RNA–Protein interactions for RNA: ENST00000567547.1

NEIL1-214, Transcript of nei like DNA glycosylase 1, human

TSL 2

Gene NEIL1, Length 725 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEIL1-214	ENST00000567547	CACNA1S	Q13698	1873 aa		13.59	□□□□□ -0.23
NEIL1-214	ENST00000567547	KIAA1551	Q9HCM1	1747 aa		13.59	□□□□□ -0.23
NEIL1-214	ENST00000567547	ZBTB7A	O95365	584 aa		13.59	□□□□□ -0.23
NEIL1-214	ENST00000567547	ATP2B4	P23634	1241 aa		13.59	□□□□□ -0.23
NEIL1-214	ENST00000567547	PHKA1	P46020	1223 aa		13.59	□□□□□ -0.23
NEIL1-214	ENST00000567547	DNAJC2	Q99543	621 aa	Known RBP	13.59	□□□□□ -0.23
NEIL1-214	ENST00000567547	PAG1	Q9NWQ8	432 aa		13.59	□□□□□ -0.23
NEIL1-214	ENST00000567547	IRS2	Q9Y4H2	1338 aa		13.59	□□□□□ -0.23
NEIL1-214	ENST00000567547	SEMA3E	O15041	775 aa		13.58	□□□□□ -0.24
NEIL1-214	ENST00000567547	MAP4K4	O95819	1239 aa	Predicted RBP	13.58	□□□□□ -0.24
NEIL1-214	ENST00000567547	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.58	□□□□□ -0.24
NEIL1-214	ENST00000567547	CAVIN4	Q5BKX8	364 aa		13.58	□□□□□ -0.24
NEIL1-214	ENST00000567547	KBTBD3	Q8NAB2	608 aa		13.58	□□□□□ -0.24
NEIL1-214	ENST00000567547	SGIP1	Q9BQI5	828 aa		13.58	□□□□□ -0.24
NEIL1-214	ENST00000567547	FSD1	Q9BTV5	496 aa		13.58	□□□□□ -0.24
NEIL1-214	ENST00000567547	GNL3L	Q9NVN8	582 aa	Known RBP	13.58	□□□□□ -0.24
NEIL1-214	ENST00000567547	ANKIB1	Q9P2G1	1089 aa		13.58	□□□□□ -0.24
NEIL1-214	ENST00000567547	GGA1	Q9UJY5	639 aa		13.58	□□□□□ -0.24
NEIL1-214	ENST00000567547	PDS5A	Q29RF7	1337 aa	Known RBP	13.58	□□□□□ -0.24
NEIL1-214	ENST00000567547	RAD50	Q92878	1312 aa		13.58	□□□□□ -0.24
NEIL1-214	ENST00000567547	DUOX1	Q9NRD9	1551 aa		13.58	□□□□□ -0.24
NEIL1-214	ENST00000567547	DOCK2	Q92608	1830 aa		13.57	□□□□□ -0.24
NEIL1-214	ENST00000567547	MYH7	P12883	1935 aa		13.57	□□□□□ -0.24
NEIL1-214	ENST00000567547	MYH13	Q9UKX3	1938 aa		13.57	□□□□□ -0.24
NEIL1-214	ENST00000567547	SNAP23	O00161	211 aa		13.57	□□□□□ -0.24
NEIL1-214	ENST00000567547	EPB41L2	O43491	1005 aa	Known RBP	13.57	□□□□□ -0.24
NEIL1-214	ENST00000567547	MCAM	P43121	646 aa		13.57	□□□□□ -0.24
NEIL1-214	ENST00000567547	GPSM2	P81274	684 aa		13.57	□□□□□ -0.24
NEIL1-214	ENST00000567547	TTF1	Q15361	905 aa	Predicted RBP	13.57	□□□□□ -0.24
NEIL1-214	ENST00000567547	FBXO33	Q7Z6M2	555 aa		13.57	□□□□□ -0.24
NEIL1-214	ENST00000567547	RUFY2	Q8WXA3	655 aa		13.57	□□□□□ -0.24
NEIL1-214	ENST00000567547	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
NEIL1-214	ENST00000567547	ESYT1	Q9BSJ8	1104 aa		13.57	□□□□□ -0.24
NEIL1-214	ENST00000567547	TMX4	Q9H1E5	349 aa	Predicted RBP	13.57	□□□□□ -0.24
NEIL1-214	ENST00000567547	DIAPH3	Q9NSV4	1193 aa		13.57	□□□□□ -0.24
NEIL1-214	ENST00000567547	MED23	Q9ULK4	1368 aa		13.57	□□□□□ -0.24
NEIL1-214	ENST00000567547	SLX4	Q8IY92	1834 aa		13.56	□□□□□ -0.24
NEIL1-214	ENST00000567547	GOLIM4	O00461	696 aa		13.56	□□□□□ -0.24
NEIL1-214	ENST00000567547	REC8	O95072	547 aa		13.56	□□□□□ -0.24
NEIL1-214	ENST00000567547	CHRNA5	P30532	468 aa		13.56	□□□□□ -0.24
NEIL1-214	ENST00000567547	TGFB2	P61812	414 aa		13.56	□□□□□ -0.24
NEIL1-214	ENST00000567547	RASGRF1	Q13972	1273 aa		13.56	□□□□□ -0.24
NEIL1-214	ENST00000567547	SCARF1	Q14162	830 aa		13.56	□□□□□ -0.24
NEIL1-214	ENST00000567547	CC2D2B	Q6DHV5	1058 aa		13.56	□□□□□ -0.24
NEIL1-214	ENST00000567547	PRPF40B	Q6NWY9	871 aa	Known RBP	13.56	□□□□□ -0.24
NEIL1-214	ENST00000567547	ILDR2	Q71H61	639 aa		13.56	□□□□□ -0.24
NEIL1-214	ENST00000567547	FAM84B	Q96KN1	310 aa	Predicted RBP	13.56	□□□□□ -0.24
NEIL1-214	ENST00000567547	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.56	□□□□□ -0.24
NEIL1-214	ENST00000567547	UFL1	O94874	794 aa		13.55	□□□□□ -0.24
NEIL1-214	ENST00000567547	SEC24B	O95487	1268 aa		13.55	□□□□□ -0.24
NEIL1-214	ENST00000567547	ZFY	P08048	801 aa	Predicted RBP	13.55	□□□□□ -0.24
NEIL1-214	ENST00000567547	HIBADH	P31937	336 aa	Known RBP	13.55	□□□□□ -0.24
NEIL1-214	ENST00000567547	ZAP70	P43403	619 aa		13.55	□□□□□ -0.24
NEIL1-214	ENST00000567547	BCAM	P50895	628 aa		13.55	□□□□□ -0.24
NEIL1-214	ENST00000567547	MFAP1	P55081	439 aa	Known RBP	13.55	□□□□□ -0.24
NEIL1-214	ENST00000567547	GRIPAP1	Q4V328	841 aa		13.55	□□□□□ -0.24
NEIL1-214	ENST00000567547	VPS37D	Q86XT2	251 aa		13.55	□□□□□ -0.24
NEIL1-214	ENST00000567547	SPATA5	Q8NB90	893 aa		13.55	□□□□□ -0.24
NEIL1-214	ENST00000567547	EDC3	Q96F86	508 aa	Known RBP	13.55	□□□□□ -0.24
NEIL1-214	ENST00000567547	SNRK	Q9NRH2	765 aa		13.55	□□□□□ -0.24
NEIL1-214	ENST00000567547	HMG20B	Q9P0W2	317 aa		13.55	□□□□□ -0.24
NEIL1-214	ENST00000567547	DENND2A	Q9ULE3	1009 aa		13.55	□□□□□ -0.24
NEIL1-214	ENST00000567547	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.55	□□□□□ -0.24
NEIL1-214	ENST00000567547	SNED1	Q8TER0	1413 aa		13.55	□□□□□ -0.24
NEIL1-214	ENST00000567547	BRCA1	P38398	1863 aa	Known RBP	13.55	□□□□□ -0.24
NEIL1-214	ENST00000567547	PSD	A5PKW4	1024 aa	Predicted RBP	13.54	□□□□□ -0.24
NEIL1-214	ENST00000567547	SGSM2	O43147	1006 aa		13.54	□□□□□ -0.24
NEIL1-214	ENST00000567547	IGSF3	O75054	1194 aa		13.54	□□□□□ -0.24
NEIL1-214	ENST00000567547	GYG1	P46976	350 aa		13.54	□□□□□ -0.24
NEIL1-214	ENST00000567547	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
NEIL1-214	ENST00000567547	ZNF804A	Q7Z570	1209 aa		13.54	□□□□□ -0.24
NEIL1-214	ENST00000567547	MPND	Q8N594	471 aa		13.54	□□□□□ -0.24
NEIL1-214	ENST00000567547	TBC1D16	Q8TBP0	767 aa		13.54	□□□□□ -0.24
NEIL1-214	ENST00000567547	RBM19	Q9Y4C8	960 aa	Known RBP	13.54	□□□□□ -0.24
NEIL1-214	ENST00000567547	CD2AP	Q9Y5K6	639 aa		13.54	□□□□□ -0.24
NEIL1-214	ENST00000567547	COL1A1	P02452	1464 aa	Predicted RBP	13.54	□□□□□ -0.24
NEIL1-214	ENST00000567547	KLRK1	P26718	216 aa		13.53	□□□□□ -0.24
NEIL1-214	ENST00000567547	PTGER2	P43116	358 aa		13.53	□□□□□ -0.24
NEIL1-214	ENST00000567547	ZSCAN25	Q6NSZ9	544 aa		13.53	□□□□□ -0.24
NEIL1-214	ENST00000567547	TTLL6	Q8N841	843 aa		13.53	□□□□□ -0.24
NEIL1-214	ENST00000567547	C7orf43	Q8WVR3	580 aa		13.53	□□□□□ -0.24
NEIL1-214	ENST00000567547	TBC1D32	Q96NH3	1257 aa		13.53	□□□□□ -0.24
NEIL1-214	ENST00000567547	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.53	□□□□□ -0.24	4e-6	■■■□□ 18.8
NEIL1-214	ENST00000567547	ANTXR1	Q9H6X2	564 aa		13.53	□□□□□ -0.24
NEIL1-214	ENST00000567547	NDUFB9	Q9Y6M9	179 aa		13.53	□□□□□ -0.24
NEIL1-214	ENST00000567547	MAST2	Q6P0Q8	1798 aa		13.53	□□□□□ -0.24
NEIL1-214	ENST00000567547	WTIP	A6NIX2	430 aa	Predicted RBP	13.52	□□□□□ -0.25
NEIL1-214	ENST00000567547	CYP2E1	P05181	493 aa	Predicted RBP	13.52	□□□□□ -0.25
NEIL1-214	ENST00000567547	DPEP1	P16444	411 aa		13.52	□□□□□ -0.25
NEIL1-214	ENST00000567547	RBM25	P49756	843 aa	Known RBP	13.52	□□□□□ -0.25
NEIL1-214	ENST00000567547	NMI	Q13287	307 aa	Predicted RBP	13.52	□□□□□ -0.25
NEIL1-214	ENST00000567547	TMED8	Q6PL24	325 aa	Predicted RBP	13.52	□□□□□ -0.25
NEIL1-214	ENST00000567547	PI16	Q6UXB8	463 aa		13.52	□□□□□ -0.25
NEIL1-214	ENST00000567547	DPP8	Q6V1X1	898 aa	Predicted RBP	13.52	□□□□□ -0.25
NEIL1-214	ENST00000567547	SLC51A	Q86UW1	340 aa		13.52	□□□□□ -0.25
NEIL1-214	ENST00000567547	EYA3	Q99504	573 aa		13.52	□□□□□ -0.25
NEIL1-214	ENST00000567547	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.52	□□□□□ -0.25
NEIL1-214	ENST00000567547	POLL	Q9UGP5	575 aa		13.52	□□□□□ -0.25
NEIL1-214	ENST00000567547	SALL1	Q9NSC2	1324 aa		13.51	□□□□□ -0.25
NEIL1-214	ENST00000567547	RNF113A	O15541	343 aa	Known RBP	13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms