RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 HINFPQ9BQA5 517 aa8.07□□□□□ -1.12
CAPN3-218ENST00000568153 TSPAN10Q9H1Z9 355 aaPredicted RBP8.07□□□□□ -1.12
CAPN3-218ENST00000568153 POLKQ9UBT6 870 aa8.07□□□□□ -1.12
CAPN3-218ENST00000568153 DYRK1BQ9Y463 629 aa8.07□□□□□ -1.12
CAPN3-218ENST00000568153 SETD1AO15047 1707 aaKnown RBP8.06□□□□□ -1.12
CAPN3-218ENST00000568153 CARNS1A5YM72 827 aa8.06□□□□□ -1.12
CAPN3-218ENST00000568153 TMEM88BA6NKF7 163 aa8.06□□□□□ -1.12
CAPN3-218ENST00000568153 APAF1O14727 1248 aa8.06□□□□□ -1.12
CAPN3-218ENST00000568153 PPM1GO15355 546 aaPredicted RBP8.06□□□□□ -1.12
CAPN3-218ENST00000568153 DIAPH1O60610 1272 aaKnown RBP8.06□□□□□ -1.12
CAPN3-218ENST00000568153 NEFLP07196 543 aa8.06□□□□□ -1.12
CAPN3-218ENST00000568153 U2AF1L5P0DN76 240 aaPredicted RBP8.06□□□□□ -1.12
CAPN3-218ENST00000568153 U2AF1Q01081 240 aaKnown RBP eCLIP8.06□□□□□ -1.12
CAPN3-218ENST00000568153 INSM1Q01101 510 aaPredicted RBP8.06□□□□□ -1.12
CAPN3-218ENST00000568153 KRT76Q01546 638 aa8.06□□□□□ -1.12
CAPN3-218ENST00000568153 C4orf17Q53FE4 359 aa8.06□□□□□ -1.12
CAPN3-218ENST00000568153 TAS1R3Q7RTX0 852 aa8.06□□□□□ -1.12
CAPN3-218ENST00000568153 SLC9A9Q8IVB4 645 aa8.06□□□□□ -1.12
CAPN3-218ENST00000568153 RHBDD1Q8TEB9 315 aa8.06□□□□□ -1.12
CAPN3-218ENST00000568153 RUNDC1Q96C34 613 aa8.06□□□□□ -1.12
CAPN3-218ENST00000568153 SUPT16HQ9Y5B9 1047 aaKnown RBP8.06□□□□□ -1.12
CAPN3-218ENST00000568153 TTC21AQ8NDW8 1320 aa8.05□□□□□ -1.12
CAPN3-218ENST00000568153 MYOM1P52179 1685 aa8.05□□□□□ -1.12
CAPN3-218ENST00000568153 C21orf2O43822 256 aa8.05□□□□□ -1.12
CAPN3-218ENST00000568153 CSB-PGBD3P0DP91 1061 aa8.05□□□□□ -1.12
CAPN3-218ENST00000568153 ATF3P18847 181 aa8.05□□□□□ -1.12
CAPN3-218ENST00000568153 GTF2E1P29083 439 aaPredicted RBP8.05□□□□□ -1.12
CAPN3-218ENST00000568153 PHKA2P46019 1235 aa8.05□□□□□ -1.12
CAPN3-218ENST00000568153 SWI5Q1ZZU3 235 aa8.05□□□□□ -1.12
CAPN3-218ENST00000568153 CCDC146Q8IYE0 955 aa8.05□□□□□ -1.12
CAPN3-218ENST00000568153 VWA5B2Q8N398 1253 aa8.05□□□□□ -1.12
CAPN3-218ENST00000568153 RETREG2Q8NC44 543 aa8.05□□□□□ -1.12
CAPN3-218ENST00000568153 SLAIN2Q9P270 581 aa8.05□□□□□ -1.12
CAPN3-218ENST00000568153 CDC14CA4D256 554 aa8.04□□□□□ -1.12
CAPN3-218ENST00000568153 U2SURPO15042 1029 aaKnown RBP8.04□□□□□ -1.12
CAPN3-218ENST00000568153 FBLN1P23142 703 aa8.04□□□□□ -1.12
CAPN3-218ENST00000568153 GNASQ5JWF2 1037 aa8.04□□□□□ -1.12
CAPN3-218ENST00000568153 GAS2L2Q8NHY3 880 aa8.04□□□□□ -1.12
CAPN3-218ENST00000568153 ZDHHC1Q8WTX9 485 aa8.04□□□□□ -1.12
CAPN3-218ENST00000568153 ANKARQ7Z5J8 1434 aa8.03□□□□□ -1.12
CAPN3-218ENST00000568153 AATKQ6ZMQ8 1374 aa8.03□□□□□ -1.12
CAPN3-218ENST00000568153 WEE1P30291 646 aa8.03□□□□□ -1.12
CAPN3-218ENST00000568153 SV2AQ7L0J3 742 aa8.03□□□□□ -1.12
CAPN3-218ENST00000568153 TRIM22Q8IYM9 498 aa8.03□□□□□ -1.12
CAPN3-218ENST00000568153 ABTB2Q8N961 1025 aa8.03□□□□□ -1.12
CAPN3-218ENST00000568153 SCG3Q8WXD2 468 aaKnown RBP8.03□□□□□ -1.12
CAPN3-218ENST00000568153 NIFKQ9BYG3 293 aaKnown RBP8.03□□□□□ -1.12
CAPN3-218ENST00000568153 TIMMDC1Q9NPL8 285 aa8.03□□□□□ -1.12
CAPN3-218ENST00000568153 PARP3Q9Y6F1 533 aa8.03□□□□□ -1.12
CAPN3-218ENST00000568153 KNDC1Q76NI1 1749 aa8.03□□□□□ -1.12
CAPN3-218ENST00000568153 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.03□□□□□ -1.12
CAPN3-218ENST00000568153 SMG6Q86US8 1419 aaKnown RBP8.03□□□□□ -1.12
CAPN3-218ENST00000568153 ZNF142P52746 1687 aaPredicted RBP8.02□□□□□ -1.13
CAPN3-218ENST00000568153 PNPLA6Q8IY17 1366 aa8.02□□□□□ -1.13
CAPN3-218ENST00000568153 PRMT3O60678 531 aa8.02□□□□□ -1.13
CAPN3-218ENST00000568153 NEFMP07197 916 aa8.02□□□□□ -1.13
CAPN3-218ENST00000568153 PLA2G4AP47712 749 aa8.02□□□□□ -1.13
CAPN3-218ENST00000568153 RNFT1Q5M7Z0 435 aa8.02□□□□□ -1.13
CAPN3-218ENST00000568153 SH3PXD2AQ5TCZ1 1133 aa8.02□□□□□ -1.13
CAPN3-218ENST00000568153 TCP11L2Q8N4U5 519 aa8.02□□□□□ -1.13
CAPN3-218ENST00000568153 ZNF837Q96EG3 531 aaPredicted RBP8.02□□□□□ -1.13
CAPN3-218ENST00000568153 PRIMPOLQ96LW4 560 aa8.02□□□□□ -1.13
CAPN3-218ENST00000568153 COL25A1Q9BXS0 654 aaPredicted RBP8.02□□□□□ -1.13
CAPN3-218ENST00000568153 BLMP54132 1417 aaPredicted RBP8.02□□□□□ -1.13
CAPN3-218ENST00000568153 USP32Q8NFA0 1604 aa8.01□□□□□ -1.13
CAPN3-218ENST00000568153 THBS1P07996 1170 aa8.01□□□□□ -1.13
CAPN3-218ENST00000568153 IL13P35225 146 aa8.01□□□□□ -1.13
CAPN3-218ENST00000568153 PSMA6P60900 246 aaKnown RBP8.01□□□□□ -1.13
CAPN3-218ENST00000568153 RRS1Q15050 365 aaKnown RBP8.01□□□□□ -1.13
CAPN3-218ENST00000568153 TEAD4Q15561 434 aa8.01□□□□□ -1.13
CAPN3-218ENST00000568153 OCLNQ16625 522 aa8.01□□□□□ -1.13
CAPN3-218ENST00000568153 DBN1Q16643 649 aa8.01□□□□□ -1.13
CAPN3-218ENST00000568153 CLP1Q92989 425 aaKnown RBP8.01□□□□□ -1.13
CAPN3-218ENST00000568153 GMCL1Q96IK5 515 aa8.01□□□□□ -1.13
CAPN3-218ENST00000568153 ORAI2Q96SN7 254 aa8.01□□□□□ -1.13
CAPN3-218ENST00000568153 GAS2L1Q99501 681 aaPredicted RBP8.01□□□□□ -1.13
CAPN3-218ENST00000568153 USP6P35125 1406 aa8.01□□□□□ -1.13
CAPN3-218ENST00000568153 SSH2Q76I76 1423 aa8.01□□□□□ -1.13
CAPN3-218ENST00000568153 NCOA3Q9Y6Q9 1424 aa8.01□□□□□ -1.13
CAPN3-218ENST00000568153 ADGRB2O60241 1585 aa8.01□□□□□ -1.13
CAPN3-218ENST00000568153 A0A1B0GTH6 734 aa8□□□□□ -1.13
CAPN3-218ENST00000568153 FOXO3O43524 673 aa8□□□□□ -1.13
CAPN3-218ENST00000568153 PPP1R12BO60237 982 aaPredicted RBP8□□□□□ -1.13
CAPN3-218ENST00000568153 F11P03951 625 aa8□□□□□ -1.13
CAPN3-218ENST00000568153 IGFBP4P22692 258 aa8□□□□□ -1.13
CAPN3-218ENST00000568153 NOS2P35228 1153 aa8□□□□□ -1.13
CAPN3-218ENST00000568153 SLFN5Q08AF3 891 aa8□□□□□ -1.13
CAPN3-218ENST00000568153 ERICH6BQ5W0A0 696 aa8□□□□□ -1.13
CAPN3-218ENST00000568153 POTEAQ6S8J7 498 aa8□□□□□ -1.13
CAPN3-218ENST00000568153 RIPOR1Q6ZS17 1223 aa8□□□□□ -1.13
CAPN3-218ENST00000568153 KRT28Q7Z3Y7 464 aa8□□□□□ -1.13
CAPN3-218ENST00000568153 WDR63Q8IWG1 891 aa8□□□□□ -1.13
CAPN3-218ENST00000568153 ZSCAN1Q8NBB4 408 aa8□□□□□ -1.13
CAPN3-218ENST00000568153 PLEKHF1Q96S99 279 aa8□□□□□ -1.13
CAPN3-218ENST00000568153 USTQ9Y2C2 406 aa8□□□□□ -1.13
CAPN3-218ENST00000568153 ADGRL3Q9HAR2 1447 aa8□□□□□ -1.13
CAPN3-218ENST00000568153 CDC42BPGQ6DT37 1551 aa8□□□□□ -1.13
CAPN3-218ENST00000568153 TMEM94Q12767 1356 aa7.99□□□□□ -1.13
CAPN3-218ENST00000568153 USP31Q70CQ4 1352 aa7.99□□□□□ -1.13
CAPN3-218ENST00000568153 SERTM1A2A2V5 107 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms