q96AJ1	413 aa		7.62	□□□□□ -1.19
UBR1-209	ENST00000569243	KLHDC7B	Q96G42	594 aa		7.62	□□□□□ -1.19
UBR1-209	ENST00000569243	MAFB	Q9Y5Q3	323 aa	Predicted RBP	7.62	□□□□□ -1.19
UBR1-209	ENST00000569243	CYP26A1	O43174	497 aa		7.61	□□□□□ -1.19
UBR1-209	ENST00000569243	SEC13	P55735	322 aa		7.61	□□□□□ -1.19
UBR1-209	ENST00000569243	CPSF6	Q16630	551 aa	Known RBP eCLIP	7.61	□□□□□ -1.19
UBR1-209	ENST00000569243	ADAMTSL4	Q6UY14	1074 aa		7.61	□□□□□ -1.19
UBR1-209	ENST00000569243	KSR1	Q8IVT5	923 aa		7.61	□□□□□ -1.19
UBR1-209	ENST00000569243	HINFP	Q9BQA5	517 aa		7.6	□□□□□ -1.19
UBR1-209	ENST00000569243	PPP1R12C	Q9BZL4	782 aa		7.6	□□□□□ -1.19
UBR1-209	ENST00000569243	RNF208	Q9H0X6	261 aa		7.6	□□□□□ -1.19
UBR1-209	ENST00000569243	SEC31B	Q9NQW1	1179 aa		7.6	□□□□□ -1.19
UBR1-209	ENST00000569243	NCAN	O14594	1321 aa		7.59	□□□□□ -1.19
UBR1-209	ENST00000569243	PRRG2	O14669	202 aa		7.59	□□□□□ -1.19
UBR1-209	ENST00000569243	EPHA1	P21709	976 aa		7.59	□□□□□ -1.19
UBR1-209	ENST00000569243	LILRA6	Q6PI73	481 aa		7.59	□□□□□ -1.19
UBR1-209	ENST00000569243	LARP1	Q6PKG0	1096 aa	Known RBP	7.59	□□□□□ -1.19
UBR1-209	ENST00000569243	CALR3	Q96L12	384 aa	Known RBP	7.59	□□□□□ -1.19
UBR1-209	ENST00000569243	RUSC1	Q9BVN2	902 aa		7.59	□□□□□ -1.19
UBR1-209	ENST00000569243	QTRT2	Q9H974	415 aa	Known RBP	7.59	□□□□□ -1.19
UBR1-209	ENST00000569243	SH2B1	Q9NRF2	756 aa	Predicted RBP	7.59	□□□□□ -1.19
UBR1-209	ENST00000569243	FAM196B	A6NMK8	535 aa		7.58	□□□□□ -1.2
UBR1-209	ENST00000569243	BIN1	O00499	593 aa		7.58	□□□□□ -1.2
UBR1-209	ENST00000569243	SMNDC1	O75940	238 aa	Known RBP eCLIP	7.58	□□□□□ -1.2
UBR1-209	ENST00000569243	C11orf91	Q3C1V1	193 aa		7.58	□□□□□ -1.2
UBR1-209	ENST00000569243	COL13A1	Q5TAT6	717 aa	Predicted RBP	7.58	□□□□□ -1.2
UBR1-209	ENST00000569243	METTL22	Q9BUU2	404 aa	Predicted RBP	7.58	□□□□□ -1.2
UBR1-209	ENST00000569243	KCNMB2	Q9Y691	235 aa		7.58	□□□□□ -1.2
UBR1-209	ENST00000569243	NLRP12	P59046	1061 aa		7.57	□□□□□ -1.2
UBR1-209	ENST00000569243	PTK7	Q13308	1070 aa		7.57	□□□□□ -1.2
UBR1-209	ENST00000569243	NFKBIB	Q15653	356 aa		7.57	□□□□□ -1.2
UBR1-209	ENST00000569243	KRTAP19-4	Q3LI73	84 aa		7.57	□□□□□ -1.2
UBR1-209	ENST00000569243	KANK4	Q5T7N3	995 aa	Predicted RBP	7.57	□□□□□ -1.2
UBR1-209	ENST00000569243	SPACA7	Q96KW9	195 aa		7.57	□□□□□ -1.2
UBR1-209	ENST00000569243	IGFBP4	P22692	258 aa		7.56	□□□□□ -1.2
UBR1-209	ENST00000569243	RASSF4	Q9H2L5	321 aa		7.56	□□□□□ -1.2
UBR1-209	ENST00000569243	FAM95C	A0A1B0GW59	222 aa		7.55	□□□□□ -1.2
UBR1-209	ENST00000569243	PLCL1	Q15111	1095 aa		7.55	□□□□□ -1.2
UBR1-209	ENST00000569243	NLRP13	Q86W25	1043 aa		7.55	□□□□□ -1.2
UBR1-209	ENST00000569243	TREML1	Q86YW5	311 aa		7.55	□□□□□ -1.2
UBR1-209	ENST00000569243	SLC38A3	Q99624	504 aa		7.55	□□□□□ -1.2
UBR1-209	ENST00000569243	VRTN	Q9H8Y1	702 aa		7.55	□□□□□ -1.2
UBR1-209	ENST00000569243		B8ZZF3	427 aa		7.54	□□□□□ -1.2
UBR1-209	ENST00000569243	ADM	P35318	185 aa		7.54	□□□□□ -1.2
UBR1-209	ENST00000569243	ZNF792	Q3KQV3	632 aa		7.54	□□□□□ -1.2
UBR1-209	ENST00000569243	PAOX	Q6QHF9	649 aa		7.54	□□□□□ -1.2
UBR1-209	ENST00000569243	KRTAP9-3	Q9BYQ3	159 aa		7.54	□□□□□ -1.2
UBR1-209	ENST00000569243	BUD31	P41223	144 aa	Predicted RBP	7.53	□□□□□ -1.2
UBR1-209	ENST00000569243	DPYD	Q12882	1025 aa		7.53	□□□□□ -1.2
UBR1-209	ENST00000569243	HYAL2	Q12891	473 aa		7.53	□□□□□ -1.2
UBR1-209	ENST00000569243	CRTC2	Q53ET0	693 aa	Predicted RBP	7.53	□□□□□ -1.2
UBR1-209	ENST00000569243	ANKMY2	Q8IV38	441 aa		7.53	□□□□□ -1.2
UBR1-209	ENST00000569243	C12orf50	Q8NA57	414 aa	Predicted RBP	7.53	□□□□□ -1.2
UBR1-209	ENST00000569243	FAM168A	Q92567	244 aa		7.53	□□□□□ -1.2
UBR1-209	ENST00000569243	TBC1D32	Q96NH3	1257 aa		7.53	□□□□□ -1.2
UBR1-209	ENST00000569243	FAM170B	A6NMN3	283 aa		7.52	□□□□□ -1.21
UBR1-209	ENST00000569243	FAM177B	A6PVY3	158 aa		7.52	□□□□□ -1.21
UBR1-209	ENST00000569243	USP17L15	C9J2P7	530 aa		7.52	□□□□□ -1.21
UBR1-209	ENST00000569243	USP17L10	C9JJH3	530 aa		7.52	□□□□□ -1.21
UBR1-209	ENST00000569243	USP17L13	C9JLJ4	530 aa		7.52	□□□□□ -1.21
UBR1-209	ENST00000569243	USP17L12	C9JPN9	530 aa		7.52	□□□□□ -1.21
UBR1-209	ENST00000569243	USP17L11	C9JVI0	530 aa		7.52	□□□□□ -1.21
UBR1-209	ENST00000569243	USP17L21	D6R901	530 aa		7.52	□□□□□ -1.21
UBR1-209	ENST00000569243	USP17L18	D6R9N7	530 aa		7.52	□□□□□ -1.21
UBR1-209	ENST00000569243	USP17L22	D6RA61	530 aa		7.52	□□□□□ -1.21
UBR1-209	ENST00000569243	USP17L17	D6RBQ6	530 aa		7.52	□□□□□ -1.21
UBR1-209	ENST00000569243	USP17L19	D6RCP7	530 aa		7.52	□□□□□ -1.21
UBR1-209	ENST00000569243	USP17L20	D6RJB6	530 aa		7.52	□□□□□ -1.21
UBR1-209	ENST00000569243	USP17L24	Q0WX57	530 aa		7.52	□□□□□ -1.21
UBR1-209	ENST00000569243	OR13H1	Q8NG92	308 aa		7.52	□□□□□ -1.21
UBR1-209	ENST00000569243	ZMYND15	Q9H091	742 aa		7.52	□□□□□ -1.21
UBR1-209	ENST00000569243	ZC3H7B	Q9UGR2	993 aa	Known RBP	7.52	□□□□□ -1.21
UBR1-209	ENST00000569243	PTPRA	P18433	802 aa		7.51	□□□□□ -1.21
UBR1-209	ENST00000569243	LMOD1	P29536	600 aa	Predicted RBP	7.51	□□□□□ -1.21
UBR1-209	ENST00000569243	ZNF574	Q6ZN55	896 aa	Predicted RBP	7.51	□□□□□ -1.21
UBR1-209	ENST00000569243	MYO19	Q96H55	970 aa		7.51	□□□□□ -1.21
UBR1-209	ENST00000569243	LRRC4C	Q9HCJ2	640 aa		7.51	□□□□□ -1.21
UBR1-209	ENST00000569243	LRFN2	Q9ULH4	789 aa		7.51	□□□□□ -1.21
UBR1-209	ENST00000569243	MEGF11	A6BM72	1044 aa		7.5	□□□□□ -1.21
UBR1-209	ENST00000569243	FOXO3	O43524	673 aa		7.5	□□□□□ -1.21
UBR1-209	ENST00000569243	SCNN1A	P37088	669 aa		7.5	□□□□□ -1.21
UBR1-209	ENST00000569243	PIP4K2B	P78356	416 aa		7.5	□□□□□ -1.21
UBR1-209	ENST00000569243	TRIP4	Q15650	581 aa	Predicted RBP	7.5	□□□□□ -1.21
UBR1-209	ENST00000569243	ZAR1	Q86SH2	424 aa		7.5	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms