RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, human

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHDC4-223	ENST00000568499	NIM1K	Q8IY84	436 aa		18.34	■□□□□ 0.53
KLHDC4-223	ENST00000568499	NEUROD6	Q96NK8	337 aa		18.34	■□□□□ 0.53
KLHDC4-223	ENST00000568499	RNF181	Q9P0P0	153 aa		18.33	■□□□□ 0.52
KLHDC4-223	ENST00000568499		A0A1B0GUL7	405 aa		18.32	■□□□□ 0.52
KLHDC4-223	ENST00000568499	FGFR2	P21802	821 aa		18.32	■□□□□ 0.52
KLHDC4-223	ENST00000568499	TNNI3K	Q59H18	835 aa		18.32	■□□□□ 0.52
KLHDC4-223	ENST00000568499	C9orf131	Q5VYM1	1079 aa		18.32	■□□□□ 0.52
KLHDC4-223	ENST00000568499	CCDC136	Q96JN2	1154 aa		18.32	■□□□□ 0.52
KLHDC4-223	ENST00000568499	COA1	Q9GZY4	146 aa		18.32	■□□□□ 0.52
KLHDC4-223	ENST00000568499	GNL3L	Q9NVN8	582 aa	Known RBP	18.32	■□□□□ 0.52
KLHDC4-223	ENST00000568499	FPGT-TNNI3K	V9GXZ4	949 aa		18.32	■□□□□ 0.52
KLHDC4-223	ENST00000568499	FER1L6	Q2WGJ9	1857 aa		18.31	■□□□□ 0.52
KLHDC4-223	ENST00000568499	IFIT2	P09913	472 aa	Known RBP	18.31	■□□□□ 0.52
KLHDC4-223	ENST00000568499	HIBADH	P31937	336 aa	Known RBP	18.31	■□□□□ 0.52
KLHDC4-223	ENST00000568499	TIMM10	P62072	90 aa		18.31	■□□□□ 0.52
KLHDC4-223	ENST00000568499	GPR101	Q96P66	508 aa	Predicted RBP	18.31	■□□□□ 0.52
KLHDC4-223	ENST00000568499	GOLGB1	Q14789	3259 aa	Known RBP	18.31	■□□□□ 0.52
KLHDC4-223	ENST00000568499	SNAP23	O00161	211 aa		18.3	■□□□□ 0.52
KLHDC4-223	ENST00000568499	FRAT2	O75474	233 aa	Predicted RBP	18.3	■□□□□ 0.52
KLHDC4-223	ENST00000568499	IGHD	P01880	384 aa		18.3	■□□□□ 0.52
KLHDC4-223	ENST00000568499	ANKRD45	Q5TZF3	282 aa		18.3	■□□□□ 0.52
KLHDC4-223	ENST00000568499	PODN	Q7Z5L7	613 aa		18.3	■□□□□ 0.52
KLHDC4-223	ENST00000568499	AACS	Q86V21	672 aa		18.3	■□□□□ 0.52
KLHDC4-223	ENST00000568499	BCL11A	Q9H165	835 aa		18.3	■□□□□ 0.52
KLHDC4-223	ENST00000568499	IL1RAPL2	Q9NP60	686 aa		18.3	■□□□□ 0.52
KLHDC4-223	ENST00000568499	ZNRF3	Q9ULT6	936 aa		18.3	■□□□□ 0.52
KLHDC4-223	ENST00000568499	WTIP	A6NIX2	430 aa	Predicted RBP	18.29	■□□□□ 0.52
KLHDC4-223	ENST00000568499	EIF6	P56537	245 aa	Known RBP	18.29	■□□□□ 0.52
KLHDC4-223	ENST00000568499	DOK7	Q18PE1	504 aa		18.29	■□□□□ 0.52
KLHDC4-223	ENST00000568499	CCDC158	Q5M9N0	1113 aa		18.29	■□□□□ 0.52
KLHDC4-223	ENST00000568499	SMC5	Q8IY18	1101 aa		18.29	■□□□□ 0.52
KLHDC4-223	ENST00000568499	XAGE2	Q96GT9	111 aa		18.29	■□□□□ 0.52
KLHDC4-223	ENST00000568499	PPP4R2	Q9NY27	417 aa		18.29	■□□□□ 0.52
KLHDC4-223	ENST00000568499	DUOX1	Q9NRD9	1551 aa		18.29	■□□□□ 0.52
KLHDC4-223	ENST00000568499	ZC3H4	Q9UPT8	1303 aa	Known RBP	18.28	■□□□□ 0.52
KLHDC4-223	ENST00000568499	ECE2	O60344	883 aa		18.28	■□□□□ 0.52
KLHDC4-223	ENST00000568499	GYG1	P46976	350 aa		18.28	■□□□□ 0.52
KLHDC4-223	ENST00000568499	FAM84B	Q96KN1	310 aa	Predicted RBP	18.28	■□□□□ 0.52
KLHDC4-223	ENST00000568499	DBNDD1	Q9H9R9	158 aa		18.28	■□□□□ 0.52
KLHDC4-223	ENST00000568499	LTBP1	Q14766	1721 aa		18.27	■□□□□ 0.52
KLHDC4-223	ENST00000568499	KLRK1	P26718	216 aa		18.27	■□□□□ 0.52
KLHDC4-223	ENST00000568499	FBXO33	Q7Z6M2	555 aa		18.27	■□□□□ 0.52
KLHDC4-223	ENST00000568499	TXNRD3	Q86VQ6	643 aa		18.27	■□□□□ 0.52
KLHDC4-223	ENST00000568499	EAF2	Q96CJ1	260 aa	Predicted RBP	18.27	■□□□□ 0.52
KLHDC4-223	ENST00000568499	GPATCH3	Q96I76	525 aa		18.27	■□□□□ 0.52
KLHDC4-223	ENST00000568499	CD209	Q9NNX6	404 aa		18.27	■□□□□ 0.52
KLHDC4-223	ENST00000568499	ZNF609	O15014	1411 aa		18.26	■□□□□ 0.51
KLHDC4-223	ENST00000568499	UQCRFS1P1	P0C7P4	283 aa		18.26	■□□□□ 0.51
KLHDC4-223	ENST00000568499	BCAM	P50895	628 aa		18.26	■□□□□ 0.51
KLHDC4-223	ENST00000568499	TNIP1	Q15025	636 aa		18.26	■□□□□ 0.51
KLHDC4-223	ENST00000568499	TTC39A	Q5SRH9	613 aa		18.26	■□□□□ 0.51
KLHDC4-223	ENST00000568499	B4GALNT3	Q6L9W6	998 aa		18.26	■□□□□ 0.51
KLHDC4-223	ENST00000568499	DPY19L2	Q6NUT2	758 aa		18.26	■□□□□ 0.51
KLHDC4-223	ENST00000568499	CENPQ	Q7L2Z9	268 aa	Predicted RBP	18.26	■□□□□ 0.51
KLHDC4-223	ENST00000568499	CCDC8	Q9H0W5	538 aa	Predicted RBP	18.26	■□□□□ 0.51
KLHDC4-223	ENST00000568499	IRS2	Q9Y4H2	1338 aa		18.25	■□□□□ 0.51
KLHDC4-223	ENST00000568499	FZD9	O00144	591 aa		18.25	■□□□□ 0.51
KLHDC4-223	ENST00000568499	SEMA3E	O15041	775 aa		18.25	■□□□□ 0.51
KLHDC4-223	ENST00000568499	SMARCA5	O60264	1052 aa	Predicted RBP	18.25	■□□□□ 0.51
KLHDC4-223	ENST00000568499	IL1R1	P14778	569 aa		18.25	■□□□□ 0.51
KLHDC4-223	ENST00000568499	PRELP	P51888	382 aa		18.25	■□□□□ 0.51
KLHDC4-223	ENST00000568499	CCDC102B	Q68D86	513 aa		18.25	■□□□□ 0.51
KLHDC4-223	ENST00000568499	ADORA1	P30542	326 aa		18.24	■□□□□ 0.51
KLHDC4-223	ENST00000568499	CHD1L	Q86WJ1	897 aa		18.24	■□□□□ 0.51
KLHDC4-223	ENST00000568499	FBXW7	Q969H0	707 aa		18.24	■□□□□ 0.51
KLHDC4-223	ENST00000568499	DBNDD2	Q9BQY9	259 aa		18.24	■□□□□ 0.51
KLHDC4-223	ENST00000568499	DENND2A	Q9ULE3	1009 aa		18.24	■□□□□ 0.51
KLHDC4-223	ENST00000568499	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	18.24	■□□□□ 0.51
KLHDC4-223	ENST00000568499	USP17L3	A6NCW0	530 aa		18.23	■□□□□ 0.51
KLHDC4-223	ENST00000568499	USP17L4	A6NCW7	530 aa		18.23	■□□□□ 0.51
KLHDC4-223	ENST00000568499	NUCB1	Q02818	461 aa		18.23	■□□□□ 0.51
KLHDC4-223	ENST00000568499	CIAPIN1	Q6FI81	312 aa		18.23	■□□□□ 0.51
KLHDC4-223	ENST00000568499	USP17L1	Q7RTZ2	530 aa		18.23	■□□□□ 0.51
KLHDC4-223	ENST00000568499	TDRD7	Q8NHU6	1098 aa	Known RBP	18.23	■□□□□ 0.51
KLHDC4-223	ENST00000568499	DBNL	Q9UJU6	430 aa	Known RBP	18.23	■□□□□ 0.51
KLHDC4-223	ENST00000568499		A0A1B0GUL6	1792 aa		18.22	■□□□□ 0.51
KLHDC4-223	ENST00000568499	PHKA1	P46020	1223 aa		18.22	■□□□□ 0.51
KLHDC4-223	ENST00000568499	STRIP1	Q5VSL9	837 aa		18.22	■□□□□ 0.51
KLHDC4-223	ENST00000568499	TTLL5	Q6EMB2	1281 aa		18.22	■□□□□ 0.51
KLHDC4-223	ENST00000568499	ZBTB22	O15209	634 aa		18.21	■□□□□ 0.51
KLHDC4-223	ENST00000568499	RAD17	O75943	681 aa		18.21	■□□□□ 0.51
KLHDC4-223	ENST00000568499	GTF2I	P78347	998 aa		18.21	■□□□□ 0.51
KLHDC4-223	ENST00000568499	TBC1D22A	Q8WUA7	517 aa		18.21	■□□□□ 0.51
KLHDC4-223	ENST00000568499	ZNF512B	Q96KM6	892 aa	Predicted RBP	18.21	■□□□□ 0.51
KLHDC4-223	ENST00000568499	LNPK	Q9C0E8	428 aa		18.21	■□□□□ 0.51
KLHDC4-223	ENST00000568499	YDJC	A8MPS7	323 aa		18.2	■□□□□ 0.5
KLHDC4-223	ENST00000568499	ARID4A	P29374	1257 aa	Predicted RBP	18.2	■□□□□ 0.5
KLHDC4-223	ENST00000568499	CXCL9	Q07325	125 aa		18.2	■□□□□ 0.5
KLHDC4-223	ENST00000568499	GPC2	Q8N158	579 aa		18.2	■□□□□ 0.5
KLHDC4-223	ENST00000568499	WDR66	Q8TBY9	1149 aa		18.2	■□□□□ 0.5
KLHDC4-223	ENST00000568499	TLR7	Q9NYK1	1049 aa	Known RBP	18.2	■□□□□ 0.5
KLHDC4-223	ENST00000568499	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	18.2	■□□□□ 0.5
KLHDC4-223	ENST00000568499	GJA3	Q9Y6H8	435 aa		18.2	■□□□□ 0.5
KLHDC4-223	ENST00000568499	MYO3B	Q8WXR4	1341 aa		18.2	■□□□□ 0.5
KLHDC4-223	ENST00000568499	ERC2	O15083	957 aa		18.19	■□□□□ 0.5
KLHDC4-223	ENST00000568499	SBF1	O95248	1867 aa		18.19	■□□□□ 0.5
KLHDC4-223	ENST00000568499	CHAF1A	Q13111	956 aa	Predicted RBP	18.19	■□□□□ 0.5
KLHDC4-223	ENST00000568499	ZGPAT	Q8N5A5	531 aa	Known RBP	18.19	■□□□□ 0.5
KLHDC4-223	ENST00000568499	ECHDC1	Q9NTX5	307 aa		18.19	■□□□□ 0.5
KLHDC4-223	ENST00000568499	FAM205A	Q6ZU69	1335 aa		18.19	■□□□□ 0.5

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