RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 KLHL10Q6JEL2 608 aa6.9□□□□□ -1.3
CNOT1-211ENST00000567188 FAM89AQ96GI7 184 aa6.9□□□□□ -1.3
CNOT1-211ENST00000567188 FAM184BQ9ULE4 1060 aa6.9□□□□□ -1.3
CNOT1-211ENST00000567188 TRIM21P19474 475 aaKnown RBP6.9□□□□□ -1.31
CNOT1-211ENST00000567188 NOLC1Q14978 699 aaKnown RBP eCLIP6.9□□□□□ -1.312e-6■■■□□ 15.5
CNOT1-211ENST00000567188 SYCP1Q15431 976 aa6.9□□□□□ -1.31
CNOT1-211ENST00000567188 ZSCAN29Q8IWY8 852 aaPredicted RBP6.9□□□□□ -1.31
CNOT1-211ENST00000567188 CNTROBQ8N137 903 aa6.9□□□□□ -1.31
CNOT1-211ENST00000567188 PIK3R4Q99570 1358 aa6.9□□□□□ -1.31
CNOT1-211ENST00000567188 PIK3C2AO00443 1686 aa6.9□□□□□ -1.31
CNOT1-211ENST00000567188 TRIM27P14373 513 aa6.9□□□□□ -1.31
CNOT1-211ENST00000567188 BAG6P46379 1132 aa6.9□□□□□ -1.31
CNOT1-211ENST00000567188 ZBTB17Q13105 803 aa6.9□□□□□ -1.31
CNOT1-211ENST00000567188 ANKRD13DQ6ZTN6 518 aa6.9□□□□□ -1.31
CNOT1-211ENST00000567188 CRB1P82279 1406 aa6.9□□□□□ -1.31
CNOT1-211ENST00000567188 SPATA31A1Q5TZJ5 1347 aa6.9□□□□□ -1.31
CNOT1-211ENST00000567188 CCDC172P0C7W6 258 aa6.9□□□□□ -1.31
CNOT1-211ENST00000567188 DDX46Q7L014 1031 aaKnown RBP6.9□□□□□ -1.31
CNOT1-211ENST00000567188 PPP1R42Q7Z4L9 355 aa6.9□□□□□ -1.31
CNOT1-211ENST00000567188 BICD2Q8TD16 824 aa6.9□□□□□ -1.31
CNOT1-211ENST00000567188 RBM17Q96I25 401 aaKnown RBP6.9□□□□□ -1.31
CNOT1-211ENST00000567188 LARP6Q9BRS8 491 aaKnown RBP6.9□□□□□ -1.31
CNOT1-211ENST00000567188 SNRKQ9NRH2 765 aa6.9□□□□□ -1.31
CNOT1-211ENST00000567188 SMC3Q9UQE7 1217 aa6.9□□□□□ -1.31
CNOT1-211ENST00000567188 EBAG9O00559 213 aa6.89□□□□□ -1.31
CNOT1-211ENST00000567188 SPECC1LQ69YQ0 1117 aa6.89□□□□□ -1.31
CNOT1-211ENST00000567188 OLFM4Q6UX06 510 aa6.89□□□□□ -1.31
CNOT1-211ENST00000567188 NFXL1Q6ZNB6 911 aa6.89□□□□□ -1.31
CNOT1-211ENST00000567188 ZNHIT6Q9NWK9 470 aaKnown RBP6.89□□□□□ -1.31
CNOT1-211ENST00000567188 MED14O60244 1454 aa6.89□□□□□ -1.31
CNOT1-211ENST00000567188 CASQ1P31415 396 aa6.89□□□□□ -1.31
CNOT1-211ENST00000567188 ERFEQ4G0M1 354 aa6.89□□□□□ -1.31
CNOT1-211ENST00000567188 CCDC83Q8IWF9 413 aa6.89□□□□□ -1.31
CNOT1-211ENST00000567188 RPUSD2Q8IZ73 545 aaKnown RBP6.89□□□□□ -1.31
CNOT1-211ENST00000567188 BOLA2Q9H3K6 86 aa6.89□□□□□ -1.31
CNOT1-211ENST00000567188 IQSEC2Q5JU85 1478 aa6.89□□□□□ -1.31
CNOT1-211ENST00000567188 IRS4O14654 1257 aaPredicted RBP6.89□□□□□ -1.31
CNOT1-211ENST00000567188 PEAK1Q9H792 1746 aa6.89□□□□□ -1.31
CNOT1-211ENST00000567188 STK3Q13188 491 aa6.89□□□□□ -1.31
CNOT1-211ENST00000567188 PICALMQ13492 652 aa6.89□□□□□ -1.31
CNOT1-211ENST00000567188 ABCF2Q9UG63 623 aa6.89□□□□□ -1.31
CNOT1-211ENST00000567188 STRCQ7RTU9 1775 aa6.89□□□□□ -1.31
CNOT1-211ENST00000567188 EIF5P55010 431 aaKnown RBP6.89□□□□□ -1.31
CNOT1-211ENST00000567188 SATB1Q01826 763 aa6.89□□□□□ -1.31
CNOT1-211ENST00000567188 CWC27Q6UX04 472 aaKnown RBP6.89□□□□□ -1.31
CNOT1-211ENST00000567188 FAM196AQ6ZSG2 479 aa6.89□□□□□ -1.31
CNOT1-211ENST00000567188 MEIS3Q99687 375 aa6.89□□□□□ -1.31
CNOT1-211ENST00000567188 CARD10Q9BWT7 1032 aa6.89□□□□□ -1.31
CNOT1-211ENST00000567188 DACH1Q9UI36 760 aa6.89□□□□□ -1.31
CNOT1-211ENST00000567188 XBP1P17861 261 aa6.89□□□□□ -1.31
CNOT1-211ENST00000567188 MICALL1Q8N3F8 863 aa6.89□□□□□ -1.31
CNOT1-211ENST00000567188 CTCFLQ8NI51 663 aaPredicted RBP6.89□□□□□ -1.31
CNOT1-211ENST00000567188 NDUFB9Q9Y6M9 179 aa6.89□□□□□ -1.31
CNOT1-211ENST00000567188 NRKQ7Z2Y5 1582 aa6.89□□□□□ -1.31
CNOT1-211ENST00000567188 INSRP06213 1382 aa6.89□□□□□ -1.31
CNOT1-211ENST00000567188 ARHGAP25P42331 645 aa6.88□□□□□ -1.31
CNOT1-211ENST00000567188 HDAC1Q13547 482 aaPredicted RBP6.88□□□□□ -1.31
CNOT1-211ENST00000567188 SAFBQ15424 915 aaKnown RBP eCLIP6.88□□□□□ -1.31
CNOT1-211ENST00000567188 DZIP1Q86YF9 867 aaKnown RBP6.88□□□□□ -1.31
CNOT1-211ENST00000567188 RRAGDQ9NQL2 400 aaPredicted RBP6.88□□□□□ -1.31
CNOT1-211ENST00000567188 DBF4Q9UBU7 674 aaPredicted RBP6.88□□□□□ -1.31
CNOT1-211ENST00000567188 SSH2Q76I76 1423 aa6.88□□□□□ -1.31
CNOT1-211ENST00000567188 PNPLA6Q8IY17 1366 aa6.88□□□□□ -1.31
CNOT1-211ENST00000567188 IGHDP01880 384 aa6.88□□□□□ -1.31
CNOT1-211ENST00000567188 LINC00116Q8NCU8 138 aa6.88□□□□□ -1.31
CNOT1-211ENST00000567188 DNAI2Q9GZS0 605 aa6.88□□□□□ -1.31
CNOT1-211ENST00000567188 VGLL3A8MV65 326 aa6.88□□□□□ -1.31
CNOT1-211ENST00000567188 PPFIA3O75145 1194 aa6.88□□□□□ -1.31
CNOT1-211ENST00000567188 IFIT5Q13325 482 aaKnown RBP6.88□□□□□ -1.31
CNOT1-211ENST00000567188 ZKSCAN8Q15776 578 aaPredicted RBP6.88□□□□□ -1.31
CNOT1-211ENST00000567188 CCDC148Q8NFR7 591 aa6.88□□□□□ -1.31
CNOT1-211ENST00000567188 GEMIN8Q9NWZ8 242 aaKnown RBP6.88□□□□□ -1.31
CNOT1-211ENST00000567188 BCS1LQ9Y276 419 aa6.88□□□□□ -1.31
CNOT1-211ENST00000567188 DOK7Q18PE1 504 aa6.88□□□□□ -1.31
CNOT1-211ENST00000567188 ARHGAP27Q6ZUM4 889 aa6.88□□□□□ -1.31
CNOT1-211ENST00000567188 IDH1O75874 414 aaKnown RBP6.88□□□□□ -1.31
CNOT1-211ENST00000567188 TFCP2Q12800 502 aa6.88□□□□□ -1.31
CNOT1-211ENST00000567188 PRKG1Q13976 671 aa6.88□□□□□ -1.31
CNOT1-211ENST00000567188 SAP30BPQ9UHR5 308 aaKnown RBP6.88□□□□□ -1.31
CNOT1-211ENST00000567188 USP32Q8NFA0 1604 aa6.88□□□□□ -1.31
CNOT1-211ENST00000567188 GRIPAP1Q4V328 841 aa6.88□□□□□ -1.31
CNOT1-211ENST00000567188 B4GALNT4Q76KP1 1039 aa6.88□□□□□ -1.31
CNOT1-211ENST00000567188 ZNF500O60304 480 aaPredicted RBP6.87□□□□□ -1.31
CNOT1-211ENST00000567188 SLU7O95391 586 aaKnown RBP6.87□□□□□ -1.31
CNOT1-211ENST00000567188 CLNS1AP54105 237 aaKnown RBP6.87□□□□□ -1.31
CNOT1-211ENST00000567188 EIF4A1P60842 406 aaKnown RBP6.87□□□□□ -1.31
CNOT1-211ENST00000567188 SMC1AQ14683 1233 aaKnown RBP6.87□□□□□ -1.31
CNOT1-211ENST00000567188 LMNTD2Q8IXW0 634 aa6.87□□□□□ -1.31
CNOT1-211ENST00000567188 CEP57L1Q8IYX8 460 aa6.87□□□□□ -1.31
CNOT1-211ENST00000567188 NBPF3Q9H094 633 aa6.87□□□□□ -1.31
CNOT1-211ENST00000567188 JMYQ8N9B5 988 aa6.87□□□□□ -1.31
CNOT1-211ENST00000567188 TRERF1Q96PN7 1200 aa6.87□□□□□ -1.31
CNOT1-211ENST00000567188 CEP83Q9Y592 693 aa6.87□□□□□ -1.31
CNOT1-211ENST00000567188 USP16Q9Y5T5 823 aa6.87□□□□□ -1.31
CNOT1-211ENST00000567188 ATP8B1O43520 1251 aa6.87□□□□□ -1.31
CNOT1-211ENST00000567188 GBP7Q8N8V2 638 aaPredicted RBP6.87□□□□□ -1.31
CNOT1-211ENST00000567188 DRC1Q96MC2 740 aa6.87□□□□□ -1.31
CNOT1-211ENST00000567188 ATG3Q9NT62 314 aa6.87□□□□□ -1.31
CNOT1-211ENST00000567188 MON2Q7Z3U7 1717 aa6.87□□□□□ -1.31
CNOT1-211ENST00000567188 IKQ13123 557 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms