RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 PKDCCQ504Y2 493 aa8.06□□□□□ -1.12
CDH13-211ENST00000568770 SLC27A3Q5K4L6 730 aa8.06□□□□□ -1.12
CDH13-211ENST00000568770 TFCP2L1Q9NZI6 479 aa8.06□□□□□ -1.12
CDH13-211ENST00000568770 ATP5J2-PTCD1G3V325 749 aa8.05□□□□□ -1.12
CDH13-211ENST00000568770 ZNF594Q96JF6 807 aaPredicted RBP8.05□□□□□ -1.12
CDH13-211ENST00000568770 IRX2Q9BZI1 471 aaPredicted RBP8.05□□□□□ -1.12
CDH13-211ENST00000568770 DACH1Q9UI36 760 aa8.05□□□□□ -1.12
CDH13-211ENST00000568770 KTN1Q86UP2 1357 aaKnown RBP8.05□□□□□ -1.12
CDH13-211ENST00000568770 CARNS1A5YM72 827 aa8.04□□□□□ -1.12
CDH13-211ENST00000568770 ST8SIA5O15466 376 aa8.04□□□□□ -1.12
CDH13-211ENST00000568770 ATG7O95352 703 aa8.04□□□□□ -1.12
CDH13-211ENST00000568770 ADH1AP07327 375 aa8.04□□□□□ -1.12
CDH13-211ENST00000568770 SCNN1DP51172 638 aa8.04□□□□□ -1.12
CDH13-211ENST00000568770 DDX54Q8TDD1 881 aaKnown RBP8.04□□□□□ -1.12
CDH13-211ENST00000568770 ANKRD24Q8TF21 1146 aa8.04□□□□□ -1.12
CDH13-211ENST00000568770 RAB6BQ9NRW1 208 aa8.04□□□□□ -1.12
CDH13-211ENST00000568770 DNAAF2Q9NVR5 837 aaKnown RBP8.04□□□□□ -1.12
CDH13-211ENST00000568770 ZMIZ1Q9ULJ6 1067 aa8.04□□□□□ -1.12
CDH13-211ENST00000568770 FAM196BA6NMK8 535 aa8.03□□□□□ -1.12
CDH13-211ENST00000568770 TMEM229AB2RXF0 380 aa8.03□□□□□ -1.12
CDH13-211ENST00000568770 USP17L15C9J2P7 530 aa8.03□□□□□ -1.12
CDH13-211ENST00000568770 USP17L10C9JJH3 530 aa8.03□□□□□ -1.12
CDH13-211ENST00000568770 USP17L13C9JLJ4 530 aa8.03□□□□□ -1.12
CDH13-211ENST00000568770 USP17L12C9JPN9 530 aa8.03□□□□□ -1.12
CDH13-211ENST00000568770 USP17L11C9JVI0 530 aa8.03□□□□□ -1.12
CDH13-211ENST00000568770 USP17L21D6R901 530 aa8.03□□□□□ -1.12
CDH13-211ENST00000568770 USP17L18D6R9N7 530 aa8.03□□□□□ -1.12
CDH13-211ENST00000568770 USP17L22D6RA61 530 aa8.03□□□□□ -1.12
CDH13-211ENST00000568770 USP17L17D6RBQ6 530 aa8.03□□□□□ -1.12
CDH13-211ENST00000568770 USP17L19D6RCP7 530 aa8.03□□□□□ -1.12
CDH13-211ENST00000568770 USP17L20D6RJB6 530 aa8.03□□□□□ -1.12
CDH13-211ENST00000568770 LCE2BO14633 110 aa8.03□□□□□ -1.12
CDH13-211ENST00000568770 HSPA6P17066 643 aa8.03□□□□□ -1.12
CDH13-211ENST00000568770 RELBQ01201 579 aa8.03□□□□□ -1.12
CDH13-211ENST00000568770 USP17L24Q0WX57 530 aa8.03□□□□□ -1.12
CDH13-211ENST00000568770 CCDC102BQ68D86 513 aa8.03□□□□□ -1.12
CDH13-211ENST00000568770 TRIM50Q86XT4 487 aa8.03□□□□□ -1.12
CDH13-211ENST00000568770 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.03□□□□□ -1.12
CDH13-211ENST00000568770 MEIOBQ8N635 442 aa8.03□□□□□ -1.12
CDH13-211ENST00000568770 ZNF526Q8TF50 670 aaPredicted RBP8.03□□□□□ -1.12
CDH13-211ENST00000568770 SYTL4Q96C24 671 aaPredicted RBP8.03□□□□□ -1.12
CDH13-211ENST00000568770 ZNF395Q9H8N7 513 aaPredicted RBP8.03□□□□□ -1.12
CDH13-211ENST00000568770 ITGB4P16144 1822 aa8.03□□□□□ -1.12
CDH13-211ENST00000568770 ADCY9O60503 1353 aa8.02□□□□□ -1.13
CDH13-211ENST00000568770 NSD2O96028 1365 aa8.02□□□□□ -1.13
CDH13-211ENST00000568770 USP31Q70CQ4 1352 aa8.02□□□□□ -1.13
CDH13-211ENST00000568770 ANKRD36BQ8N2N9 1353 aa8.02□□□□□ -1.13
CDH13-211ENST00000568770 SFI1A8K8P3 1242 aa8.02□□□□□ -1.13
CDH13-211ENST00000568770 BMP1P13497 986 aa8.02□□□□□ -1.13
CDH13-211ENST00000568770 PTGIRP43119 386 aa8.02□□□□□ -1.13
CDH13-211ENST00000568770 SMCPP49901 116 aaPredicted RBP8.02□□□□□ -1.13
CDH13-211ENST00000568770 DPYDQ12882 1025 aa8.02□□□□□ -1.13
CDH13-211ENST00000568770 TRIM46Q7Z4K8 759 aa8.02□□□□□ -1.13
CDH13-211ENST00000568770 NME9Q86XW9 330 aa8.02□□□□□ -1.13
CDH13-211ENST00000568770 LARGE2Q8N3Y3 721 aa8.02□□□□□ -1.13
CDH13-211ENST00000568770 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.02□□□□□ -1.13
CDH13-211ENST00000568770 TPCN2Q8NHX9 752 aa8.02□□□□□ -1.13
CDH13-211ENST00000568770 STK32AQ8WU08 396 aa8.02□□□□□ -1.13
CDH13-211ENST00000568770 ETNK1Q9HBU6 452 aa8.02□□□□□ -1.13
CDH13-211ENST00000568770 ARHGEF10LQ9HCE6 1279 aa8.02□□□□□ -1.13
CDH13-211ENST00000568770 AAASQ9NRG9 546 aa8.02□□□□□ -1.13
CDH13-211ENST00000568770 UBR3Q6ZT12 1888 aa8.02□□□□□ -1.13
CDH13-211ENST00000568770 CD163L1Q9NR16 1453 aa8.01□□□□□ -1.13
CDH13-211ENST00000568770 A0A1W2PRU2 124 aa8.01□□□□□ -1.13
CDH13-211ENST00000568770 IL2RAP01589 272 aa8.01□□□□□ -1.13
CDH13-211ENST00000568770 ATP1A2P50993 1020 aa8.01□□□□□ -1.13
CDH13-211ENST00000568770 LAPTM4AQ15012 233 aa8.01□□□□□ -1.13
CDH13-211ENST00000568770 MSL1Q68DK7 614 aa8.01□□□□□ -1.13
CDH13-211ENST00000568770 COL23A1Q86Y22 540 aaPredicted RBP8.01□□□□□ -1.13
CDH13-211ENST00000568770 ANKMY2Q8IV38 441 aa8.01□□□□□ -1.13
CDH13-211ENST00000568770 CCNL1Q9UK58 526 aaPredicted RBP8.01□□□□□ -1.13
CDH13-211ENST00000568770 NOVA2Q9UNW9 492 aaKnown RBP8.01□□□□□ -1.13
CDH13-211ENST00000568770 TOGARAM1Q9Y4F4 1720 aa8□□□□□ -1.13
CDH13-211ENST00000568770 SBNO2Q9Y2G9 1366 aa8□□□□□ -1.13
CDH13-211ENST00000568770 AXIN1O15169 862 aa8□□□□□ -1.13
CDH13-211ENST00000568770 LGR5O75473 907 aa8□□□□□ -1.13
CDH13-211ENST00000568770 GNRH1P01148 92 aa8□□□□□ -1.13
CDH13-211ENST00000568770 GDF10P55107 478 aa8□□□□□ -1.13
CDH13-211ENST00000568770 CYP2U1Q7Z449 544 aa8□□□□□ -1.13
CDH13-211ENST00000568770 SIX5Q8N196 739 aa8□□□□□ -1.13
CDH13-211ENST00000568770 LTV1Q96GA3 475 aaPredicted RBP8□□□□□ -1.13
CDH13-211ENST00000568770 ZNF358Q9NW07 568 aa8□□□□□ -1.13
CDH13-211ENST00000568770 CD2APQ9Y5K6 639 aa8□□□□□ -1.13
CDH13-211ENST00000568770 N4BP2Q86UW6 1770 aaPredicted RBP7.99□□□□□ -1.13
CDH13-211ENST00000568770 C4BP0C0L5 1744 aa7.99□□□□□ -1.13
CDH13-211ENST00000568770 ELOAQ14241 798 aaKnown RBP7.99□□□□□ -1.13
CDH13-211ENST00000568770 CTC1Q2NKJ3 1217 aa7.99□□□□□ -1.13
CDH13-211ENST00000568770 C6orf118Q5T5N4 469 aa7.99□□□□□ -1.13
CDH13-211ENST00000568770 TMEM164Q5U3C3 297 aa7.99□□□□□ -1.13
CDH13-211ENST00000568770 MRPL14Q6P1L8 145 aaKnown RBP7.99□□□□□ -1.13
CDH13-211ENST00000568770 LINC00528Q8N1L1 170 aa7.99□□□□□ -1.13
CDH13-211ENST00000568770 CRIPAKQ8N1N5 446 aa7.99□□□□□ -1.13
CDH13-211ENST00000568770 RETREG2Q8NC44 543 aa7.99□□□□□ -1.13
CDH13-211ENST00000568770 WDR90Q96KV7 1748 aa7.99□□□□□ -1.13
CDH13-211ENST00000568770 SERTAD1Q9UHV2 236 aa7.99□□□□□ -1.13
CDH13-211ENST00000568770 HRH3Q9Y5N1 445 aa7.99□□□□□ -1.13
CDH13-211ENST00000568770 USP47Q96K76 1375 aa7.98□□□□□ -1.13
CDH13-211ENST00000568770 INHAP05111 366 aa7.98□□□□□ -1.13
CDH13-211ENST00000568770 IP6K1Q92551 441 aa7.98□□□□□ -1.13
CDH13-211ENST00000568770 L3MBTL2Q969R5 705 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms