RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 ECE1P42892 770 aa14.11□□□□□ -0.15
CDH3-206ENST00000567674 FKBP1AP62942 108 aaKnown RBP14.11□□□□□ -0.15
CDH3-206ENST00000567674 DOK7Q18PE1 504 aa14.11□□□□□ -0.15
CDH3-206ENST00000567674 LMBR1LQ6UX01 489 aa14.11□□□□□ -0.15
CDH3-206ENST00000567674 SLC51AQ86UW1 340 aa14.11□□□□□ -0.15
CDH3-206ENST00000567674 SSH1Q8WYL5 1049 aa14.11□□□□□ -0.15
CDH3-206ENST00000567674 MCOLN1Q9GZU1 580 aa14.11□□□□□ -0.15
CDH3-206ENST00000567674 PITPNM2Q9BZ72 1349 aa14.11□□□□□ -0.15
CDH3-206ENST00000567674 CHRNDQ07001 517 aa14.1□□□□□ -0.15
CDH3-206ENST00000567674 SLC4A10Q6U841 1118 aa14.1□□□□□ -0.15
CDH3-206ENST00000567674 LDHAL6AQ6ZMR3 332 aa14.1□□□□□ -0.15
CDH3-206ENST00000567674 OGFOD1Q8N543 542 aa14.1□□□□□ -0.15
CDH3-206ENST00000567674 DCPSQ96C86 337 aaKnown RBP14.1□□□□□ -0.15
CDH3-206ENST00000567674 CCDC85AQ96PX6 553 aaPredicted RBP14.1□□□□□ -0.15
CDH3-206ENST00000567674 FBXO3Q9UK99 471 aa14.1□□□□□ -0.15
CDH3-206ENST00000567674 CA12O43570 354 aa14.09□□□□□ -0.15
CDH3-206ENST00000567674 USP17L8P0C7I0 530 aa14.09□□□□□ -0.15
CDH3-206ENST00000567674 HIRAP54198 1017 aaPredicted RBP14.09□□□□□ -0.15
CDH3-206ENST00000567674 UBE4AQ14139 1066 aa14.09□□□□□ -0.15
CDH3-206ENST00000567674 GPR101Q96P66 508 aaPredicted RBP14.09□□□□□ -0.15
CDH3-206ENST00000567674 API5Q9BZZ5 524 aaKnown RBP14.09□□□□□ -0.15
CDH3-206ENST00000567674 TLL2Q9Y6L7 1015 aa14.09□□□□□ -0.15
CDH3-206ENST00000567674 COL4A1P02462 1669 aa14.08□□□□□ -0.16
CDH3-206ENST00000567674 MAP2K2P36507 400 aa14.08□□□□□ -0.16
CDH3-206ENST00000567674 KCNJ4P48050 445 aa14.08□□□□□ -0.16
CDH3-206ENST00000567674 TAF7LQ5H9L4 462 aa14.08□□□□□ -0.16
CDH3-206ENST00000567674 CST9Q5W186 159 aa14.08□□□□□ -0.16
CDH3-206ENST00000567674 CAPNS2Q96L46 248 aa14.08□□□□□ -0.16
CDH3-206ENST00000567674 ZBTB12Q9Y330 459 aaPredicted RBP14.08□□□□□ -0.16
CDH3-206ENST00000567674 MROH5Q6ZUA9 1318 aa14.08□□□□□ -0.16
CDH3-206ENST00000567674 KIF16BQ96L93 1317 aa14.08□□□□□ -0.16
CDH3-206ENST00000567674 PSME4Q14997 1843 aa14.08□□□□□ -0.16
CDH3-206ENST00000567674 ZBTB22O15209 634 aa14.07□□□□□ -0.16
CDH3-206ENST00000567674 IPO8O15397 1037 aaKnown RBP14.07□□□□□ -0.16
CDH3-206ENST00000567674 IL1R1P14778 569 aa14.07□□□□□ -0.16
CDH3-206ENST00000567674 FKBP1BP68106 108 aa14.07□□□□□ -0.16
CDH3-206ENST00000567674 KIF4BQ2VIQ3 1234 aa14.07□□□□□ -0.16
CDH3-206ENST00000567674 DACT2Q5SW24 774 aa14.07□□□□□ -0.16
CDH3-206ENST00000567674 PRPF38BQ5VTL8 546 aaKnown RBP14.07□□□□□ -0.16
CDH3-206ENST00000567674 TTLL5Q6EMB2 1281 aa14.07□□□□□ -0.16
CDH3-206ENST00000567674 ZNF804AQ7Z570 1209 aa14.07□□□□□ -0.16
CDH3-206ENST00000567674 SMC4Q9NTJ3 1288 aa14.07□□□□□ -0.16
CDH3-206ENST00000567674 HDAC9Q9UKV0 1011 aa14.07□□□□□ -0.16
CDH3-206ENST00000567674 NBPF7P0C2Y1 421 aaPredicted RBP14.06□□□□□ -0.16
CDH3-206ENST00000567674 DIEXFQ68CQ4 756 aaKnown RBP14.06□□□□□ -0.16
CDH3-206ENST00000567674 SAPCD2Q86UD0 394 aa14.06□□□□□ -0.16
CDH3-206ENST00000567674 TRPM4Q8TD43 1214 aa14.06□□□□□ -0.16
CDH3-206ENST00000567674 CDCA7LQ96GN5 454 aa14.06□□□□□ -0.16
CDH3-206ENST00000567674 USP44Q9H0E7 712 aa14.06□□□□□ -0.16
CDH3-206ENST00000567674 CD209Q9NNX6 404 aa14.06□□□□□ -0.16
CDH3-206ENST00000567674 MYOZ2Q9NPC6 264 aa14.06□□□□□ -0.16
CDH3-206ENST00000567674 KCNQ5Q9NR82 932 aa14.06□□□□□ -0.16
CDH3-206ENST00000567674 CNNM1Q9NRU3 951 aa14.06□□□□□ -0.16
CDH3-206ENST00000567674 IRS2Q9Y4H2 1338 aa14.06□□□□□ -0.16
CDH3-206ENST00000567674 TRPM7Q96QT4 1865 aa14.06□□□□□ -0.16
CDH3-206ENST00000567674 SASH1O94885 1247 aa14.05□□□□□ -0.16
CDH3-206ENST00000567674 PAXIP1Q6ZW49 1069 aaPredicted RBP14.05□□□□□ -0.16
CDH3-206ENST00000567674 SAMD7Q7Z3H4 446 aa14.05□□□□□ -0.16
CDH3-206ENST00000567674 KRT26Q7Z3Y9 468 aa14.05□□□□□ -0.16
CDH3-206ENST00000567674 SULF1Q8IWU6 871 aa14.05□□□□□ -0.16
CDH3-206ENST00000567674 REM2Q8IYK8 340 aaPredicted RBP14.05□□□□□ -0.16
CDH3-206ENST00000567674 MTMR14Q8NCE2 650 aa14.05□□□□□ -0.16
CDH3-206ENST00000567674 KAZALD1Q96I82 304 aa14.05□□□□□ -0.16
CDH3-206ENST00000567674 SUCLG2Q96I99 432 aa14.05□□□□□ -0.16
CDH3-206ENST00000567674 RIPOR2Q9Y4F9 1068 aa14.05□□□□□ -0.16
CDH3-206ENST00000567674 CELF2O95319 508 aaKnown RBP14.04□□□□□ -0.16
CDH3-206ENST00000567674 RARSP54136 660 aaKnown RBP14.04□□□□□ -0.16
CDH3-206ENST00000567674 DGKZQ13574 1117 aa14.04□□□□□ -0.16
CDH3-206ENST00000567674 TBC1D10BQ4KMP7 808 aaPredicted RBP14.04□□□□□ -0.16
CDH3-206ENST00000567674 EPHA10Q5JZY3 1008 aa14.04□□□□□ -0.16
CDH3-206ENST00000567674 CYP4F22Q6NT55 531 aa14.04□□□□□ -0.16
CDH3-206ENST00000567674 TSKSQ9UJT2 592 aa14.04□□□□□ -0.16
CDH3-206ENST00000567674 CHMP3Q9Y3E7 222 aa14.04□□□□□ -0.16
CDH3-206ENST00000567674 UNCXA6NJT0 531 aa14.03□□□□□ -0.16
CDH3-206ENST00000567674 INTS3Q68E01 1043 aaKnown RBP14.03□□□□□ -0.16
CDH3-206ENST00000567674 TXNRD3Q86VQ6 643 aa14.03□□□□□ -0.16
CDH3-206ENST00000567674 C2orf69Q8N8R5 385 aa14.03□□□□□ -0.16
CDH3-206ENST00000567674 GLIS2Q9BZE0 524 aaPredicted RBP14.03□□□□□ -0.16
CDH3-206ENST00000567674 BICC1Q9H694 974 aaKnown RBP14.03□□□□□ -0.16
CDH3-206ENST00000567674 SCN9AQ15858 1988 aa14.03□□□□□ -0.16
CDH3-206ENST00000567674 FAM205AQ6ZU69 1335 aa14.02□□□□□ -0.17
CDH3-206ENST00000567674 PDE8BO95263 885 aa14.02□□□□□ -0.17
CDH3-206ENST00000567674 GRM1Q13255 1194 aa14.02□□□□□ -0.17
CDH3-206ENST00000567674 SCARF1Q14162 830 aa14.02□□□□□ -0.17
CDH3-206ENST00000567674 USP48Q86UV5 1035 aa14.02□□□□□ -0.17
CDH3-206ENST00000567674 CCDC102AQ96A19 550 aa14.02□□□□□ -0.17
CDH3-206ENST00000567674 MRIQ9BWK5 157 aa14.02□□□□□ -0.17
CDH3-206ENST00000567674 NOB1Q9ULX3 412 aaKnown RBP14.02□□□□□ -0.17
CDH3-206ENST00000567674 TRAF5O00463 557 aa14.01□□□□□ -0.17
CDH3-206ENST00000567674 CIAO1O76071 339 aa14.01□□□□□ -0.17
CDH3-206ENST00000567674 GNAI3P08754 354 aa14.01□□□□□ -0.17
CDH3-206ENST00000567674 HIBADHP31937 336 aaKnown RBP14.01□□□□□ -0.17
CDH3-206ENST00000567674 NOGQ13253 232 aa14.01□□□□□ -0.17
CDH3-206ENST00000567674 CAVIN4Q5BKX8 364 aa14.01□□□□□ -0.17
CDH3-206ENST00000567674 ANKRD44Q8N8A2 993 aa14.01□□□□□ -0.17
CDH3-206ENST00000567674 TDRD7Q8NHU6 1098 aaKnown RBP14.01□□□□□ -0.17
CDH3-206ENST00000567674 TBC1D22AQ8WUA7 517 aa14.01□□□□□ -0.17
CDH3-206ENST00000567674 SUGT1Q9Y2Z0 365 aa14.01□□□□□ -0.17
CDH3-206ENST00000567674 PPP2R3BQ9Y5P8 575 aa14.01□□□□□ -0.17
CDH3-206ENST00000567674 COL1A1P02452 1464 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms