RNA–Protein interactions for RNA: ENST00000567811.1

SMPD3-210, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-210ENST00000567811 SUCLG2Q96I99 432 aa9.05□□□□□ -0.96
SMPD3-210ENST00000567811 CNNM1Q9NRU3 951 aa9.05□□□□□ -0.96
SMPD3-210ENST00000567811 MKRN1Q9UHC7 482 aaKnown RBP9.05□□□□□ -0.96
SMPD3-210ENST00000567811 MED23Q9ULK4 1368 aa9.04□□□□□ -0.96
SMPD3-210ENST00000567811 TRAF5O00463 557 aa9.04□□□□□ -0.96
SMPD3-210ENST00000567811 USP17L8P0C7I0 530 aa9.04□□□□□ -0.96
SMPD3-210ENST00000567811 RARSP54136 660 aaKnown RBP9.04□□□□□ -0.96
SMPD3-210ENST00000567811 STRIP1Q5VSL9 837 aa9.04□□□□□ -0.96
SMPD3-210ENST00000567811 C15orf52Q6ZUT6 534 aaKnown RBP9.04□□□□□ -0.96
SMPD3-210ENST00000567811 USP48Q86UV5 1035 aa9.04□□□□□ -0.96
SMPD3-210ENST00000567811 TRPM4Q8TD43 1214 aa9.04□□□□□ -0.96
SMPD3-210ENST00000567811 ARHGAP45Q92619 1136 aa9.04□□□□□ -0.96
SMPD3-210ENST00000567811 DCPSQ96C86 337 aaKnown RBP9.04□□□□□ -0.96
SMPD3-210ENST00000567811 GMLQ99445 158 aa9.04□□□□□ -0.96
SMPD3-210ENST00000567811 API5Q9BZZ5 524 aaKnown RBP9.04□□□□□ -0.96
SMPD3-210ENST00000567811 BICC1Q9H694 974 aaKnown RBP9.04□□□□□ -0.96
SMPD3-210ENST00000567811 HDAC5Q9UQL6 1122 aa9.04□□□□□ -0.96
SMPD3-210ENST00000567811 CEP350Q5VT06 3117 aa9.04□□□□□ -0.96
SMPD3-210ENST00000567811 SNAP23O00161 211 aa9.03□□□□□ -0.96
SMPD3-210ENST00000567811 IPO8O15397 1037 aaKnown RBP9.03□□□□□ -0.96
SMPD3-210ENST00000567811 MMP14P50281 582 aa9.03□□□□□ -0.96
SMPD3-210ENST00000567811 ZNF280AP59817 542 aaPredicted RBP9.03□□□□□ -0.96
SMPD3-210ENST00000567811 GTF2IP78347 998 aa9.03□□□□□ -0.96
SMPD3-210ENST00000567811 HNRNPUQ00839 825 aaKnown RBP eCLIP9.03□□□□□ -0.96
SMPD3-210ENST00000567811 SCARF1Q14162 830 aa9.03□□□□□ -0.96
SMPD3-210ENST00000567811 RABL6Q3YEC7 729 aaPredicted RBP9.03□□□□□ -0.96
SMPD3-210ENST00000567811 OGFOD1Q8N543 542 aa9.03□□□□□ -0.96
SMPD3-210ENST00000567811 FBXW7Q969H0 707 aa9.03□□□□□ -0.96
SMPD3-210ENST00000567811 GLIS2Q9BZE0 524 aaPredicted RBP9.03□□□□□ -0.96
SMPD3-210ENST00000567811 PUS3Q9BZE2 481 aaKnown RBP9.03□□□□□ -0.96
SMPD3-210ENST00000567811 CD209Q9NNX6 404 aa9.03□□□□□ -0.96
SMPD3-210ENST00000567811 ABT1Q9ULW3 272 aaKnown RBP9.03□□□□□ -0.96
SMPD3-210ENST00000567811 RIPOR2Q9Y4F9 1068 aa9.03□□□□□ -0.96
SMPD3-210ENST00000567811 RASSF10A6NK89 507 aa9.02□□□□□ -0.97
SMPD3-210ENST00000567811 CELF2O95319 508 aaKnown RBP9.02□□□□□ -0.97
SMPD3-210ENST00000567811 EGFRP00533 1210 aa9.02□□□□□ -0.97
SMPD3-210ENST00000567811 VEGFBP49765 207 aa9.02□□□□□ -0.97
SMPD3-210ENST00000567811 UBE4AQ14139 1066 aa9.02□□□□□ -0.97
SMPD3-210ENST00000567811 KIF4BQ2VIQ3 1234 aa9.02□□□□□ -0.97
SMPD3-210ENST00000567811 DACT2Q5SW24 774 aa9.02□□□□□ -0.97
SMPD3-210ENST00000567811 KRT26Q7Z3Y9 468 aa9.02□□□□□ -0.97
SMPD3-210ENST00000567811 MYOZ2Q9NPC6 264 aa9.02□□□□□ -0.97
SMPD3-210ENST00000567811 CNTNAP1P78357 1384 aa9.01□□□□□ -0.97
SMPD3-210ENST00000567811 SASH1O94885 1247 aa9.01□□□□□ -0.97
SMPD3-210ENST00000567811 IL1R1P14778 569 aa9.01□□□□□ -0.97
SMPD3-210ENST00000567811 KLRK1P26718 216 aa9.01□□□□□ -0.97
SMPD3-210ENST00000567811 ZNF804AQ7Z570 1209 aa9.01□□□□□ -0.97
SMPD3-210ENST00000567811 ANKRD44Q8N8A2 993 aa9.01□□□□□ -0.97
SMPD3-210ENST00000567811 MXD3Q9BW11 206 aa9.01□□□□□ -0.97
SMPD3-210ENST00000567811 HDAC9Q9UKV0 1011 aa9.01□□□□□ -0.97
SMPD3-210ENST00000567811 TLL2Q9Y6L7 1015 aa9.01□□□□□ -0.97
SMPD3-210ENST00000567811 MROH5Q6ZUA9 1318 aa9.01□□□□□ -0.97
SMPD3-210ENST00000567811 MYO3BQ8WXR4 1341 aa9.01□□□□□ -0.97
SMPD3-210ENST00000567811 WDR33Q9C0J8 1336 aaKnown RBP9.01□□□□□ -0.97
SMPD3-210ENST00000567811 BCAR3O75815 825 aa9□□□□□ -0.97
SMPD3-210ENST00000567811 UBTFL1P0CB47 393 aaPredicted RBP9□□□□□ -0.97
SMPD3-210ENST00000567811 HIBADHP31937 336 aaKnown RBP9□□□□□ -0.97
SMPD3-210ENST00000567811 ECE1P42892 770 aa9□□□□□ -0.97
SMPD3-210ENST00000567811 LRRC24Q50LG9 513 aa9□□□□□ -0.97
SMPD3-210ENST00000567811 INTS3Q68E01 1043 aaKnown RBP9□□□□□ -0.97
SMPD3-210ENST00000567811 DLK2Q6UY11 383 aa9□□□□□ -0.97
SMPD3-210ENST00000567811 SAPCD2Q86UD0 394 aa9□□□□□ -0.97
SMPD3-210ENST00000567811 SULF1Q8IWU6 871 aa9□□□□□ -0.97
SMPD3-210ENST00000567811 C2orf69Q8N8R5 385 aa9□□□□□ -0.97
SMPD3-210ENST00000567811 FAM84BQ96KN1 310 aaPredicted RBP9□□□□□ -0.97
SMPD3-210ENST00000567811 ZNF408Q9H9D4 720 aa9□□□□□ -0.97
SMPD3-210ENST00000567811 IRS2Q9Y4H2 1338 aa9□□□□□ -0.97
SMPD3-210ENST00000567811 PDE8BO95263 885 aa8.99□□□□□ -0.97
SMPD3-210ENST00000567811 HSPA1AP0DMV8 641 aaKnown RBP8.99□□□□□ -0.97
SMPD3-210ENST00000567811 HSPA1BP0DMV9 641 aaKnown RBP8.99□□□□□ -0.97
SMPD3-210ENST00000567811 GYG1P46976 350 aa8.99□□□□□ -0.97
SMPD3-210ENST00000567811 FKBP1AP62942 108 aaKnown RBP8.99□□□□□ -0.97
SMPD3-210ENST00000567811 NBPF9Q3BBW0 867 aa8.99□□□□□ -0.97
SMPD3-210ENST00000567811 METTL24Q5JXM2 366 aa8.99□□□□□ -0.97
SMPD3-210ENST00000567811 ANGEL2Q5VTE6 544 aaKnown RBP8.99□□□□□ -0.97
SMPD3-210ENST00000567811 PAXIP1Q6ZW49 1069 aaPredicted RBP8.99□□□□□ -0.97
SMPD3-210ENST00000567811 KIAA0825Q8IV33 1275 aa8.99□□□□□ -0.97
SMPD3-210ENST00000567811 TDRD7Q8NHU6 1098 aaKnown RBP8.99□□□□□ -0.97
SMPD3-210ENST00000567811 KLHDC4Q8TBB5 520 aa8.99□□□□□ -0.97
SMPD3-210ENST00000567811 FRAT1Q92837 279 aaPredicted RBP8.99□□□□□ -0.97
SMPD3-210ENST00000567811 HHIPL1Q96JK4 782 aa8.99□□□□□ -0.97
SMPD3-210ENST00000567811 A0A1B0GUL6 1792 aa8.99□□□□□ -0.97
SMPD3-210ENST00000567811 ZNF609O15014 1411 aa8.98□□□□□ -0.97
SMPD3-210ENST00000567811 EYA2O00167 538 aa8.98□□□□□ -0.97
SMPD3-210ENST00000567811 WNT10BO00744 389 aa8.98□□□□□ -0.97
SMPD3-210ENST00000567811 GNAI3P08754 354 aa8.98□□□□□ -0.97
SMPD3-210ENST00000567811 MAP2K2P36507 400 aa8.98□□□□□ -0.97
SMPD3-210ENST00000567811 RFX5P48382 616 aaPredicted RBP8.98□□□□□ -0.97
SMPD3-210ENST00000567811 MAP2K1Q02750 393 aaPredicted RBP8.98□□□□□ -0.97
SMPD3-210ENST00000567811 PTPN12Q05209 780 aaKnown RBP8.98□□□□□ -0.97
SMPD3-210ENST00000567811 CAVIN4Q5BKX8 364 aa8.98□□□□□ -0.97
SMPD3-210ENST00000567811 CYP4F22Q6NT55 531 aa8.98□□□□□ -0.97
SMPD3-210ENST00000567811 ATF7IPQ6VMQ6 1270 aa8.98□□□□□ -0.97
SMPD3-210ENST00000567811 FBXO33Q7Z6M2 555 aa8.98□□□□□ -0.97
SMPD3-210ENST00000567811 VPS37DQ86XT2 251 aa8.98□□□□□ -0.97
SMPD3-210ENST00000567811 CAPNS2Q96L46 248 aa8.98□□□□□ -0.97
SMPD3-210ENST00000567811 WBP1LQ9NX94 342 aa8.98□□□□□ -0.97
SMPD3-210ENST00000567811 GGA3Q9NZ52 723 aa8.98□□□□□ -0.97
SMPD3-210ENST00000567811 FBXO3Q9UK99 471 aa8.98□□□□□ -0.97
SMPD3-210ENST00000567811 ASTN2O75129 1339 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms