RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 CCDC85AQ96PX6 553 aaPredicted RBP16.15■□□□□ 0.18
SNX29-207ENST00000568949 CDC5LQ99459 802 aaKnown RBP16.15■□□□□ 0.18
SNX29-207ENST00000568949 CWC25Q9NXE8 425 aaPredicted RBP16.15■□□□□ 0.18
SNX29-207ENST00000568949 PTPN12Q05209 780 aaKnown RBP16.14■□□□□ 0.17
SNX29-207ENST00000568949 PHAXQ9H814 394 aaKnown RBP16.14■□□□□ 0.17
SNX29-207ENST00000568949 BSDC1Q9NW68 430 aaPredicted RBP16.14■□□□□ 0.17
SNX29-207ENST00000568949 ZNF646O15015 1829 aaPredicted RBP16.13■□□□□ 0.17
SNX29-207ENST00000568949 MKRN3Q13064 507 aaKnown RBP16.13■□□□□ 0.17
SNX29-207ENST00000568949 LDLRAD1Q5T700 205 aa16.13■□□□□ 0.17
SNX29-207ENST00000568949 SPRYD7Q5W111 196 aa16.13■□□□□ 0.17
SNX29-207ENST00000568949 APOBEC3FQ8IUX4 373 aaKnown RBP16.13■□□□□ 0.17
SNX29-207ENST00000568949 METTL22Q9BUU2 404 aaPredicted RBP16.13■□□□□ 0.17
SNX29-207ENST00000568949 COA1Q9GZY4 146 aa16.13■□□□□ 0.17
SNX29-207ENST00000568949 R3HDMLQ9H3Y0 253 aa16.13■□□□□ 0.17
SNX29-207ENST00000568949 MBIPQ9NS73 344 aa16.13■□□□□ 0.17
SNX29-207ENST00000568949 ZNF853P0CG23 659 aa16.12■□□□□ 0.17
SNX29-207ENST00000568949 CTSWP56202 376 aa16.12■□□□□ 0.17
SNX29-207ENST00000568949 INHBEP58166 350 aa16.12■□□□□ 0.17
SNX29-207ENST00000568949 INTS3Q68E01 1043 aaKnown RBP16.12■□□□□ 0.17
SNX29-207ENST00000568949 JARID2Q92833 1246 aaPredicted RBP16.12■□□□□ 0.17
SNX29-207ENST00000568949 MXD3Q9BW11 206 aa16.12■□□□□ 0.17
SNX29-207ENST00000568949 MINPP1Q9UNW1 487 aa16.12■□□□□ 0.17
SNX29-207ENST00000568949 WTIPA6NIX2 430 aaPredicted RBP16.11■□□□□ 0.17
SNX29-207ENST00000568949 CCT4P50991 539 aaKnown RBP16.11■□□□□ 0.17
SNX29-207ENST00000568949 KIAA0100Q14667 2235 aaKnown RBP16.11■□□□□ 0.17
SNX29-207ENST00000568949 MYH3P11055 1940 aa16.1■□□□□ 0.17
SNX29-207ENST00000568949 MANSC4A6NHS7 340 aaPredicted RBP16.1■□□□□ 0.17
SNX29-207ENST00000568949 SASH1O94885 1247 aa16.1■□□□□ 0.17
SNX29-207ENST00000568949 DDX58O95786 925 aaKnown RBP16.1■□□□□ 0.17
SNX29-207ENST00000568949 TTLL11Q8NHH1 800 aa16.1■□□□□ 0.17
SNX29-207ENST00000568949 FBXW7Q969H0 707 aa16.1■□□□□ 0.17
SNX29-207ENST00000568949 ZBED3Q96IU2 234 aaPredicted RBP16.1■□□□□ 0.17
SNX29-207ENST00000568949 CHMP4AQ9BY43 222 aa16.1■□□□□ 0.17
SNX29-207ENST00000568949 ANGEL1Q9UNK9 670 aaKnown RBP16.1■□□□□ 0.17
SNX29-207ENST00000568949 LEMD3Q9Y2U8 911 aa16.1■□□□□ 0.17
SNX29-207ENST00000568949 COL1A1P02452 1464 aaPredicted RBP16.1■□□□□ 0.17
SNX29-207ENST00000568949 PRKG1Q13976 671 aa16.09■□□□□ 0.17
SNX29-207ENST00000568949 WDR43Q15061 677 aaKnown RBP eCLIP16.09■□□□□ 0.17
SNX29-207ENST00000568949 MAP3K11Q16584 847 aa16.09■□□□□ 0.17
SNX29-207ENST00000568949 HABP4Q5JVS0 413 aaKnown RBP16.09■□□□□ 0.17
SNX29-207ENST00000568949 TTLL5Q6EMB2 1281 aa16.09■□□□□ 0.17
SNX29-207ENST00000568949 IFT57Q9NWB7 429 aa16.09■□□□□ 0.17
SNX29-207ENST00000568949 TRIM17Q9Y577 477 aa16.09■□□□□ 0.17
SNX29-207ENST00000568949 MYBBP1AQ9BQG0 1328 aaKnown RBP16.09■□□□□ 0.17
SNX29-207ENST00000568949 ZBTB48P10074 688 aaPredicted RBP16.08■□□□□ 0.16
SNX29-207ENST00000568949 OTOP1Q7RTM1 612 aa16.08■□□□□ 0.16
SNX29-207ENST00000568949 IFNL1Q8IU54 200 aa16.08■□□□□ 0.16
SNX29-207ENST00000568949 GREM2Q9H772 168 aa16.08■□□□□ 0.16
SNX29-207ENST00000568949 LAMB1P07942 1786 aa16.08■□□□□ 0.16
SNX29-207ENST00000568949 SPEF2Q9C093 1822 aa16.08■□□□□ 0.16
SNX29-207ENST00000568949 UNCXA6NJT0 531 aa16.07■□□□□ 0.16
SNX29-207ENST00000568949 GNAI1P63096 354 aa16.07■□□□□ 0.16
SNX29-207ENST00000568949 CALD1Q05682 793 aaKnown RBP16.07■□□□□ 0.16
SNX29-207ENST00000568949 TXNRD3Q86VQ6 643 aa16.07■□□□□ 0.16
SNX29-207ENST00000568949 KIAA0825Q8IV33 1275 aa16.07■□□□□ 0.16
SNX29-207ENST00000568949 SLC10A4Q96EP9 437 aa16.07■□□□□ 0.16
SNX29-207ENST00000568949 ADAMTS8Q9UP79 889 aa16.07■□□□□ 0.16
SNX29-207ENST00000568949 RBBP6Q7Z6E9 1792 aaKnown RBP16.07■□□□□ 0.16
SNX29-207ENST00000568949 ZNF804BA4D1E1 1349 aa16.06■□□□□ 0.16
SNX29-207ENST00000568949 POTEFA5A3E0 1075 aa16.06■□□□□ 0.16
SNX29-207ENST00000568949 ELL2O00472 640 aaPredicted RBP16.06■□□□□ 0.16
SNX29-207ENST00000568949 PPP1R12BO60237 982 aaPredicted RBP16.06■□□□□ 0.16
SNX29-207ENST00000568949 IGKV5-2P06315 115 aa16.06■□□□□ 0.16
SNX29-207ENST00000568949 IGHMBP2P38935 993 aaKnown RBP16.06■□□□□ 0.16
SNX29-207ENST00000568949 CCDC30Q5VVM6 783 aa16.06■□□□□ 0.16
SNX29-207ENST00000568949 KSR2Q6VAB6 950 aa16.06■□□□□ 0.16
SNX29-207ENST00000568949 ERO1AQ96HE7 468 aa16.06■□□□□ 0.16
SNX29-207ENST00000568949 ANKRD2Q9GZV1 360 aa16.06■□□□□ 0.16
SNX29-207ENST00000568949 DEFB129Q9H1M3 183 aa16.06■□□□□ 0.16
SNX29-207ENST00000568949 MAP3K2Q9Y2U5 619 aa16.06■□□□□ 0.16
SNX29-207ENST00000568949 PPP2R3BQ9Y5P8 575 aa16.06■□□□□ 0.16
SNX29-207ENST00000568949 MTMR14Q8NCE2 650 aa16.05■□□□□ 0.16
SNX29-207ENST00000568949 WNK4Q96J92 1243 aa16.05■□□□□ 0.16
SNX29-207ENST00000568949 PTPN22Q9Y2R2 807 aa16.05■□□□□ 0.16
SNX29-207ENST00000568949 IGF2BP3O00425 579 aaKnown RBP eCLIP16.04■□□□□ 0.16
SNX29-207ENST00000568949 GTF2IP78347 998 aa16.04■□□□□ 0.16
SNX29-207ENST00000568949 NEXNQ0ZGT2 675 aa16.04■□□□□ 0.16
SNX29-207ENST00000568949 DLGAP5Q15398 846 aa16.04■□□□□ 0.16
SNX29-207ENST00000568949 OTUD7BQ6GQQ9 843 aa16.04■□□□□ 0.16
SNX29-207ENST00000568949 C8orf58Q8NAV2 365 aa16.04■□□□□ 0.16
SNX29-207ENST00000568949 ARMC5Q96C12 935 aa16.04■□□□□ 0.16
SNX29-207ENST00000568949 PI4KAP2A4QPH2 592 aa16.03■□□□□ 0.16
SNX29-207ENST00000568949 PI4KAP1Q8N8J0 262 aa16.03■□□□□ 0.16
SNX29-207ENST00000568949 CD209Q9NNX6 404 aa16.03■□□□□ 0.16
SNX29-207ENST00000568949 FZD1Q9UP38 647 aa16.03■□□□□ 0.16
SNX29-207ENST00000568949 ECM29Q5VYK3 1845 aa16.03■□□□□ 0.16
SNX29-207ENST00000568949 SSC5DA1L4H1 1573 aa16.02■□□□□ 0.16
SNX29-207ENST00000568949 NEURL1BA8MQ27 555 aa16.02■□□□□ 0.16
SNX29-207ENST00000568949 H7C1W4 665 aa16.02■□□□□ 0.16
SNX29-207ENST00000568949 KLRK1P26718 216 aa16.02■□□□□ 0.16
SNX29-207ENST00000568949 SUPT20HL1Q3ZLR7 823 aa16.02■□□□□ 0.16
SNX29-207ENST00000568949 CLMNQ96JQ2 1002 aa16.02■□□□□ 0.16
SNX29-207ENST00000568949 MPHOSPH8Q99549 860 aa16.02■□□□□ 0.16
SNX29-207ENST00000568949 PLA2G12BQ9BX93 195 aa16.02■□□□□ 0.16
SNX29-207ENST00000568949 CRHR2Q13324 411 aa16.01■□□□□ 0.15
SNX29-207ENST00000568949 CD99L2Q8TCZ2 262 aa16.01■□□□□ 0.15
SNX29-207ENST00000568949 EFCC1Q9HA90 598 aa16.01■□□□□ 0.15
SNX29-207ENST00000568949 TESPA1A2RU30 521 aaPredicted RBP16■□□□□ 0.15
SNX29-207ENST00000568949 MYO1BO43795 1136 aa16■□□□□ 0.15
SNX29-207ENST00000568949 EN2P19622 333 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms