RNA–Protein interactions for RNA: ENST00000569035.5

NEIL1-221, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL1, Length 1,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-221ENST00000569035 DBNDD2Q9BQY9 259 aa21.13■□□□□ 0.97
NEIL1-221ENST00000569035 NYXQ9GZU5 481 aa21.13■□□□□ 0.97
NEIL1-221ENST00000569035 FSD2A1L4K1 749 aa21.12■□□□□ 0.97
NEIL1-221ENST00000569035 MRE11P49959 708 aa21.12■□□□□ 0.97
NEIL1-221ENST00000569035 PTH1RQ03431 593 aa21.12■□□□□ 0.97
NEIL1-221ENST00000569035 TAF7LQ5H9L4 462 aa21.12■□□□□ 0.97
NEIL1-221ENST00000569035 CCDC158Q5M9N0 1113 aa21.12■□□□□ 0.97
NEIL1-221ENST00000569035 JAKMIP1Q96N16 626 aaKnown RBP21.12■□□□□ 0.97
NEIL1-221ENST00000569035 ATP6V1DQ9Y5K8 247 aa21.12■□□□□ 0.97
NEIL1-221ENST00000569035 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.12■□□□□ 0.97
NEIL1-221ENST00000569035 RPAP1Q9BWH6 1393 aaPredicted RBP21.11■□□□□ 0.97
NEIL1-221ENST00000569035 RASEFQ8IZ41 740 aa21.11■□□□□ 0.97
NEIL1-221ENST00000569035 AK2P54819 239 aa21.1■□□□□ 0.97
NEIL1-221ENST00000569035 NLGN1Q8N2Q7 840 aa21.1■□□□□ 0.97
NEIL1-221ENST00000569035 CHMP4CQ96CF2 233 aa21.1■□□□□ 0.97
NEIL1-221ENST00000569035 FAM227BQ96M60 508 aa21.1■□□□□ 0.97
NEIL1-221ENST00000569035 NEUROD6Q96NK8 337 aa21.1■□□□□ 0.97
NEIL1-221ENST00000569035 CARMIL3Q8ND23 1372 aa21.1■□□□□ 0.97
NEIL1-221ENST00000569035 A0A0D9SFI3 127 aa21.1■□□□□ 0.97
NEIL1-221ENST00000569035 MBD3O95983 291 aa21.1■□□□□ 0.97
NEIL1-221ENST00000569035 ZFYP08048 801 aaPredicted RBP21.1■□□□□ 0.97
NEIL1-221ENST00000569035 HMGB1P09429 215 aaKnown RBP21.1■□□□□ 0.97
NEIL1-221ENST00000569035 BLOC1S2Q6QNY1 142 aa21.1■□□□□ 0.97
NEIL1-221ENST00000569035 GREM2Q9H772 168 aa21.1■□□□□ 0.97
NEIL1-221ENST00000569035 PAG1Q9NWQ8 432 aa21.1■□□□□ 0.97
NEIL1-221ENST00000569035 DDX49Q9Y6V7 483 aaKnown RBP21.1■□□□□ 0.97
NEIL1-221ENST00000569035 SLC27A2O14975 620 aa21.09■□□□□ 0.97
NEIL1-221ENST00000569035 NPHP1O15259 732 aa21.09■□□□□ 0.97
NEIL1-221ENST00000569035 TAF5LO75529 589 aa21.09■□□□□ 0.97
NEIL1-221ENST00000569035 DDR1Q08345 913 aa21.09■□□□□ 0.97
NEIL1-221ENST00000569035 MSL1Q68DK7 614 aa21.09■□□□□ 0.97
NEIL1-221ENST00000569035 KLHL34Q8N239 644 aa21.09■□□□□ 0.97
NEIL1-221ENST00000569035 ZNF594Q96JF6 807 aaPredicted RBP21.09■□□□□ 0.97
NEIL1-221ENST00000569035 PDGFDQ9GZP0 370 aaPredicted RBP21.09■□□□□ 0.97
NEIL1-221ENST00000569035 A0A1B0GUL7 405 aa21.08■□□□□ 0.97
NEIL1-221ENST00000569035 SERPINB2P05120 415 aa21.08■□□□□ 0.97
NEIL1-221ENST00000569035 SLC10A5Q5PT55 438 aa21.08■□□□□ 0.97
NEIL1-221ENST00000569035 MCTP1Q6DN14 999 aa21.08■□□□□ 0.97
NEIL1-221ENST00000569035 C3orf67Q6ZVT6 689 aa21.08■□□□□ 0.97
NEIL1-221ENST00000569035 ANKRD18BA2A2Z9 1011 aa21.08■□□□□ 0.96
NEIL1-221ENST00000569035 IFIT1P09914 478 aaKnown RBP21.08■□□□□ 0.96
NEIL1-221ENST00000569035 DNAJC2Q99543 621 aaKnown RBP21.08■□□□□ 0.96
NEIL1-221ENST00000569035 DSCC1Q9BVC3 393 aa21.08■□□□□ 0.96
NEIL1-221ENST00000569035 SMC3Q9UQE7 1217 aa21.08■□□□□ 0.96
NEIL1-221ENST00000569035 POLRMTO00411 1230 aaKnown RBP21.07■□□□□ 0.96
NEIL1-221ENST00000569035 ITGA6P23229 1130 aa21.07■□□□□ 0.96
NEIL1-221ENST00000569035 CNBD1Q8NA66 436 aa21.07■□□□□ 0.96
NEIL1-221ENST00000569035 ZNF512BQ96KM6 892 aaPredicted RBP21.07■□□□□ 0.96
NEIL1-221ENST00000569035 PSDA5PKW4 1024 aaPredicted RBP21.06■□□□□ 0.96
NEIL1-221ENST00000569035 CSPP1Q1MSJ5 1256 aa21.06■□□□□ 0.96
NEIL1-221ENST00000569035 GORABQ5T7V8 394 aa21.06■□□□□ 0.96
NEIL1-221ENST00000569035 PRR5LQ6MZQ0 368 aa21.06■□□□□ 0.96
NEIL1-221ENST00000569035 ZDHHC9Q9Y397 364 aa21.06■□□□□ 0.96
NEIL1-221ENST00000569035 LMBRD1Q9NUN5 540 aa21.05■□□□□ 0.96
NEIL1-221ENST00000569035 NCLP19338 710 aaKnown RBP21.05■□□□□ 0.96
NEIL1-221ENST00000569035 PDCP20941 246 aa21.05■□□□□ 0.96
NEIL1-221ENST00000569035 CCDC152Q4G0S7 254 aa21.05■□□□□ 0.96
NEIL1-221ENST00000569035 MMP10P09238 476 aa21.04■□□□□ 0.96
NEIL1-221ENST00000569035 RPS6KB1P23443 525 aa21.04■□□□□ 0.96
NEIL1-221ENST00000569035 LRRC24Q50LG9 513 aa21.04■□□□□ 0.96
NEIL1-221ENST00000569035 TTC39AQ5SRH9 613 aa21.04■□□□□ 0.96
NEIL1-221ENST00000569035 NLRP3Q96P20 1036 aa21.04■□□□□ 0.96
NEIL1-221ENST00000569035 PUS3Q9BZE2 481 aaKnown RBP21.04■□□□□ 0.96
NEIL1-221ENST00000569035 SEC31BQ9NQW1 1179 aa21.04■□□□□ 0.96
NEIL1-221ENST00000569035 ZMYM1Q5SVZ6 1142 aa21.03■□□□□ 0.96
NEIL1-221ENST00000569035 ZSCAN25Q6NSZ9 544 aa21.03■□□□□ 0.96
NEIL1-221ENST00000569035 SYAP1Q96A49 352 aaPredicted RBP21.03■□□□□ 0.96
NEIL1-221ENST00000569035 RNF113AO15541 343 aaKnown RBP21.02■□□□□ 0.96
NEIL1-221ENST00000569035 TIMM10P62072 90 aa21.02■□□□□ 0.96
NEIL1-221ENST00000569035 TTF1Q15361 905 aaPredicted RBP21.02■□□□□ 0.96
NEIL1-221ENST00000569035 SF3B3Q15393 1217 aaKnown RBP21.02■□□□□ 0.96
NEIL1-221ENST00000569035 GZF1Q9H116 711 aaPredicted RBP21.02■□□□□ 0.96
NEIL1-221ENST00000569035 ADCK5Q3MIX3 580 aa21.02■□□□□ 0.96
NEIL1-221ENST00000569035 LDHAL6AQ6ZMR3 332 aa21.02■□□□□ 0.96
NEIL1-221ENST00000569035 NOL8Q76FK4 1167 aaKnown RBP21.02■□□□□ 0.96
NEIL1-221ENST00000569035 CTNNA3Q9UI47 895 aa21.02■□□□□ 0.96
NEIL1-221ENST00000569035 MROH5Q6ZUA9 1318 aa21.01■□□□□ 0.95
NEIL1-221ENST00000569035 GOLIM4O00461 696 aa21.01■□□□□ 0.95
NEIL1-221ENST00000569035 PKP1Q13835 747 aa21.01■□□□□ 0.95
NEIL1-221ENST00000569035 NEK1Q96PY6 1258 aa21.01■□□□□ 0.95
NEIL1-221ENST00000569035 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.01■□□□□ 0.954e-6■■■□□ 18.8
NEIL1-221ENST00000569035 PARP3Q9Y6F1 533 aa21.01■□□□□ 0.95
NEIL1-221ENST00000569035 ZNF445P59923 1031 aa21■□□□□ 0.95
NEIL1-221ENST00000569035 ST5P78524 1137 aa21■□□□□ 0.95
NEIL1-221ENST00000569035 DDX46Q7L014 1031 aaKnown RBP21■□□□□ 0.95
NEIL1-221ENST00000569035 ZNF589Q86UQ0 364 aaPredicted RBP21■□□□□ 0.95
NEIL1-221ENST00000569035 RIPOR2Q9Y4F9 1068 aa21■□□□□ 0.95
NEIL1-221ENST00000569035 LAMB2P55268 1798 aa21■□□□□ 0.95
NEIL1-221ENST00000569035 COL24A1Q17RW2 1714 aa21■□□□□ 0.95
NEIL1-221ENST00000569035 STX6O43752 255 aa21■□□□□ 0.95
NEIL1-221ENST00000569035 ZSCAN22P10073 491 aaPredicted RBP21■□□□□ 0.95
NEIL1-221ENST00000569035 R3HDM1Q15032 1099 aaKnown RBP21■□□□□ 0.95
NEIL1-221ENST00000569035 ATP2B3Q16720 1220 aa21■□□□□ 0.95
NEIL1-221ENST00000569035 METTL24Q5JXM2 366 aa21■□□□□ 0.95
NEIL1-221ENST00000569035 XAGE2Q96GT9 111 aa21■□□□□ 0.95
NEIL1-221ENST00000569035 RTL9Q8NET4 1388 aa20.99■□□□□ 0.95
NEIL1-221ENST00000569035 MYH7P12883 1935 aa20.99■□□□□ 0.95
NEIL1-221ENST00000569035 UQCRFS1P1P0C7P4 283 aa20.99■□□□□ 0.95
NEIL1-221ENST00000569035 TMEM87AQ8NBN3 555 aa20.99■□□□□ 0.95
NEIL1-221ENST00000569035 GRPEL1Q9HAV7 217 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms