RNA–Protein interactions for RNA: ENST00000568743.1

PKM-221, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-221ENST00000568743 NEFLP07196 543 aa12.5□□□□□ -0.41
PKM-221ENST00000568743 SLC5A1P13866 664 aa12.5□□□□□ -0.41
PKM-221ENST00000568743 ADORA1P30542 326 aa12.5□□□□□ -0.41
PKM-221ENST00000568743 TIMM10P62072 90 aa12.5□□□□□ -0.41
PKM-221ENST00000568743 AAMPQ13685 434 aa12.5□□□□□ -0.41
PKM-221ENST00000568743 LPIN2Q92539 896 aa12.5□□□□□ -0.41
PKM-221ENST00000568743 IL1RAPL2Q9NP60 686 aa12.5□□□□□ -0.41
PKM-221ENST00000568743 KCNQ5Q9NR82 932 aa12.5□□□□□ -0.41
PKM-221ENST00000568743 ZNF541Q9H0D2 1346 aa12.5□□□□□ -0.41
PKM-221ENST00000568743 SBF1O95248 1867 aa12.5□□□□□ -0.41
PKM-221ENST00000568743 ZNF609O15014 1411 aa12.49□□□□□ -0.41
PKM-221ENST00000568743 A0A1B0GUL7 405 aa12.49□□□□□ -0.41
PKM-221ENST00000568743 FZD9O00144 591 aa12.49□□□□□ -0.41
PKM-221ENST00000568743 SMARCA5O60264 1052 aaPredicted RBP12.49□□□□□ -0.41
PKM-221ENST00000568743 RAD17O75943 681 aa12.49□□□□□ -0.41
PKM-221ENST00000568743 IFIT1P09914 478 aaKnown RBP12.49□□□□□ -0.41
PKM-221ENST00000568743 BCAMP50895 628 aa12.49□□□□□ -0.41
PKM-221ENST00000568743 HSP90AB4PQ58FF6 505 aa12.49□□□□□ -0.41
PKM-221ENST00000568743 C15orf52Q6ZUT6 534 aaKnown RBP12.49□□□□□ -0.41
PKM-221ENST00000568743 RHPN1Q8TCX5 695 aa12.49□□□□□ -0.41
PKM-221ENST00000568743 NEUROD6Q96NK8 337 aa12.49□□□□□ -0.41
PKM-221ENST00000568743 ZNRF3Q9ULT6 936 aa12.49□□□□□ -0.41
PKM-221ENST00000568743 TIAM2Q8IVF5 1701 aa12.48□□□□□ -0.41
PKM-221ENST00000568743 IGHDP01880 384 aa12.48□□□□□ -0.41
PKM-221ENST00000568743 HDAC1Q13547 482 aaPredicted RBP12.48□□□□□ -0.41
PKM-221ENST00000568743 TNNI3KQ59H18 835 aa12.48□□□□□ -0.41
PKM-221ENST00000568743 ZNF804AQ7Z570 1209 aa12.48□□□□□ -0.41
PKM-221ENST00000568743 ERC1Q8IUD2 1116 aa12.48□□□□□ -0.41
PKM-221ENST00000568743 ZNF526Q8TF50 670 aaPredicted RBP12.48□□□□□ -0.41
PKM-221ENST00000568743 KIF1BPQ96EK5 621 aa12.48□□□□□ -0.41
PKM-221ENST00000568743 FAM84BQ96KN1 310 aaPredicted RBP12.48□□□□□ -0.41
PKM-221ENST00000568743 COA1Q9GZY4 146 aa12.48□□□□□ -0.41
PKM-221ENST00000568743 DCTPP1Q9H773 170 aa12.48□□□□□ -0.41
PKM-221ENST00000568743 CD209Q9NNX6 404 aa12.48□□□□□ -0.41
PKM-221ENST00000568743 IQSEC3Q9UPP2 1182 aaPredicted RBP12.48□□□□□ -0.41
PKM-221ENST00000568743 AKAP2Q9Y2D5 859 aa12.48□□□□□ -0.41
PKM-221ENST00000568743 FPGT-TNNI3KV9GXZ4 949 aa12.48□□□□□ -0.41
PKM-221ENST00000568743 CCDC88AQ3V6T2 1871 aa12.48□□□□□ -0.41
PKM-221ENST00000568743 RAB11FIP3O75154 756 aa12.47□□□□□ -0.41
PKM-221ENST00000568743 YY1P25490 414 aa12.47□□□□□ -0.41
PKM-221ENST00000568743 HIBADHP31937 336 aaKnown RBP12.47□□□□□ -0.41
PKM-221ENST00000568743 EIF6P56537 245 aaKnown RBP12.47□□□□□ -0.41
PKM-221ENST00000568743 CXCL9Q07325 125 aa12.47□□□□□ -0.41
PKM-221ENST00000568743 CAVIN4Q5BKX8 364 aa12.47□□□□□ -0.41
PKM-221ENST00000568743 FBXO33Q7Z6M2 555 aa12.47□□□□□ -0.41
PKM-221ENST00000568743 VPS37DQ86XT2 251 aa12.47□□□□□ -0.41
PKM-221ENST00000568743 FBXW7Q969H0 707 aa12.47□□□□□ -0.41
PKM-221ENST00000568743 EAF2Q96CJ1 260 aaPredicted RBP12.47□□□□□ -0.41
PKM-221ENST00000568743 CCDC8Q9H0W5 538 aaPredicted RBP12.47□□□□□ -0.41
PKM-221ENST00000568743 RWDD1Q9H446 243 aaPredicted RBP12.47□□□□□ -0.41
PKM-221ENST00000568743 TLR7Q9NYK1 1049 aaKnown RBP12.47□□□□□ -0.41
PKM-221ENST00000568743 JAG2Q9Y219 1238 aa12.47□□□□□ -0.41
PKM-221ENST00000568743 GJA3Q9Y6H8 435 aa12.47□□□□□ -0.41
PKM-221ENST00000568743 ZC3H4Q9UPT8 1303 aaKnown RBP12.46□□□□□ -0.41
PKM-221ENST00000568743 PSMD14O00487 310 aa12.46□□□□□ -0.41
PKM-221ENST00000568743 DDNO94850 711 aaPredicted RBP12.46□□□□□ -0.41
PKM-221ENST00000568743 PHKA1P46020 1223 aa12.46□□□□□ -0.41
PKM-221ENST00000568743 CIAPIN1Q6FI81 312 aa12.46□□□□□ -0.41
PKM-221ENST00000568743 AACSQ86V21 672 aa12.46□□□□□ -0.41
PKM-221ENST00000568743 XAGE2Q96GT9 111 aa12.46□□□□□ -0.41
PKM-221ENST00000568743 DBNDD2Q9BQY9 259 aa12.46□□□□□ -0.41
PKM-221ENST00000568743 LRRCC1Q9C099 1032 aa12.46□□□□□ -0.41
PKM-221ENST00000568743 CHD4Q14839 1912 aa12.45□□□□□ -0.42
PKM-221ENST00000568743 IL1R1P14778 569 aa12.45□□□□□ -0.42
PKM-221ENST00000568743 GTF2IP78347 998 aa12.45□□□□□ -0.42
PKM-221ENST00000568743 CHAF1AQ13111 956 aaPredicted RBP12.45□□□□□ -0.42
PKM-221ENST00000568743 GORABQ5T7V8 394 aa12.45□□□□□ -0.42
PKM-221ENST00000568743 PODNQ7Z5L7 613 aa12.45□□□□□ -0.42
PKM-221ENST00000568743 PIAS4Q8N2W9 510 aaPredicted RBP12.45□□□□□ -0.42
PKM-221ENST00000568743 MXD3Q9BW11 206 aa12.45□□□□□ -0.42
PKM-221ENST00000568743 GPR108Q9NPR9 543 aa12.45□□□□□ -0.42
PKM-221ENST00000568743 DBNLQ9UJU6 430 aaKnown RBP12.45□□□□□ -0.42
PKM-221ENST00000568743 DICER1Q9UPY3 1922 aaKnown RBP12.45□□□□□ -0.42
PKM-221ENST00000568743 GLTPD2A6NH11 291 aa12.44□□□□□ -0.42
PKM-221ENST00000568743 FRAT2O75474 233 aaPredicted RBP12.44□□□□□ -0.42
PKM-221ENST00000568743 CCDC102BQ68D86 513 aa12.44□□□□□ -0.42
PKM-221ENST00000568743 B4GALNT3Q6L9W6 998 aa12.44□□□□□ -0.42
PKM-221ENST00000568743 DPY19L2Q6NUT2 758 aa12.44□□□□□ -0.42
PKM-221ENST00000568743 CLASRPQ8N2M8 674 aaKnown RBP12.44□□□□□ -0.42
PKM-221ENST00000568743 TDRD7Q8NHU6 1098 aaKnown RBP12.44□□□□□ -0.42
PKM-221ENST00000568743 ZBTB12Q9Y330 459 aaPredicted RBP12.44□□□□□ -0.42
PKM-221ENST00000568743 COL1A1P02452 1464 aaPredicted RBP12.43□□□□□ -0.42
PKM-221ENST00000568743 USP17L3A6NCW0 530 aa12.43□□□□□ -0.42
PKM-221ENST00000568743 USP17L4A6NCW7 530 aa12.43□□□□□ -0.42
PKM-221ENST00000568743 IFIT2P09913 472 aaKnown RBP12.43□□□□□ -0.42
PKM-221ENST00000568743 GMPSP49915 693 aaPredicted RBP12.43□□□□□ -0.42
PKM-221ENST00000568743 TNIP1Q15025 636 aa12.43□□□□□ -0.42
PKM-221ENST00000568743 ANKRD45Q5TZF3 282 aa12.43□□□□□ -0.42
PKM-221ENST00000568743 TTLL5Q6EMB2 1281 aa12.43□□□□□ -0.42
PKM-221ENST00000568743 USP17L1Q7RTZ2 530 aa12.43□□□□□ -0.42
PKM-221ENST00000568743 GPC2Q8N158 579 aa12.43□□□□□ -0.42
PKM-221ENST00000568743 GCC1Q96CN9 775 aa12.43□□□□□ -0.42
PKM-221ENST00000568743 SCN9AQ15858 1988 aa12.43□□□□□ -0.42
PKM-221ENST00000568743 ARAP2Q8WZ64 1704 aa12.42□□□□□ -0.42
PKM-221ENST00000568743 VIL1P09327 827 aaKnown RBP12.42□□□□□ -0.42
PKM-221ENST00000568743 TTC39AQ5SRH9 613 aa12.42□□□□□ -0.42
PKM-221ENST00000568743 DACT2Q5SW24 774 aa12.42□□□□□ -0.42
PKM-221ENST00000568743 PI16Q6UXB8 463 aa12.42□□□□□ -0.42
PKM-221ENST00000568743 GNL3LQ9NVN8 582 aaKnown RBP12.42□□□□□ -0.42
PKM-221ENST00000568743 KDM2BQ8NHM5 1336 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms