RNA–Protein interactions for RNA: ENST00000567138.2

SPG7-216, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 1,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-216ENST00000567138 USP17L3A6NCW0 530 aa14.57□□□□□ -0.08
SPG7-216ENST00000567138 USP17L4A6NCW7 530 aa14.57□□□□□ -0.08
SPG7-216ENST00000567138 WTIPA6NIX2 430 aaPredicted RBP14.57□□□□□ -0.08
SPG7-216ENST00000567138 ANP32CO43423 234 aa14.57□□□□□ -0.08
SPG7-216ENST00000567138 PDE8AO60658 829 aa14.57□□□□□ -0.08
SPG7-216ENST00000567138 NBPF9Q3BBW0 867 aa14.57□□□□□ -0.08
SPG7-216ENST00000567138 USP17L1Q7RTZ2 530 aa14.57□□□□□ -0.08
SPG7-216ENST00000567138 ANKRD18AQ8IVF6 992 aa14.57□□□□□ -0.08
SPG7-216ENST00000567138 FBXW7Q969H0 707 aa14.57□□□□□ -0.08
SPG7-216ENST00000567138 RUNDC1Q96C34 613 aa14.57□□□□□ -0.08
SPG7-216ENST00000567138 MXD3Q9BW11 206 aa14.57□□□□□ -0.08
SPG7-216ENST00000567138 MBIPQ9NS73 344 aa14.57□□□□□ -0.08
SPG7-216ENST00000567138 A0A1B0GUL6 1792 aa14.56□□□□□ -0.08
SPG7-216ENST00000567138 PCCAP05165 728 aaPredicted RBP14.56□□□□□ -0.08
SPG7-216ENST00000567138 ATP2B4P23634 1241 aa14.56□□□□□ -0.08
SPG7-216ENST00000567138 PKN2Q16513 984 aaKnown RBP14.56□□□□□ -0.08
SPG7-216ENST00000567138 MYBBP1AQ9BQG0 1328 aaKnown RBP14.55□□□□□ -0.08
SPG7-216ENST00000567138 GPR25O00155 361 aa14.55□□□□□ -0.08
SPG7-216ENST00000567138 HSP90B1P14625 803 aaKnown RBP14.55□□□□□ -0.08
SPG7-216ENST00000567138 DIEXFQ68CQ4 756 aaKnown RBP14.55□□□□□ -0.08
SPG7-216ENST00000567138 CWC25Q9NXE8 425 aaPredicted RBP14.55□□□□□ -0.08
SPG7-216ENST00000567138 TAOK2Q9UL54 1235 aa14.55□□□□□ -0.08
SPG7-216ENST00000567138 MED23Q9ULK4 1368 aa14.55□□□□□ -0.08
SPG7-216ENST00000567138 RBBP6Q7Z6E9 1792 aaKnown RBP14.55□□□□□ -0.08
SPG7-216ENST00000567138 ELL2O00472 640 aaPredicted RBP14.54□□□□□ -0.08
SPG7-216ENST00000567138 SASH1O94885 1247 aa14.54□□□□□ -0.08
SPG7-216ENST00000567138 PRKG1Q13976 671 aa14.54□□□□□ -0.08
SPG7-216ENST00000567138 WDR43Q15061 677 aaKnown RBP eCLIP14.54□□□□□ -0.08
SPG7-216ENST00000567138 FBXO46Q6PJ61 603 aaPredicted RBP14.54□□□□□ -0.08
SPG7-216ENST00000567138 PODNQ7Z5L7 613 aa14.54□□□□□ -0.08
SPG7-216ENST00000567138 CCDC191Q8NCU4 936 aa14.54□□□□□ -0.08
SPG7-216ENST00000567138 NF2P35240 595 aa14.53□□□□□ -0.08
SPG7-216ENST00000567138 TM4SF4P48230 202 aa14.53□□□□□ -0.08
SPG7-216ENST00000567138 DACT2Q5SW24 774 aa14.53□□□□□ -0.08
SPG7-216ENST00000567138 R3HDMLQ9H3Y0 253 aa14.53□□□□□ -0.08
SPG7-216ENST00000567138 OTOFQ9HC10 1997 aa14.52□□□□□ -0.08
SPG7-216ENST00000567138 WNT10BO00744 389 aa14.52□□□□□ -0.08
SPG7-216ENST00000567138 CTSWP56202 376 aa14.52□□□□□ -0.08
SPG7-216ENST00000567138 PTPN12Q05209 780 aaKnown RBP14.52□□□□□ -0.08
SPG7-216ENST00000567138 CDC5LQ99459 802 aaKnown RBP14.52□□□□□ -0.08
SPG7-216ENST00000567138 FKTNO75072 461 aa14.51□□□□□ -0.09
SPG7-216ENST00000567138 SREBF2Q12772 1141 aa14.51□□□□□ -0.09
SPG7-216ENST00000567138 OGFOD1Q8N543 542 aa14.51□□□□□ -0.09
SPG7-216ENST00000567138 METTL22Q9BUU2 404 aaPredicted RBP14.51□□□□□ -0.09
SPG7-216ENST00000567138 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.51□□□□□ -0.09
SPG7-216ENST00000567138 FZD1Q9UP38 647 aa14.51□□□□□ -0.09
SPG7-216ENST00000567138 KIAA0100Q14667 2235 aaKnown RBP14.51□□□□□ -0.09
SPG7-216ENST00000567138 ZNF853P0CG23 659 aa14.5□□□□□ -0.09
SPG7-216ENST00000567138 CCT4P50991 539 aaKnown RBP14.5□□□□□ -0.09
SPG7-216ENST00000567138 NOM1Q5C9Z4 860 aaKnown RBP14.5□□□□□ -0.09
SPG7-216ENST00000567138 ARMC9Q7Z3E5 817 aa14.5□□□□□ -0.09
SPG7-216ENST00000567138 GREM2Q9H772 168 aa14.5□□□□□ -0.09
SPG7-216ENST00000567138 MINPP1Q9UNW1 487 aa14.5□□□□□ -0.09
SPG7-216ENST00000567138 ADAMTS8Q9UP79 889 aa14.5□□□□□ -0.09
SPG7-216ENST00000567138 MYO3BQ8WXR4 1341 aa14.5□□□□□ -0.09
SPG7-216ENST00000567138 HTTP42858 3142 aa14.49□□□□□ -0.09
SPG7-216ENST00000567138 TXNRD3Q86VQ6 643 aa14.49□□□□□ -0.09
SPG7-216ENST00000567138 ANGEL1Q9UNK9 670 aaKnown RBP14.49□□□□□ -0.09
SPG7-216ENST00000567138 MAP3K2Q9Y2U5 619 aa14.49□□□□□ -0.09
SPG7-216ENST00000567138 SSC5DA1L4H1 1573 aa14.49□□□□□ -0.09
SPG7-216ENST00000567138 DDX58O95786 925 aaKnown RBP14.48□□□□□ -0.09
SPG7-216ENST00000567138 KLRK1P26718 216 aa14.48□□□□□ -0.09
SPG7-216ENST00000567138 STRIP1Q5VSL9 837 aa14.48□□□□□ -0.09
SPG7-216ENST00000567138 SPRYD7Q5W111 196 aa14.48□□□□□ -0.09
SPG7-216ENST00000567138 APOBEC3FQ8IUX4 373 aaKnown RBP14.48□□□□□ -0.09
SPG7-216ENST00000567138 KIAA0825Q8IV33 1275 aa14.48□□□□□ -0.09
SPG7-216ENST00000567138 C8orf58Q8NAV2 365 aa14.48□□□□□ -0.09
SPG7-216ENST00000567138 TTLL11Q8NHH1 800 aa14.48□□□□□ -0.09
SPG7-216ENST00000567138 COA1Q9GZY4 146 aa14.48□□□□□ -0.09
SPG7-216ENST00000567138 BSDC1Q9NW68 430 aaPredicted RBP14.48□□□□□ -0.09
SPG7-216ENST00000567138 COL1A1P02452 1464 aaPredicted RBP14.48□□□□□ -0.09
SPG7-216ENST00000567138 IGKV5-2P06315 115 aa14.47□□□□□ -0.09
SPG7-216ENST00000567138 CFHR5Q9BXR6 569 aa14.47□□□□□ -0.09
SPG7-216ENST00000567138 IFT57Q9NWB7 429 aa14.47□□□□□ -0.09
SPG7-216ENST00000567138 TRIM17Q9Y577 477 aa14.47□□□□□ -0.09
SPG7-216ENST00000567138 GNAI1P63096 354 aa14.47□□□□□ -0.09
SPG7-216ENST00000567138 LDLRAD1Q5T700 205 aa14.47□□□□□ -0.09
SPG7-216ENST00000567138 TTLL5Q6EMB2 1281 aa14.47□□□□□ -0.09
SPG7-216ENST00000567138 POTEFA5A3E0 1075 aa14.46□□□□□ -0.1
SPG7-216ENST00000567138 GTF2IP78347 998 aa14.46□□□□□ -0.1
SPG7-216ENST00000567138 CWF19L2Q2TBE0 894 aaKnown RBP14.46□□□□□ -0.1
SPG7-216ENST00000567138 CCDC184Q52MB2 194 aa14.46□□□□□ -0.1
SPG7-216ENST00000567138 CCDC30Q5VVM6 783 aa14.46□□□□□ -0.1
SPG7-216ENST00000567138 ZBED3Q96IU2 234 aaPredicted RBP14.46□□□□□ -0.1
SPG7-216ENST00000567138 CLMNQ96JQ2 1002 aa14.46□□□□□ -0.1
SPG7-216ENST00000567138 CACNA1FO60840 1977 aa14.45□□□□□ -0.1
SPG7-216ENST00000567138 PI4KAP2A4QPH2 592 aa14.45□□□□□ -0.1
SPG7-216ENST00000567138 APAF1O14727 1248 aa14.45□□□□□ -0.1
SPG7-216ENST00000567138 IGHMBP2P38935 993 aaKnown RBP14.45□□□□□ -0.1
SPG7-216ENST00000567138 OTOP1Q7RTM1 612 aa14.45□□□□□ -0.1
SPG7-216ENST00000567138 UBE3BQ7Z3V4 1068 aa14.45□□□□□ -0.1
SPG7-216ENST00000567138 IFNL1Q8IU54 200 aa14.45□□□□□ -0.1
SPG7-216ENST00000567138 TSPYL6Q8N831 410 aa14.45□□□□□ -0.1
SPG7-216ENST00000567138 PI4KAP1Q8N8J0 262 aa14.45□□□□□ -0.1
SPG7-216ENST00000567138 GCC1Q96CN9 775 aa14.45□□□□□ -0.1
SPG7-216ENST00000567138 WNK4Q96J92 1243 aa14.45□□□□□ -0.1
SPG7-216ENST00000567138 FBXO3Q9UK99 471 aa14.45□□□□□ -0.1
SPG7-216ENST00000567138 LEMD3Q9Y2U8 911 aa14.45□□□□□ -0.1
SPG7-216ENST00000567138 PCDHAC2Q9Y5I4 1007 aa14.45□□□□□ -0.1
SPG7-216ENST00000567138 ZNF804BA4D1E1 1349 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms